Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 95353754 . A C CCDS31249.1:NM_006744.3:c.394Tat>Gat_NP_006735.2:p.132Y>D Homo sapiens retinol binding protein 4 (RBP4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4o9s 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 TYR A:146 A:114 7.0 0.03 E -131.2 169.6 7.0 0.03 0.0 EDO
EDO
HOH
 9.345
7.376
2.702
 OH
OH
OH
 O1
O2
O
TYR B:146 B:114 6.0 0.026 E -120.5 169.8 NA NA NA
3fmz 1 P02753 98.92 2e-139 X-RAY
 2009-01-27 TYR A:143 A:114 5.0 0.022 E -130.7 179.3 5.0 0.022 0.0 HOH
 4.617
 N
 O
TYR B:143 B:114 5.0 0.022 E -169.1 161.0 NA NA NA
4psq 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 TYR A:143 B:114 5.0 0.022 E -131.5 164.7 5.0 0.022 0.0 PO4
EDO
EDO
EDO
HOH
 8.130
9.131
8.577
3.069
4.060
 OH
OH
N
OH
CE1
 O1
O1
O2
O1
O
TYR B:143 A:114 4.0 0.017 E -134.3 166.2 NA NA NA
6qba 1 P02753 100.0 2e-138 X-RAY
 2020-06-03 TYR A:116 A:114 12.0 0.052 E -143.2 162.9 12.0 0.052 0.0 IMD
IMD
IMD
PEG
ZN
HOH
 6.563
9.551
3.310
6.915
6.939
3.466
 HH
HB3
HH
HB2
HH
HE1
 HN3
H2
HN1
H42
ZN
O
1jyd 1 P02753 100.0 8e-138 X-RAY
 2003-07-01 TYR A:115 A:114 12.0 0.052 E -135.1 161.7 12.0 0.052 0.0 HOH
 3.074
 OH
 O
1brp 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 TYR A:114 A:114 16.0 0.07 E -128.1 167.0 16.0 0.07 0.0 HOH
 7.772
 OH
 O
1brq 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 TYR A:114 A:114 20.0 0.087 E -137.8 165.2 20.0 0.087 0.0 HOH
 7.593
 OH
 O
1rbp 1 P02753 100.0 8e-138 X-RAY
 1991-07-15 TYR A:114 A:114 14.0 0.061 E -143.1 150.9 14.0 0.061 0.0 HOH
 4.533
 CE2
 O
5nty 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:114 A:114 13.0 0.057 E -133.6 154.7 13.0 0.057 0.0 HOH
 6.853
 OH
 O
5nu2 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:114 A:114 12.0 0.052 E -133.6 156.3 12.0 0.052 0.0 HOH
 2.590
 OH
 O
5nu6 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:114 A:114 13.0 0.057 E -133.3 157.3 13.0 0.057 0.0 HOH
 2.540
 OH
 O
5nu7 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:114 A:114 13.0 0.057 E -133.9 156.5 13.0 0.057 0.0 HOH
 6.748
 OH
 O
5nu8 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:114 A:114 11.0 0.048 E -133.0 156.7 11.0 0.048 0.0 HOH
 2.698
 OH
 O
5nu9 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:114 A:114 12.0 0.052 E -135.9 156.5 12.0 0.052 0.0 HOH
 2.782
 OH
 O
5nua 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:114 A:114 13.0 0.057 E -134.3 156.1 13.0 0.057 0.0 HOH
 2.670
 OH
 O
5nub 1 P02753 100.0 8e-138 X-RAY
 2018-03-14 TYR A:114 A:114 12.0 0.052 E -135.8 155.6 12.0 0.052 0.0 HOH
 2.663
 OH
 O
1jyj 1 P02753 98.9 8e-136 X-RAY
 2003-07-01 TYR A:115 A:114 13.0 0.057 E -134.6 161.8 13.0 0.057 0.0 HOH
 3.003
 OH
 O
1qab 2 P02753 98.33 2e-133 X-RAY
