Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 949422 . G A CCDS6.1:NM_005101.3:c.62aGc>aAc_NP_005092.1:p.21S>N Homo sapiens ISG15 ubiquitin-like modifier (ISG15), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3r66 2 P05161 100.0 6e-113 X-RAY
2011-06-08 SER C:28 C:21 127.0 1.0 S -114.3 87.7 127.0 1.0 0.0 HOH
5.267
N
O
SER D:28 D:21 104.0 0.904 S -78.8 -12.5 104.0 0.904 0.0 HOH
6.019
O
O
3sdl 2 P05161 100.0 6e-113 X-RAY
2011-07-20 SER C:28 C:21 129.0 1.0 S -81.0 -39.8 129.0 1.0 0.0 HOH
4.532
N
O
SER D:28 D:21 84.0 0.73 S -139.1 -86.2 84.0 0.73 0.0 HOH
5.969
O
O
7rbs 2 P05161 100.0 3e-112 X-RAY
2021-09-29 SER B:23 B:21 66.0 0.574 T -56.5 -40.0 55.0 0.478 0.096 A:P0DTC1:0.096
HOH
6.732
OG
O
SER D:23 D:21 67.0 0.583 T -44.2 -48.3 NA NA NA
SER F:23 F:21 57.0 0.496 T -55.8 -49.2 NA NA NA
SER H:23 H:21 71.0 0.617 T -53.2 -39.6 NA NA NA
SER J:23 J:21 65.0 0.565 T -47.1 -51.3 NA NA NA
7s6p 1 P05161 100.0 3e-112 X-RAY
2021-09-22 SER A:23 A:21 88.0 0.765 S -103.6 -106.4 88.0 0.765 0.0
SER B:23 B:21 78.0 0.678 S -105.4 -107.4 NA NA NA
SER C:23 C:21 88.0 0.765 S -105.5 -107.3 NA NA NA
SER D:23 D:21 88.0 0.765 S -105.3 -104.1 NA NA NA
SER E:23 E:21 71.0 0.617 S -103.4 -105.8 NA NA NA
SER F:23 NA:NA DO NA DO DO DO NA NA NA
3rt3 1 P05161 99.37 4e-112 X-RAY
2011-07-13 SER A:21 B:21 85.0 0.739 T -60.4 -27.7 85.0 0.739 0.0 HOH
2.505
O
O
6bi8 2 P05161 99.36 9e-111 X-RAY
2018-11-07 SER C:21 C:21 53.0 0.461 S 179.7 163.7 53.0 0.461 0.0
SER D:21 D:21 64.0 NA S -74.4 -121.1 NA NA NA
3pse 2 P05161 98.72 3e-110 X-RAY
2011-01-19 SER B:21 NA:NA DO NA DO DO DO NA NA NA
1z2m 1 P05161 99.35 4e-110 X-RAY
2005-05-24 SER A:21 A:21 92.0 0.8 S -125.5 -93.8 92.0 0.8 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05161-f1 1 P05161 100.0 2e-119 SER A:21 A:21 60.0 0.522 T -56.2 -24.4