Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64120045 | . | C | A | CCDS625.1:NM_002633.2:c.1507Cga>Aga_NP_002624.2:p.503R>R | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
|---|---|---|---|---|---|---|---|
|
|
|
|
|
PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | ARG | A:526 | A:503 | 36.0 | 0.16 | E | -131.7 | 145.7 | 36.0 | 0.16 | 0.0 |
SO4 GOL HOH |
2.861 4.023 3.055 |
NH1 NH1 NH2 |
O4 O2 O |
||
| ARG | B:526 | B:503 | 40.0 | 0.178 | E | -135.8 | 150.9 | NA | NA | NA | |||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | ARG | A:526 | B:503 | 33.0 | 0.147 | E | -135.2 | 149.5 | 33.0 | 0.147 | 0.0 |
G6P HOH |
2.698 2.871 |
NH1 NE |
O3P O |
||
| ARG | B:526 | A:503 | 33.0 | 0.147 | E | -138.2 | 152.3 | NA | NA | NA | |||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ARG | A:526 | A:503 | 43.0 | 0.191 | E | -131.9 | 143.4 | 43.0 | 0.191 | 0.0 |
SO4 SO4 HOH |
8.097 7.254 3.494 |
NH2 NH1 NH2 |
O4 O3 O |
||
| ARG | B:526 | B:503 | 60.0 | 0.267 | E | -134.2 | 150.0 | NA | NA | NA | |||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | ARG | A:526 | A:503 | 38.0 | 0.169 | E | -130.8 | 144.4 | 38.0 | 0.169 | 0.0 |
SO4 HOH |
2.734 3.307 |
NH1 NH2 |
O4 O |
||
| ARG | B:526 | B:503 | 37.0 | 0.164 | E | -132.7 | 159.2 | NA | NA | NA | |||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | GLN | A:505 | A:503 | 12.0 | 0.067 | E | -128.9 | 150.6 | 12.0 | 0.067 | 0.0 |
SO4 SO4 HOH |
9.992 5.982 2.615 |
OE1 OE1 OE1 |
O4 O4 O |
||
| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | GLN | B:505 | B:503 | 17.0 | 0.094 | E | -132.6 | 149.5 | NA | NA | NA | ||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ARG | A:503 | A:503 | 39.0 | 0.173 | E | -134.6 | 154.7 | 39.0 | 0.173 | 0.0 |
SO4 SO4 HOH |
2.725 9.792 6.011 |
NH1 NH2 NH1 |
O4 O2 O |
||
| ARG | B:503 | B:503 | 33.0 | 0.147 | E | -136.7 | 158.9 | NA | NA | NA | |||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ARG | A:503 | A:503 | 44.0 | 0.196 | E | -136.9 | 148.8 | 44.0 | 0.196 | 0.0 |
SO4 HOH |
8.777 3.890 |
NH1 CA |
O4 O |
||
| ARG | B:503 | B:503 | 36.0 | 0.16 | E | -142.6 | 154.4 | NA | NA | NA | |||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ARG | A:526 | A:503 | 42.0 | 0.187 | E | -140.4 | 155.6 | 42.0 | 0.187 | 0.0 |
SO4 GOL HOH |
2.347 8.521 3.089 |
NH2 NH2 NH1 |
O3 O1 O |
||
| ARG | B:526 | B:503 | 31.0 | 0.138 | E | -140.4 | 148.0 | NA | NA | NA | |||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ARG | A:526 | A:503 | 32.0 | 0.142 | E | -129.3 | 149.6 | 32.0 | 0.142 | 0.0 |
SO4 HOH |
2.714 3.018 |
NH1 NE |
O4 O |
||
| ARG | B:526 | B:503 | 30.0 | 0.133 | E | -134.5 | 149.9 | NA | NA | NA | |||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ARG | A:526 | A:503 | 41.0 | 0.182 | E | -134.6 | 149.4 | 41.0 | 0.182 | 0.0 |
