Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 95353589 . C A CCDS31249.1:NM_006744.3:c.559Gtc>Ttc_NP_006735.2:p.187V>F Homo sapiens retinol binding protein 4 (RBP4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4o9s 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 VAL A:201 A:169 81.0 0.523 -89.1 150.0 81.0 0.523 0.0 EDO
EDO
HOH
 5.761
6.284
3.072
 O
C
O
 O2
O1
O
VAL B:201 B:169 72.0 0.465 -89.4 153.4 NA NA NA
3fmz 1 P02753 98.92 2e-139 X-RAY
 2009-01-27 VAL A:198 A:169 78.0 0.503 -74.8 134.5 78.0 0.503 0.0
VAL B:198 B:169 78.0 0.503 -67.2 138.6 NA NA NA
4psq 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 VAL A:198 B:169 65.0 0.419 -91.4 150.5 65.0 0.419 0.0 EDO
HOH
 7.964
4.157
 N
CG1
 O2
O
VAL B:198 A:169 65.0 0.419 -89.7 148.3 NA NA NA
6qba 1 P02753 100.0 2e-138 X-RAY
 2020-06-03 VAL A:171 A:169 75.0 0.484 -87.4 166.7 75.0 0.484 0.0 IMD
IMD
ZN
HOH
 8.903
7.219
8.626
2.358
 C
C
O
H
 H4
H2
ZN
O
1jyd 1 P02753 100.0 8e-138 X-RAY
 2003-07-01 VAL A:170 A:169 71.0 0.458 -96.1 153.8 71.0 0.458 0.0 HOH
 3.248
 CG1
 O
1brp 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 VAL A:169 A:169 70.0 0.452 -93.9 166.1 70.0 0.452 0.0 HOH
 4.265
 CG1
 O
1brq 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 VAL A:169 A:169 73.0 0.471 -89.6 158.1 73.0 0.471 0.0 HOH
 4.812
 CG1
 O
1rbp 1 P02753 100.0 8e-138 X-RAY
 1991-07-15 VAL A:169 A:169 74.0 0.477 -83.2 138.3 74.0 0.477 0.0 HOH
 2.851
 N
 O
5nty 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:169 A:169 70.0 0.452 -83.7 149.4 70.0 0.452 0.0 HOH
 5.266
 N
 O
5nu2 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:169 A:169 71.0 0.458 -81.9 148.6 71.0 0.458 0.0 HOH
 3.053
 N
 O
5nu6 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:169 A:169 70.0 0.452 -83.8 149.1 70.0 0.452 0.0 HOH
 3.096
 N
 O
5nu7 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:169 A:169 71.0 0.458 -83.9 148.1 71.0 0.458 0.0 HOH
 5.195
 N
 O
5nu8 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:169 A:169 71.0 0.458 -82.9 148.0 71.0 0.458 0.0 HOH
 2.983
 N
 O
5nu9 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:169 A:169 70.0 0.452 -85.5 148.2 70.0 0.452 0.0 HOH
 3.151
 N
 O
5nua 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:169 A:169 71.0 0.458 -84.5 148.8 71.0 0.458 0.0 HOH
 3.061
 N
 O
5nub 1 P02753 100.0 8e-138 X-RAY
 2018-03-14 VAL A:169 A:169 73.0 0.471 -84.4 147.3 73.0 0.471 0.0 HOH
 3.034
 N
 O
1jyj 1 P02753 98.9 8e-136 X-RAY
 2003-07-01 VAL A:170 A:169 77.0 0.497 -94.0 152.0 77.0 0.497 0.0 HOH
 3.731
 N
 O
1qab 2 P02753 98.33 2e-133 X-RAY
 1999-02-16 VAL E:166 E:169 47.0 0.303 -99.0 117.2 47.0 0.303 0.0
