Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 95353748 . C A CCDS31249.1:NM_006744.3:c.400Gtg>Ttg_NP_006735.2:p.134V>L Homo sapiens retinol binding protein 4 (RBP4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4o9s 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 VAL A:148 A:116 1.0 0.006 E -110.8 117.0 1.0 0.006 0.0 2RY
EDO
EDO
EDO
HOH
 9.338
7.213
9.882
8.248
8.586
 C
CG1
CG1
O
CG2
 C2
C1
C1
C1
O
VAL B:148 B:116 1.0 0.006 E -110.0 118.3 NA NA NA
3fmz 1 P02753 98.92 2e-139 X-RAY
 2009-01-27 VAL A:145 A:116 0.0 0.0 E -113.6 116.9 0.0 0.0 0.0 2T1
 9.758
 C
 F3
VAL B:145 B:116 0.0 0.0 E -115.2 125.4 NA NA NA
4psq 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 VAL A:145 B:116 0.0 0.0 E -116.1 122.4 0.0 0.0 0.0 2WL
EDO
EDO
HOH
 9.945
7.189
8.952
8.052
 C
CG1
CG2
CG2
 CL1
O1
C2
O
VAL B:145 A:116 0.0 0.0 E -116.9 120.6 NA NA NA
6qba 1 P02753 100.0 2e-138 X-RAY
 2020-06-03 VAL A:118 A:116 0.0 0.0 E -120.0 122.8 0.0 0.0 0.0 2T1
IMD
IMD
PEG
ZN
HOH
 9.694
6.596
8.447
6.798
9.985
7.160
 C
HB
HG23
HG22
HB
HG11
 F3
H5
HN1
H22
ZN
O
1jyd 1 P02753 100.0 8e-138 X-RAY
 2003-07-01 VAL A:117 A:116 0.0 0.0 E -121.8 118.6 0.0 0.0 0.0 GOL
HOH
 8.788
5.979
 C
C
 O1
O
1brp 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 VAL A:116 A:116 0.0 0.0 E -128.0 119.1 0.0 0.0 0.0 RTL
 9.797
 C
 C16
1brq 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 VAL A:116 A:116 0.0 0.0 E -142.5 116.2 0.0 0.0 0.0
1rbp 1 P02753 100.0 8e-138 X-RAY
 1991-07-15 VAL A:116 A:116 1.0 0.006 E -126.5 119.0 1.0 0.006 0.0 RTL
HOH
 9.461
7.837
 C
CB
 C16
O
5nty 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:116 A:116 1.0 0.006 E -117.2 122.3 1.0 0.006 0.0 PLM
HOH
 8.804
5.895
 C
C
 CG
O
5nu2 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:116 A:116 0.0 0.0 E -117.3 122.1 0.0 0.0 0.0 PLM
HOH
 9.237
5.715
 C
C
 CG
O
5nu6 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:116 A:116 0.0 0.0 E -118.5 120.7 0.0 0.0 0.0 PLM
HOH
 9.452
5.779
 C
C
 CG
O
5nu7 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:116 A:116 0.0 0.0 E -118.1 122.0 0.0 0.0 0.0 RTL
HOH
 9.542
5.629
 C
C
 C16
O
5nu8 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:116 A:116 1.0 0.006 E -117.7 120.6 1.0 0.006 0.0 PLM
HOH
 9.215
5.712
 C
C
 CG
O
5nu9 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:116 A:116 0.0 0.0 E -118.1 120.6 0.0 0.0 0.0 PLM
HOH
 9.444
5.682
 C
C
 CG
O
5nua 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 VAL A:116 A:116 0.0 0.0 E -117.9 120.8 0.0 0.0 0.0 HOH
 5.701
 C
 O
5nub 1 P02753 100.0 8e-138 X-RAY
 2018-03-14 VAL A:116 A:116 0.0 0.0 E -117.1 120.9 0.0 0.0 0.0 HOH
 5.741
 C
 O
1jyj 1 P02753 98.9 8e-136 X-RAY
 2003-07-01 VAL A:117 A:116 0.0 0.0 E -122.5 119.9 0.0 0.0 0.0 GOL
HOH
 9.349
5.516
 C
C
 O2
O
1qab 2 P02753 98.33 2e-133 X-RAY
 1999-02-16 VAL E:113 E:116 2.0 0.013 E -76.5 -174.9 2.0 0.013 0.0 RTL
 9.138
 O
 C16
