Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 95353676 . C A CCDS31249.1:NM_006744.3:c.472Gac>Tac_NP_006735.2:p.158D>Y Homo sapiens retinol binding protein 4 (RBP4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4o9s 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 ASP A:172 A:140 78.0 0.52 -100.2 119.3 78.0 0.52 0.0 EDO
EDO
EDO
HOH
 4.307
9.912
6.057
3.479
 OD2
C
OD1
N
 O2
O1
C2
O
ASP B:172 B:140 81.0 0.54 S -107.6 122.1 NA NA NA
3fmz 1 P02753 98.92 2e-139 X-RAY
 2009-01-27 ASP A:169 A:140 77.0 0.513 S -121.2 114.6 77.0 0.513 0.0 HOH
 3.576
 N
 O
ASP B:169 B:140 82.0 0.547 S -118.8 111.5 NA NA NA
4psq 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 ASP A:169 B:140 82.0 0.547 S -115.7 117.8 82.0 0.547 0.0 EDO
HOH
 6.916
2.750
 N
OD2
 O2
O
ASP B:169 A:140 81.0 0.54 S -111.1 122.2 NA NA NA
6qba 1 P02753 100.0 2e-138 X-RAY
 2020-06-03 ASP A:142 A:140 87.0 0.58 S -99.3 124.3 87.0 0.58 0.0 IMD
IMD
IMD
PEG
ZN
ZN
HOH
 1.967
6.669
9.564
9.444
2.028
9.621
2.673
 OD1
HA
C
HB3
OD1
C
H
 HN3
H5
H2
HO4
ZN
ZN
O
1jyd 1 P02753 100.0 8e-138 X-RAY
 2003-07-01 ASP A:141 A:140 68.0 0.453 S -105.5 120.8 68.0 0.453 0.0 GOL
HOH
 9.984
2.882
 N
N
 O1
O
1brp 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 ASP A:140 A:140 80.0 0.533 S -113.1 125.3 80.0 0.533 0.0 HOH
 4.189
 OD2
 O
1brq 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 ASP A:140 A:140 79.0 0.527 S -127.0 125.6 79.0 0.527 0.0 HOH
 6.853
 N
 O
1rbp 1 P02753 100.0 8e-138 X-RAY
 1991-07-15 ASP A:140 A:140 85.0 0.567 S -95.2 132.0 85.0 0.567 0.0 HOH
 3.109
 CB
 O
5nty 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:140 A:140 78.0 0.52 S -93.9 121.4 78.0 0.52 0.0 HOH
 4.654
 N
 O
5nu2 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:140 A:140 79.0 0.527 S -94.2 121.1 79.0 0.527 0.0 HOH
 3.204
 N
 O
5nu6 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:140 A:140 75.0 0.5 S -96.6 123.4 75.0 0.5 0.0 HOH
 4.860
 N
 O
5nu7 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:140 A:140 78.0 0.52 S -95.2 122.5 78.0 0.52 0.0 HOH
 4.815
 N
 O
5nu8 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:140 A:140 80.0 0.533 S -95.6 121.0 80.0 0.533 0.0 HOH
 3.352
 N
 O
5nu9 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:140 A:140 77.0 0.513 S -96.7 122.6 77.0 0.513 0.0 HOH
 4.820
 N
 O
5nua 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:140 A:140 76.0 0.507 S -97.5 122.2 76.0 0.507 0.0 HOH
 3.398
 N
 O
5nub 1 P02753 100.0 8e-138 X-RAY
 2018-03-14 ASP A:140 A:140 77.0 0.513 S -96.0 122.6 77.0 0.513 0.0 HOH
 3.340
 N
 O
1jyj 1 P02753 98.9 8e-136 X-RAY
 2003-07-01 ASP A:141 A:140 75.0 0.5 S -105.0 119.0 75.0 0.5 0.0 GOL
HOH
 6.778
2.558
 N
OD2
 O3
O
1qab 2 P02753 98.33 2e-133 X-RAY
