Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 95353606 . C A CCDS31249.1:NM_006744.3:c.542aGg>aTg_NP_006735.2:p.181R>M Homo sapiens retinol binding protein 4 (RBP4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4o9s 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 ARG A:195 A:163 214.0 0.951 T 63.4 19.0 214.0 0.951 0.0 EDO
EDO
HOH
 3.056
7.275
5.037
 N
O
NH1
 O1
O2
O
ARG B:195 B:163 213.0 0.947 T 58.8 27.3 NA NA NA
3fmz 1 P02753 98.92 2e-139 X-RAY
 2009-01-27 ARG A:192 A:163 209.0 0.929 T 76.5 5.6 209.0 0.929 0.0 HOH
 3.077
 N
 O
ARG B:192 B:163 232.0 1.0 T 84.5 -17.1 NA NA NA
4psq 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 ARG A:192 B:163 237.0 1.0 T 61.1 20.4 237.0 1.0 0.0 EDO
EDO
HOH
 2.792
6.971
5.325
 N
O
N
 O2
O1
O
ARG B:192 A:163 244.0 1.0 T 62.0 14.9 NA NA NA
6qba 1 P02753 100.0 2e-138 X-RAY
 2020-06-03 ARG A:165 A:163 228.0 1.0 T 71.5 12.5 228.0 1.0 0.0 PEG
HOH
 4.690
2.114
 H
H
 HO1
O
1jyd 1 P02753 100.0 8e-138 X-RAY
 2003-07-01 ARG A:164 A:163 242.0 1.0 T -92.1 -2.9 242.0 1.0 0.0 HOH
 2.714
 O
 O
1brp 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 ARG A:163 A:163 175.0 0.778 T 74.3 12.4 175.0 0.778 0.0 HOH
 2.302
 NH2
 O
1brq 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 ARG A:163 A:163 190.0 0.844 T 45.6 48.3 190.0 0.844 0.0 HOH
 2.870
 NH2
 O
1rbp 1 P02753 100.0 8e-138 X-RAY
 1991-07-15 ARG A:163 A:163 174.0 0.773 T 74.9 17.8 174.0 0.773 0.0 HOH
 2.932
 O
 O
5nty 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ARG A:163 A:163 227.0 1.0 T -92.2 0.6 227.0 1.0 0.0 CL
HOH
 3.825
2.551
 CA
NH1
 CL
O
5nu2 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ARG A:163 A:163 226.0 1.0 T -86.9 -4.1 226.0 1.0 0.0 CL
HOH
 3.753
2.711
 CA
O
 CL
O
5nu6 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ARG A:163 A:163 232.0 1.0 T -87.3 -4.5 232.0 1.0 0.0 CL
HOH
 3.740
2.740
 CA
O
 CL
O
5nu7 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ARG A:163 A:163 228.0 1.0 T -90.2 -1.2 228.0 1.0 0.0 CL
HOH
 3.799
2.713
 CG
O
 CL
O
5nu8 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ARG A:163 A:163 226.0 1.0 T -86.9 -4.3 226.0 1.0 0.0 CL
HOH
 3.797
2.734
 CA
NH1
 CL
O
5nu9 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ARG A:163 A:163 229.0 1.0 T -86.6 -3.7 229.0 1.0 0.0 CL
HOH
 3.727
2.804
 CA
O
 CL
O
5nua 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ARG A:163 A:163 227.0 1.0 T -85.9 -4.0 227.0 1.0 0.0 CL
HOH
 3.751
2.771
 CA
O
 CL
O
5nub 1 P02753 100.0 8e-138 X-RAY
 2018-03-14 ARG A:163 A:163 230.0 1.0 T -85.9 -4.4 230.0 1.0 0.0 CL
HOH
 3.707
2.727
 CA
O
 CL
O
1jyj 1 P02753 98.9 8e-136 X-RAY
 2003-07-01 ARG A:164 A:163 236.0 1.0 T -91.1 -3.9 236.0 1.0 0.0 GOL
HOH
 8.606
2.654
 C
O
 O2
O
1qab 2 P02753 98.33 2e-133 X-RAY
