Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 949377 . C A CCDS6.1:NM_005101.3:c.17aCg>aAg_NP_005092.1:p.6T>K Homo sapiens ISG15 ubiquitin-like modifier (ISG15), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3r66 2 P05161 100.0 6e-113 X-RAY
2011-06-08 THR C:13 C:6 21.0 0.15 E -93.5 123.5 21.0 0.15 0.0 HOH
8.140
N
O
THR D:13 D:6 19.0 0.136 E -93.3 122.7 19.0 0.136 0.0 HOH
7.478
O
O
3sdl 2 P05161 100.0 6e-113 X-RAY
2011-07-20 THR C:13 C:6 18.0 0.129 E -100.2 124.0 18.0 0.129 0.0 HOH
7.694
N
O
THR D:13 D:6 18.0 0.129 E -104.5 121.4 18.0 0.129 0.0 HOH
2.777
OG1
O
7rbs 2 P05161 100.0 3e-112 X-RAY
2021-09-29 THR B:8 B:6 19.0 0.136 E -99.8 125.7 19.0 0.136 0.0
THR D:8 D:6 21.0 0.15 E -93.9 128.9 NA NA NA
THR F:8 F:6 21.0 0.15 E -83.6 135.9 NA NA NA
THR H:8 H:6 28.0 0.2 E -88.6 116.8 NA NA NA
THR J:8 J:6 24.0 0.171 E -86.1 133.6 NA NA NA
7s6p 1 P05161 100.0 3e-112 X-RAY
2021-09-22 THR A:8 A:6 22.0 0.157 E -89.5 129.0 22.0 0.157 0.0 HOH
2.625
OG1
O
THR B:8 B:6 25.0 0.179 E -90.6 129.0 NA NA NA
THR C:8 C:6 21.0 0.15 E -90.3 128.0 NA NA NA
THR D:8 D:6 26.0 0.186 E -90.3 128.3 NA NA NA
THR E:8 E:6 21.0 0.15 E -91.1 129.3 NA NA NA
THR F:8 F:6 27.0 0.193 E -91.4 128.8 NA NA NA
3rt3 1 P05161 99.37 4e-112 X-RAY
2011-07-13 THR A:6 B:6 21.0 0.15 E -93.5 127.5 21.0 0.15 0.0 HOH
7.572
CA
O
6bi8 2 P05161 99.36 9e-111 X-RAY
2018-11-07 THR C:6 C:6 39.0 0.279 -178.6 144.0 39.0 0.279 0.0
THR D:6 D:6 29.0 0.207 E -78.2 146.4 NA NA NA
3pse 2 P05161 98.72 3e-110 X-RAY
2011-01-19 THR B:6 B:6 39.0 0.279 E -92.7 135.5 39.0 0.279 0.0
1z2m 1 P05161 99.35 4e-110 X-RAY
2005-05-24 THR A:6 A:6 25.0 0.179 E -94.0 129.2 25.0 0.179 0.0 OS4
HOH
9.331
7.913
CG2
N
OS
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05161-f1 1 P05161 100.0 2e-119 THR A:6 A:6 12.0 0.086 E -88.3 115.9