VAL F:166 F:169 72.0 0.465 -75.1 -153.6 72.0 0.465 0.0
3bsz 2 P02753 100.0 3e-133 X-RAY
 2008-11-11 VAL E:169 E:169 79.0 0.51 -110.7 145.2 79.0 0.51 0.0 HOH
 7.018
 CG2
 O
VAL F:169 F:169 82.0 0.529 -114.3 147.2 80.0 0.516 0.013 H:None:0.013
 HOH
 4.826
 CG1
 O
2wqa 2 P02753 99.44 3e-133 X-RAY
 2010-09-01 VAL E:170 E:169 68.0 0.439 -85.1 135.7 68.0 0.439 0.0 HOH
 3.466
 CA
 O
VAL F:170 F:169 63.0 0.406 -85.0 145.2 63.0 0.406 0.0 HOH
 3.518
 CA
 O
2wq9 1 P02753 100.0 1e-131 X-RAY
 2010-09-01 VAL A:169 A:169 72.0 0.465 -89.6 151.9 72.0 0.465 0.0 HOH
 3.337
 N
 O
2wr6 1 P02753 99.43 1e-131 X-RAY
 2010-09-15 VAL A:170 A:169 65.0 0.419 -79.9 142.8 65.0 0.419 0.0 HOH
 3.327
 N
 O
1aqb 1 P27485 92.9 7e-131 X-RAY
 1998-01-28 THR A:169 A:169 68.0 0.486 -99.7 161.4 68.0 0.486 0.0 HOH
 3.232
 N
 O
1hbq 1 P18902 92.35 4e-130 X-RAY
 1994-01-31 PRO A:169 A:169 64.0 0.441 -78.6 153.2 64.0 0.441 0.0 HOH
 3.511
 CG
 O
1erb 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 PRO A:169 A:169 65.0 0.448 -77.4 146.4 65.0 0.448 0.0 HOH
 3.955
 CD
 O
1fel 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 PRO A:169 A:169 64.0 0.441 -91.6 152.7 64.0 0.441 0.0 HOH
 4.560
 N
 O
1fem 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 PRO A:169 A:169 58.0 0.4 -77.7 159.4 58.0 0.4 0.0 HOH
 4.734
 N
 O
1fen 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 PRO A:169 A:169 58.0 0.4 -77.8 151.3 58.0 0.4 0.0 HOH
 4.913
 CA
 O
1hbp 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 PRO A:169 A:169 70.0 0.483 -76.2 157.3 70.0 0.483 0.0 HOH
 4.051
 CD
 O
1kt3 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 PRO A:169 A:169 63.0 0.434 -75.0 160.0 63.0 0.434 0.0 HOH
 3.985
 CD
 O
1kt4 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 PRO A:169 A:169 55.0 0.379 -62.5 148.0 55.0 0.379 0.0 HOH
 3.462
 CB
 O
1kt6 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 PRO A:169 A:169 66.0 0.455 -79.5 157.5 66.0 0.455 0.0 HOH
 3.521
 CD
 O
1kt7 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 PRO A:169 A:169 53.0 0.366 -80.0 160.8 53.0 0.366 0.0 HOH
 3.293
 O
 O
1kt5 1 P18902 93.14 1e-124 X-RAY
 2003-06-03 PRO A:169 A:169 66.0 0.455 -67.4 151.5 66.0 0.455 0.0 HOH
 3.645
 CA
 O
1rlb 2 P02753 92.53 2e-123 X-RAY
 1996-04-11 PRO E:169 E:169 67.0 0.462 -72.9 146.4 67.0 0.462 0.0
PRO F:169 F:169 59.0 0.407 -54.3 111.7 59.0 0.407 0.0
1iiu 1 P41263 87.21 3e-116 X-RAY
 2002-01-16 VAL A:168 A:169 72.0 0.465 -116.6 158.2 72.0 0.465 0.0 HOH
 3.468
 CA
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02753-f1 1 P02753 100.0 2e-152 VAL A:187 A:187 81.0 0.523 -83.7 135.4