VAL F:113 F:116 3.0 0.019 E -157.3 117.1 3.0 0.019 0.0 RTL
 9.590
 C
 C16
3bsz 2 P02753 100.0 3e-133 X-RAY
 2008-11-11 VAL E:116 E:116 1.0 0.006 E -130.3 122.6 1.0 0.006 0.0 RTL
HOH
 9.491
9.295
 C
N
 C16
O
VAL F:116 F:116 2.0 0.013 E -130.1 120.1 2.0 0.013 0.0 RTL
HOH
 9.217
2.857
 C
CG2
 C16
O
2wqa 2 P02753 99.44 3e-133 X-RAY
 2010-09-01 VAL E:117 E:116 0.0 0.0 E -118.8 118.4 0.0 0.0 0.0 OLA
SO4
HOH
 8.773
9.933
8.257
 C
O
O
 C18
O3
O
VAL F:117 F:116 0.0 0.0 E -120.8 120.2 0.0 0.0 0.0 OLA
SO4
HOH
 8.599
9.902
8.184
 C
O
O
 C18
O2
O
2wq9 1 P02753 100.0 1e-131 X-RAY
 2010-09-01 VAL A:116 A:116 0.0 0.0 E -121.5 122.4 0.0 0.0 0.0 OLA
GOL
HOH
 8.574
7.119
5.692
 C
CB
C
 C18
C1
O
2wr6 1 P02753 99.43 1e-131 X-RAY
 2010-09-15 VAL A:117 A:116 0.0 0.0 E -118.0 121.8 0.0 0.0 0.0 ODT
HOH
 8.969
5.735
 C
C
 C18
O
1aqb 1 P27485 92.9 7e-131 X-RAY
 1998-01-28 VAL A:116 A:116 1.0 0.006 E -117.5 120.8 1.0 0.006 0.0 RTL
HOH
 9.567
5.961
 C
C
 C16
O
1hbq 1 P18902 92.35 4e-130 X-RAY
 1994-01-31 VAL A:116 A:116 0.0 0.0 E -125.1 119.8 0.0 0.0 0.0 HOH
 7.873
 CB
 O
1erb 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 VAL A:116 A:116 0.0 0.0 E -122.6 118.4 0.0 0.0 0.0 ETR
HOH
 9.657
7.811
 C
CB
 C16
O
1fel 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 VAL A:116 A:116 0.0 0.0 E -123.3 117.1 0.0 0.0 0.0 FEN
HOH
 9.581
8.075
 C
CG2
 C16
O
1fem 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 VAL A:116 A:116 0.0 0.0 E -113.2 121.0 0.0 0.0 0.0 REA
HOH
 9.350
7.650
 C
O
 C16
O
1fen 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 VAL A:116 A:116 0.0 0.0 E -125.1 123.6 0.0 0.0 0.0 AZE
HOH
 9.296
6.957
 C
CG2
 C16
O
1hbp 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 VAL A:116 A:116 0.0 0.0 E -125.6 115.8 0.0 0.0 0.0 RTL
HOH
 9.848
7.484
 C
CB
 C16
O
1kt3 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 VAL A:116 A:116 1.0 0.006 E -116.7 118.0 1.0 0.006 0.0 RTL
HOH
 9.967
6.001
 C
C
 C16
O
1kt4 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 VAL A:116 A:116 0.0 0.0 E -120.4 121.8 0.0 0.0 0.0 RTL
HOH
 9.426
5.684
 C
C
 C16
O
1kt6 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 VAL A:116 A:116 0.0 0.0 E -117.0 119.8 0.0 0.0 0.0 RTL
HOH
 9.726
3.100
 C
C
 C16
O
1kt7 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 VAL A:116 A:116 0.0 0.0 E -118.0 119.6 0.0 0.0 0.0 RTL
HOH
 9.589
5.736
 C
C
 C16
O
1kt5 1 P18902 93.14 1e-124 X-RAY
 2003-06-03 VAL A:116 A:116 0.0 0.0 E -117.2 121.3 0.0 0.0 0.0 RTL
HOH
 9.504
5.747
 C
C
 C16
O
1rlb 2 P02753 92.53 2e-123 X-RAY
 1996-04-11 VAL E:116 E:116 1.0 0.006 E -82.4 151.3 1.0 0.006 0.0 REA
 9.624
 C
 C16
VAL F:116 F:116 0.0 0.0 E -97.7 145.4 0.0 0.0 0.0 REA
 9.286
 C
 C16
1iiu 1 P41263 87.21 3e-116 X-RAY
 2002-01-16 LEU A:115 A:116 0.0 0.0 E -124.1 112.3 0.0 0.0 0.0 RTL
HOH
 9.682
7.498
 C
CB
 C16
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02753-f1 1 P02753 100.0 2e-152 VAL A:134 A:134 0.0 0.0 E -113.9 116.8