Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 64125321 . G A CCDS625.1:NM_002633.2:c.1664cGc>cAc_NP_002624.2:p.555R>H Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5epc 1 P36871 100.0 0.0 X-RAY
 2016-04-27 ARG A:578 A:555 71.0 0.316 -86.2 126.9 71.0 0.316 0.0 HOH
 2.817
 O
 O
ARG B:578 B:555 70.0 0.311 -83.1 131.5 NA NA NA
6uiq 1 P36871 100.0 0.0 X-RAY
 2020-08-12 ARG A:578 B:555 67.0 0.298 -83.5 129.3 67.0 0.298 0.0 HOH
 2.836
 NH1
 O
ARG B:578 A:555 70.0 0.311 -80.6 130.1 NA NA NA
5vin 1 P36871 99.82 0.0 X-RAY
 2018-06-27 ARG A:578 A:555 61.0 0.271 -86.1 127.2 61.0 0.271 0.0 SO4
HOH
 3.268
3.688
 NH2
NH1
 O3
O
ARG B:578 B:555 77.0 0.342 -122.5 136.0 NA NA NA
6uo6 1 P36871 99.82 0.0 X-RAY
 2020-03-04 ARG A:578 A:555 70.0 0.311 -90.8 128.7 70.0 0.311 0.0 HOH
 2.724
 NH1
 O
ARG B:578 B:555 72.0 0.32 -119.4 131.3 NA NA NA
5vg7 1 P36871 99.82 0.0 X-RAY
 2018-06-20 ARG A:557 A:555 70.0 0.311 -88.0 129.2 70.0 0.311 0.0 SO4
HOH
 3.078
2.747
 NH2
NH1
 O2
O
5vg7 2 P36871 99.82 0.0 X-RAY
 2018-06-20 ARG B:557 B:555 67.0 0.298 -86.6 129.9 NA NA NA
5f9c 1 P36871 99.82 0.0 X-RAY
 2016-04-27 ARG A:555 A:555 69.0 0.307 -84.2 126.7 69.0 0.307 0.0 HOH
 2.386
 NH1
 O
ARG B:555 B:555 67.0 0.298 -83.8 131.5 NA NA NA
5hsh 1 P36871 99.82 0.0 X-RAY
 2016-04-27 ARG A:555 A:555 72.0 0.32 -120.2 130.9 72.0 0.32 0.0 HOH
 3.007
 O
 O
ARG B:555 B:555 81.0 0.36 -121.0 136.1 NA NA NA
5tr2 1 P36871 99.82 0.0 X-RAY
 2017-02-08 ARG A:578 A:555 80.0 0.356 -95.6 141.7 80.0 0.356 0.0 HOH
 2.756
 NH1
 O
ARG B:578 B:555 86.0 0.382 -123.1 143.8 NA NA NA
5jn5 1 P36871 99.82 0.0 X-RAY
 2017-02-08 ARG A:578 A:555 69.0 0.307 -90.4 130.3 69.0 0.307 0.0 HOH
 2.783
 O
 O
ARG B:578 B:555 72.0 0.32 -74.0 135.3 NA NA NA
5vec 1 P36871 99.82 0.0 X-RAY
 2018-06-27 ARG A:578 A:555 68.0 0.302 -95.2 126.7 68.0 0.302 0.0 GOL
HOH
 3.329
2.778
 NE
NH1
 C3
O
ARG B:578 B:555 68.0 0.302 -59.1 124.6 NA NA NA
5vbi 1 P36871 99.82 0.0 X-RAY
 2018-06-20 ARG A:578 A:555 70.0 0.311 -87.8 130.4 70.0 0.311 0.0 HOH
 2.818
 NH1
 O
ARG B:578 B:555 66.0 0.293 -83.1 130.8 NA NA NA
1c47 1 P00949 96.97 0.0 X-RAY
 1999-08-13 ARG A:554 A:554 66.0 0.293 -80.7 104.6 66.0 0.293 0.0
ARG B:554 B:554 71.0 0.316 -83.3 115.9 71.0 0.316 0.0 HOH
 2.693
 O
 O
1c4g 1 P00949 96.97 0.0 X-RAY
 1999-08-27 ARG A:554 A:554 103.0 0.458 -172.2 109.8 103.0 0.458 0.0
ARG B:554 B:554 63.0 0.28 -101.1 110.2 63.0 0.28 0.0 HOH
 2.376
 O
 O
1jdy 1 P00949 96.97 0.0 X-RAY
 1997-03-12 ARG A:554 A:554 73.0 0.324 -76.7 136.9 73.0 0.324 0.0
ARG B:554 B:554 72.0 0.32 -94.5 120.9 NA NA NA
1lxt 1 P00949 96.97 0.0 X-RAY
 1997-02-12 ARG A:554 A:554 83.0 0.369 -72.0 122.1 83.0 0.369 0.0
ARG B:554 B:554 69.0 0.307 -99.0 118.0 NA NA NA
1vkl 1 P00949 96.97 0.0 X-RAY
 1997-01-11 ARG A:554 A:554 82.0 0.364 -53.8 121.2 82.0 0.364 0.0
ARG B:554 B:554 69.0 0.307 -95.2 122.0 NA NA NA
3pmg 1 P00949 96.97 0.0 X-RAY
 1995-12-07 ARG A:554 A:554 74.0 0.329 -74.1 115.8 NA NA NA
ARG B:554 B:554 68.0 0.302 -88.1 130.2 68.0 0.302 0.0 HOH
 1.689
 HH21
 H1
6sno 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ARG A:576 A:573 79.0 0.351 -82.2 145.0 79.0 0.351 0.0
6snp 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ARG A:576 A:573 83.0 0.369 -47.3 140.2 83.0 0.369 0.0
6snq 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ARG A:576 A:573 73.0 0.324 -88.5 137.8 73.0 0.324 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p36871-f1 1 P36871 100.0 0.0 ARG A:555 A:555 65.0 0.289 -86.1 122.4