 1999-02-16 ALA E:160 E:163 17.0 0.148 -107.4 115.1 17.0 0.148 0.0
ALA F:160 F:163 100.0 0.87 T 72.4 -17.5 100.0 0.87 0.0
3bsz 2 P02753 100.0 3e-133 X-RAY
 2008-11-11 ARG E:163 E:163 241.0 1.0 T 70.9 -44.1 43.0 0.191 0.809 J:None:0.382
I:None:0.596
 HOH
 4.214
 NH2
 O
ARG F:163 F:163 243.0 1.0 T 73.5 -46.2 53.0 0.236 0.764 G:None:0.587
H:None:0.329
 HOH
 2.756
 CD
 O
2wqa 2 P02753 99.44 3e-133 X-RAY
 2010-09-01 ARG E:164 E:163 235.0 1.0 T 63.8 14.1 235.0 1.0 0.0 HOH
 6.347
 N
 O
ARG F:164 F:163 244.0 1.0 T 68.3 8.3 244.0 1.0 0.0 HOH
 3.275
 C
 O
2wq9 1 P02753 100.0 1e-131 X-RAY
 2010-09-01 ARG A:163 A:163 234.0 1.0 T -86.7 -3.1 234.0 1.0 0.0 GOL
HOH
 5.522
2.723
 O
O
 O2
O
2wr6 1 P02753 99.43 1e-131 X-RAY
 2010-09-15 ARG A:164 A:163 235.0 1.0 T -84.7 -7.3 235.0 1.0 0.0 HOH
 2.744
 NE
 O
1aqb 1 P27485 92.9 7e-131 X-RAY
 1998-01-28 ARG A:163 A:163 209.0 0.929 T 71.7 7.7 209.0 0.929 0.0 HOH
 2.680
 N
 O
1hbq 1 P18902 92.35 4e-130 X-RAY
 1994-01-31 ARG A:163 A:163 210.0 0.933 T 69.2 10.1 210.0 0.933 0.0 HOH
 3.269
 O
 O
1erb 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 ARG A:163 A:163 216.0 0.96 T 71.9 10.6 216.0 0.96 0.0 HOH
 3.223
 CA
 O
1fel 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ARG A:163 A:163 212.0 0.942 T 74.3 1.1 212.0 0.942 0.0 HOH
 3.186
 O
 O
1fem 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ARG A:163 A:163 208.0 0.924 T 64.6 21.4 208.0 0.924 0.0 HOH
 2.587
 O
 O
1fen 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ARG A:163 A:163 215.0 0.956 T 64.8 14.0 215.0 0.956 0.0 HOH
 3.249
 O
 O
1hbp 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 ARG A:163 A:163 209.0 0.929 T 65.9 7.4 209.0 0.929 0.0 HOH
 2.988
 O
 O
1kt3 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ARG A:163 A:163 217.0 0.964 T 67.8 14.2 217.0 0.964 0.0 HOH
 2.492
 NH1
 O
1kt4 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ARG A:163 A:163 211.0 0.938 T 67.0 13.4 211.0 0.938 0.0 HOH
 2.754
 O
 O
1kt6 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ARG A:163 A:163 200.0 0.889 T 71.5 12.1 200.0 0.889 0.0 HOH
 2.813
 O
 O
1kt7 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ARG A:163 A:163 201.0 0.893 T 73.3 10.3 201.0 0.893 0.0 HOH
 2.795
 O
 O
1kt5 1 P18902 93.14 1e-124 X-RAY
 2003-06-03 ARG A:163 A:163 207.0 0.92 T 69.7 14.4 207.0 0.92 0.0 HOH
 2.661
 NH1
 O
1rlb 2 P02753 92.53 2e-123 X-RAY
 1996-04-11 ARG E:163 E:163 215.0 0.956 T 88.8 8.5 215.0 0.956 0.0
ARG F:163 F:163 231.0 1.0 S -143.1 6.2 231.0 1.0 0.0
1iiu 1 P41263 87.21 3e-116 X-RAY
 2002-01-16 ARG A:162 A:163 218.0 0.969 T 67.0 14.9 218.0 0.969 0.0 HOH
 3.199
 CA
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02753-f1 1 P02753 100.0 2e-152 ARG A:181 A:181 245.0 1.0 T 64.4 9.9