 1999-02-16 TYR E:111 E:114 13.0 0.057 93.8 73.0 13.0 0.057 0.0
TYR F:111 F:114 26.0 0.113 -136.7 167.4 26.0 0.113 0.0
3bsz 2 P02753 100.0 3e-133 X-RAY
 2008-11-11 TYR E:114 E:114 24.0 0.104 E -123.8 163.6 24.0 0.104 0.0 HOH
 5.649
 OH
 O
TYR F:114 F:114 21.0 0.091 E -125.5 166.7 21.0 0.091 0.0 HOH
 2.892
 OH
 O
2wqa 2 P02753 99.44 3e-133 X-RAY
 2010-09-01 TYR E:115 E:114 10.0 0.043 E -141.5 157.6 10.0 0.043 0.0 SO4
HOH
 6.651
5.810
 OH
CD2
 O3
O
TYR F:115 F:114 10.0 0.043 E -144.1 152.4 10.0 0.043 0.0 SO4
SO4
SO4
HOH
 7.652
6.507
8.165
2.725
 OH
OH
OH
OH
 O2
O2
O2
O
2wq9 1 P02753 100.0 1e-131 X-RAY
 2010-09-01 TYR A:114 A:114 11.0 0.048 E -135.6 159.9 11.0 0.048 0.0 GOL
HOH
 6.408
2.787
 OH
OH
 O3
O
2wr6 1 P02753 99.43 1e-131 X-RAY
 2010-09-15 TYR A:115 A:114 11.0 0.048 E -132.2 158.9 11.0 0.048 0.0 HOH
 2.750
 OH
 O
1aqb 1 P27485 92.9 7e-131 X-RAY
 1998-01-28 TYR A:114 A:114 15.0 0.065 E -138.3 164.3 15.0 0.065 0.0 HOH
 2.664
 OH
 O
1hbq 1 P18902 92.35 4e-130 X-RAY
 1994-01-31 PHE A:114 A:114 9.0 0.043 E -145.4 168.5 9.0 0.043 0.0 HOH
 3.421
 CE1
 O
1erb 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 PHE A:114 A:114 10.0 0.048 E -141.8 164.8 10.0 0.048 0.0 HOH
 4.412
 CZ
 O
1fel 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 PHE A:114 A:114 12.0 0.057 E -149.3 162.5 12.0 0.057 0.0 HOH
 4.718
 N
 O
1fem 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 PHE A:114 A:114 8.0 0.038 E -143.9 171.6 8.0 0.038 0.0 HOH
 4.460
 CE1
 O
1fen 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 PHE A:114 A:114 9.0 0.043 E -139.4 167.8 9.0 0.043 0.0 HOH
 3.965
 CZ
 O
1hbp 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 PHE A:114 A:114 8.0 0.038 E -149.0 167.0 8.0 0.038 0.0 HOH
 4.350
 CZ
 O
1kt3 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 PHE A:114 A:114 9.0 0.043 E -137.8 160.0 9.0 0.043 0.0 HOH
 4.323
 CE1
 O
1kt4 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 PHE A:114 A:114 7.0 0.033 E -138.2 163.5 7.0 0.033 0.0 HOH
 4.413
 CZ
 O
1kt6 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 PHE A:114 A:114 6.0 0.029 E -136.7 159.3 6.0 0.029 0.0 HOH
 4.257
 CE1
 O
1kt7 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 PHE A:114 A:114 11.0 0.052 E -142.1 161.4 11.0 0.052 0.0 HOH
 4.405
 CZ
 O
1kt5 1 P18902 93.14 1e-124 X-RAY
 2003-06-03 PHE A:114 A:114 12.0 0.057 E -137.9 164.5 12.0 0.057 0.0 HOH
 4.178
 CZ
 O
1rlb 2 P02753 92.53 2e-123 X-RAY
 1996-04-11 PHE E:114 E:114 4.0 0.019 -144.8 -173.6 4.0 0.019 0.0
PHE F:114 F:114 2.0 0.01 E -153.6 -178.6 2.0 0.01 0.0
1iiu 1 P41263 87.21 3e-116 X-RAY
 2002-01-16 TYR A:113 A:114 19.0 0.083 E -152.8 153.4 19.0 0.083 0.0 HOH
 6.704
 CE1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02753-f1 1 P02753 100.0 2e-152 TYR A:132 A:132 10.0 0.043 E -143.0 157.7