SO4 HOH |
2.444 2.998 |
NH2 NH2 |
O3 O |
||
| ARG | B:526 | B:503 | 31.0 | 0.138 | E | -139.4 | 158.4 | NA | NA | NA | |||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ARG | A:526 | A:503 | 44.0 | 0.196 | E | -128.7 | 150.8 | 44.0 | 0.196 | 0.0 |
SO4 GOL GOL GOL HOH |
4.690 7.450 4.971 3.007 2.811 |
NH2 NH2 C NH1 NH2 |
O3 O1 O2 O3 O |
||
| ARG | B:526 | B:503 | 41.0 | 0.182 | E | -132.0 | 148.8 | NA | NA | NA | |||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | ARG | A:502 | A:502 | 50.0 | 0.222 | E | -122.6 | 91.3 | 50.0 | 0.222 | 0.0 |
G16 HOH |
3.354 5.583 |
NH2 CA |
O2X O |
||
| ARG | B:502 | B:502 | 42.0 | 0.187 | E | -132.2 | 120.3 | 42.0 | 0.187 | 0.0 |
HOH |
4.096 |
NH1 |
O |
|||||||||
| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | ARG | A:502 | A:502 | 56.0 | 0.249 | E | -86.5 | 105.1 | 56.0 | 0.249 | 0.0 |
VG1 HOH |
4.282 3.799 |
NH1 CD |
OP2 O |
||
| ARG | B:502 | B:502 | 42.0 | 0.187 | E | -133.9 | 133.1 | 42.0 | 0.187 | 0.0 |
HOH |
3.519 |
NE |
O |
|||||||||
| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | ARG | A:502 | A:502 | 42.0 | 0.187 | E | -133.4 | 115.2 | 42.0 | 0.187 | 0.0 |
SO4 HOH |
2.894 3.157 |
NH2 CA |
O3 O |
||
| ARG | B:502 | B:502 | 39.0 | 0.173 | E | -137.1 | 133.5 | NA | NA | NA | |||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | ARG | A:502 | A:502 | 46.0 | 0.204 | E | -128.7 | 105.8 | 46.0 | 0.204 | 0.0 |
HOH |
3.176 |
CA |
O |
||
| ARG | B:502 | B:502 | 37.0 | 0.164 | E | -137.0 | 137.0 | NA | NA | NA | |||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | ARG | A:502 | A:502 | 43.0 | 0.191 | E | -127.6 | 121.5 | 43.0 | 0.191 | 0.0 |
HOH |
3.593 |
CA |
O |
||
| ARG | B:502 | B:502 | 40.0 | 0.178 | E | -138.1 | 132.1 | NA | NA | NA | |||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | ARG | A:502 | A:502 | 45.0 | 0.2 | E | -125.5 | 144.7 | NA | NA | NA | ||||||
| ARG | B:502 | B:502 | 41.0 | 0.182 | E | -132.0 | 137.7 | 41.0 | 0.182 | 0.0 |
HOH |
2.254 |
HH12 |
H2 |
|||||||||
| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ARG | A:524 | A:521 | 27.0 | 0.12 | E | -135.8 | 134.7 | 27.0 | 0.12 | 0.0 |
G1P HOH |
2.878 3.664 |
NH2 CD |
O1P O |
||
| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ARG | A:524 | A:521 | 40.0 | 0.178 | E | -141.0 | 157.6 | 40.0 | 0.178 | 0.0 |
HOH |
3.872 |
NH1 |
O |
||
| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ARG | A:524 | A:521 | 37.0 | 0.164 | E | -144.7 | 161.4 | 37.0 | 0.164 | 0.0 |
G6P HOH |
3.149 3.175 |
NH1 NH1 |
O3P O |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | ARG | A:503 | A:503 | 38.0 | 0.169 | E | -128.5 | 142.6 | |