Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 949608 . G A CCDS6.1:NM_005101.3:c.248aGc>aAc_NP_005092.1:p.83S>N Homo sapiens ISG15 ubiquitin-like modifier (ISG15), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3r66 2 P05161 100.0 6e-113 X-RAY
 2011-06-08 SER C:90 C:83 45.0 0.391 E -114.1 137.9 45.0 0.391 0.0 HOH
 2.867
 N
 O
SER D:90 D:83 46.0 0.4 E -112.7 137.3 46.0 0.4 0.0 HOH
 3.158
 OG
 O
3sdl 2 P05161 100.0 6e-113 X-RAY
 2011-07-20 SER C:90 C:83 45.0 0.391 E -114.9 142.0 45.0 0.391 0.0 HOH
 2.945
 N
 O
SER D:90 D:83 48.0 0.417 E -114.2 139.2 48.0 0.417 0.0 HOH
 4.228
 OG
 O
7rbs 2 P05161 100.0 3e-112 X-RAY
 2021-09-29 SER B:85 B:83 50.0 0.435 E -89.6 127.2 50.0 0.435 0.0
SER D:85 D:83 48.0 0.417 E -91.2 126.3 NA NA NA
SER F:85 F:83 52.0 0.452 E -95.4 115.7 NA NA NA
SER H:85 H:83 52.0 0.452 E -87.8 132.9 NA NA NA
SER J:85 J:83 47.0 0.409 E -91.7 131.3 NA NA NA
7s6p 1 P05161 100.0 3e-112 X-RAY
 2021-09-22 SER A:85 A:83 62.0 0.539 E -91.3 119.9 62.0 0.539 0.0 HOH
 2.993
 N
 O
SER B:85 B:83 59.0 0.513 E -90.0 119.4 NA NA NA
SER C:85 C:83 63.0 0.548 E -91.2 119.1 NA NA NA
SER D:85 D:83 63.0 0.548 E -91.9 120.3 NA NA NA
SER E:85 E:83 60.0 0.522 E -90.1 120.5 NA NA NA
SER F:85 F:83 63.0 0.548 E -91.6 119.7 NA NA NA
3rt3 1 P05161 99.37 4e-112 X-RAY
 2011-07-13 SER A:83 B:83 48.0 0.417 E -99.5 136.1 48.0 0.417 0.0 HOH
 8.331
 N
 O
6bi8 2 P05161 99.36 9e-111 X-RAY
 2018-11-07 SER C:83 C:83 56.0 0.487 E -101.5 130.5 56.0 0.487 0.0 HOH
 7.480
 O
 O
SER D:83 D:83 55.0 0.478 E -101.6 137.8 NA NA NA
3pse 2 P05161 98.72 3e-110 X-RAY
 2011-01-19 ASN B:83 B:83 79.0 0.494 E -103.0 133.6 79.0 0.494 0.0 HOH
 4.456
 OD1
 O
1z2m 1 P05161 99.35 4e-110 X-RAY
 2005-05-24 SER A:83 A:83 55.0 0.478 E -106.0 128.3 55.0 0.478 0.0 HOH
 2.771
 OG
 O
3phx 2 P05161 100.0 5e-52 X-RAY
 2011-02-02 SER B:6 B:83 45.0 0.391 E -99.5 131.2 45.0 0.391 0.0 HOH
 3.009
 N
 O
6xa9 2 P05161 100.0 5e-52 X-RAY
 2020-06-17 SER B:6 B:83 50.0 0.435 E -110.9 130.5 50.0 0.435 0.0
SER D:6 D:83 75.0 0.652 E -116.2 129.3 NA NA NA
SER F:6 F:83 80.0 0.696 E -115.8 129.6 NA NA NA
5tl6 2 P05161 100.0 5e-51 X-RAY
 2017-05-03 SER C:5 C:83 39.0 0.339 E -96.2 126.7 NA NA NA
SER D:5 A:83 45.0 0.391 E -124.0 133.7 45.0 0.391 0.0 HOH
 4.913
 OG
 O
5w8t 1 P05161 100.0 5e-51 X-RAY
 2017-09-27 SER A:5 B:83 34.0 0.296 E -111.1 120.6 34.0 0.296 0.0 HOH
 7.757
 N
 O
SER C:5 D:83 32.0 0.278 E -115.5 118.4 NA NA NA
5w8u 2 P05161 100.0 5e-51 X-RAY
 2017-09-27 SER B:5 B:83 32.0 0.278 E -110.0 117.0 32.0 0.278 0.0 HOH
 6.794
 O
 O
SER D:5 D:83 32.0 0.278 E -108.5 120.8 NA NA NA
6ffa 2 P05161 100.0 2e-50 X-RAY
 2018-02-21 SER B:6 B:83 58.0 0.504 E -95.6 140.0 58.0 0.504 0.0 HOH
 2.728
 OG
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05161-f1 1 P05161 100.0 2e-119 SER A:83 A:83 46.0 0.4 E -84.2 119.8