 1999-02-16 ASP E:137 E:140 81.0 0.54 S -114.0 118.8 81.0 0.54 0.0
ASP F:137 F:140 87.0 0.58 S -85.2 127.4 87.0 0.58 0.0
3bsz 2 P02753 100.0 3e-133 X-RAY
 2008-11-11 ASP E:140 E:140 82.0 0.547 -124.4 103.3 82.0 0.547 0.0
ASP F:140 F:140 80.0 0.533 -123.4 102.1 80.0 0.533 0.0
2wqa 2 P02753 99.44 3e-133 X-RAY
 2010-09-01 ASP E:141 E:140 80.0 0.533 S -125.6 119.2 80.0 0.533 0.0 HOH
 4.626
 N
 O
ASP F:141 F:140 79.0 0.527 S -116.3 123.2 79.0 0.527 0.0 HOH
 2.539
 OD1
 O
2wq9 1 P02753 100.0 1e-131 X-RAY
 2010-09-01 ASP A:140 A:140 79.0 0.527 S -110.7 121.9 79.0 0.527 0.0 GOL
HOH
 8.457
2.712
 N
OD2
 C1
O
2wr6 1 P02753 99.43 1e-131 X-RAY
 2010-09-15 ASP A:141 A:140 76.0 0.507 S -111.0 121.8 76.0 0.507 0.0 HOH
 2.886
 OD2
 O
1aqb 1 P27485 92.9 7e-131 X-RAY
 1998-01-28 ASP A:140 A:140 80.0 0.533 S -100.1 119.8 80.0 0.533 0.0 CD
HOH
 2.402
2.710
 OD1
OD2
 CD
O
1hbq 1 P18902 92.35 4e-130 X-RAY
 1994-01-31 ASP A:140 A:140 83.0 0.553 S -109.1 132.7 83.0 0.553 0.0 HOH
 2.993
 N
 O
1erb 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 ASP A:140 A:140 87.0 0.58 S -109.6 130.6 87.0 0.58 0.0 HOH
 3.157
 N
 O
1fel 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ASP A:140 A:140 87.0 0.58 S -113.8 127.0 87.0 0.58 0.0 HOH
 2.773
 CG
 O
1fem 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ASP A:140 A:140 80.0 0.533 S -119.0 122.7 80.0 0.533 0.0 HOH
 2.777
 N
 O
1fen 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ASP A:140 A:140 82.0 0.547 S -106.8 130.6 82.0 0.547 0.0 HOH
 2.810
 N
 O
1hbp 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 ASP A:140 A:140 85.0 0.567 S -109.4 129.6 85.0 0.567 0.0 HOH
 3.118
 N
 O
1kt3 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ASP A:140 A:140 101.0 0.673 S -107.6 113.3 101.0 0.673 0.0 HOH
 2.850
 O
 O
1kt4 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ASP A:140 A:140 98.0 0.653 S -114.1 126.6 98.0 0.653 0.0 HOH
 2.780
 N
 O
1kt6 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ASP A:140 A:140 107.0 0.713 S -115.9 119.3 107.0 0.713 0.0 HOH
 2.719
 OD2
 O
1kt7 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ASP A:140 A:140 88.0 0.587 S -116.9 120.7 88.0 0.587 0.0 HOH
 2.798
 CB
 O
1kt5 1 P18902 93.14 1e-124 X-RAY
 2003-06-03 ASP A:140 A:140 103.0 0.687 S -116.4 123.1 103.0 0.687 0.0 HOH
 2.976
 N
 O
1rlb 2 P02753 92.53 2e-123 X-RAY
 1996-04-11 ASP E:140 E:140 90.0 0.6 B -130.3 130.5 90.0 0.6 0.0
ASP F:140 F:140 89.0 0.593 S -125.3 131.7 89.0 0.593 0.0
1iiu 1 P41263 87.21 3e-116 X-RAY
 2002-01-16 ASP A:139 A:140 75.0 0.5 S -98.3 117.0 75.0 0.5 0.0 HOH
 2.274
 OD1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02753-f1 1 P02753 100.0 2e-152 ASP A:158 A:158 76.0 0.507 S -102.1 122.6