Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 64125324 . C A CCDS625.1:NM_002633.2:c.1667aCt>aAt_NP_002624.2:p.556T>N Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5epc 1 P36871 100.0 0.0 X-RAY
 2016-04-27 THR A:579 A:556 117.0 0.836 S -95.3 -5.0 117.0 0.836 0.0 GOL
HOH
 6.597
2.655
 O
O
 O3
O
THR B:579 B:556 119.0 0.85 S -101.4 -5.9 NA NA NA
6uiq 1 P36871 100.0 0.0 X-RAY
 2020-08-12 THR A:579 B:556 123.0 0.879 S -95.8 -2.1 123.0 0.879 0.0 HOH
 3.056
 O
 O
THR B:579 A:556 120.0 0.857 S -98.5 -4.4 NA NA NA
5vin 1 P36871 99.82 0.0 X-RAY
 2018-06-27 THR A:579 A:556 123.0 0.879 S -96.9 -4.7 123.0 0.879 0.0 SO4
HOH
 8.115
5.963
 N
O
 O2
O
THR B:579 B:556 135.0 0.964 S -99.2 -6.8 NA NA NA
6uo6 1 P36871 99.82 0.0 X-RAY
 2020-03-04 THR A:579 A:556 116.0 0.829 S -95.4 -5.9 116.0 0.829 0.0 HOH
 2.661
 O
 O
THR B:579 B:556 120.0 0.857 S -99.3 -2.8 NA NA NA
5vg7 1 P36871 99.82 0.0 X-RAY
 2018-06-20 THR A:558 A:556 113.0 0.807 S -97.4 -4.7 113.0 0.807 0.0 SO4
HOH
 9.264
2.681
 N
O
 O1
O
5vg7 2 P36871 99.82 0.0 X-RAY
 2018-06-20 THR B:558 B:556 112.0 0.8 S -99.8 -13.0 NA NA NA
5f9c 1 P36871 99.82 0.0 X-RAY
 2016-04-27 THR A:556 A:556 117.0 0.836 S -93.2 -3.7 117.0 0.836 0.0 GOL
HOH
 7.233
3.883
 O
C
 O3
O
THR B:556 B:556 126.0 0.9 S -92.6 -3.7 NA NA NA
5hsh 1 P36871 99.82 0.0 X-RAY
 2016-04-27 THR A:556 A:556 123.0 0.879 S -83.0 -32.5 123.0 0.879 0.0 HOH
 3.535
 O
 O
THR B:556 B:556 155.0 1.0 S -71.6 -45.7 NA NA NA
5tr2 1 P36871 99.82 0.0 X-RAY
 2017-02-08 THR A:579 A:556 120.0 0.857 S -101.8 -16.2 120.0 0.857 0.0 HOH
 2.532
 N
 O
THR B:579 B:556 91.0 NA S -101.9 -16.7 NA NA NA
5jn5 1 P36871 99.82 0.0 X-RAY
 2017-02-08 THR A:579 A:556 116.0 0.829 S -100.5 -6.0 116.0 0.829 0.0 HOH
 2.677
 O
 O
THR B:579 B:556 115.0 0.821 S -110.9 -0.8 NA NA NA
5vec 1 P36871 99.82 0.0 X-RAY
 2018-06-27 THR A:579 A:556 123.0 0.879 S -95.7 -3.0 123.0 0.879 0.0 GOL
HOH
 8.009
2.537
 N
O
 C1
O
THR B:579 B:556 114.0 0.814 -91.6 -20.1 NA NA NA
5vbi 1 P36871 99.82 0.0 X-RAY
 2018-06-20 THR A:579 A:556 115.0 0.821 S -98.3 -5.8 115.0 0.821 0.0 HOH
 2.735
 O
 O
THR B:579 B:556 116.0 0.829 S -103.5 -9.0 NA NA NA
1c47 1 P00949 96.97 0.0 X-RAY
 1999-08-13 THR A:555 A:555 126.0 0.9 S -83.9 -20.9 126.0 0.9 0.0
THR B:555 B:555 119.0 0.85 S -87.7 -6.7 119.0 0.85 0.0 HOH
 2.987
 O
 O
1c4g 1 P00949 96.97 0.0 X-RAY
 1999-08-27 THR A:555 A:555 99.0 0.707 -133.9 12.3 99.0 0.707 0.0
THR B:555 B:555 118.0 0.843 S -84.3 -16.7 118.0 0.843 0.0 HOH
 2.824
 O
 O
1jdy 1 P00949 96.97 0.0 X-RAY
 1997-03-12 THR A:555 A:555 111.0 0.793 -96.9 -61.5 111.0 0.793 0.0
THR B:555 B:555 126.0 0.9 S -87.4 -21.8 NA NA NA
1lxt 1 P00949 96.97 0.0 X-RAY
 1997-02-12 THR A:555 A:555 117.0 0.836 -87.9 -53.9 117.0 0.836 0.0
THR B:555 B:555 124.0 0.886 S -80.2 -32.5 NA NA NA
1vkl 1 P00949 96.97 0.0 X-RAY
 1997-01-11 THR A:555 A:555 99.0 0.707 -82.0 -58.4 99.0 0.707 0.0
THR B:555 B:555 122.0 0.871 S -94.4 -11.9 NA NA NA
3pmg 1 P00949 96.97 0.0 X-RAY
 1995-12-07 THR A:555 A:555 123.0 0.879 S -89.1 -9.4 NA NA NA
THR B:555 B:555 119.0 0.85 S -98.4 -11.3 119.0 0.85 0.0 HOH
 2.155
 O
 H1
6sno 1 P36871 93.05 0.0 X-RAY
 2020-04-08 THR A:577 A:574 114.0 0.814 S -106.7 -23.0 114.0 0.814 0.0
6snp 1 P36871 93.05 0.0 X-RAY
 2020-04-08 THR A:577 A:574 124.0 0.886 S -97.6 -48.9 124.0 0.886 0.0
6snq 1 P36871 93.05 0.0 X-RAY
 2020-04-08 THR A:577 A:574 117.0 0.836 S -111.5 -5.0 117.0 0.836 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p36871-f1 1 P36871 100.0 0.0 THR A:556 A:556 115.0 0.821 S -94.8 -8.9