Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 95353765 . T A CCDS31249.1:NM_006744.3:c.383gAc>gTc_NP_006735.2:p.128D>V Homo sapiens retinol binding protein 4 (RBP4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4o9s 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 ASP A:142 A:110 51.0 0.34 -110.7 6.5 51.0 0.34 0.0 EDO
HOH
 9.623
2.971
 N
OD2
 O1
O
ASP B:142 B:110 56.0 0.373 -112.3 7.7 NA NA NA
3fmz 1 P02753 98.92 2e-139 X-RAY
 2009-01-27 ASP A:139 A:110 43.0 0.287 -140.5 17.5 43.0 0.287 0.0 HOH
 7.066
 OD2
 O
ASP B:139 B:110 43.0 0.287 -117.4 10.8 NA NA NA
4psq 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 ASP A:139 B:110 48.0 0.32 -116.2 6.6 48.0 0.32 0.0 PO4
EDO
EDO
HOH
 5.509
7.084
3.490
2.955
 CA
O
CB
OD2
 O2
C1
O1
O
ASP B:139 A:110 51.0 0.34 -117.8 10.2 NA NA NA
6qba 1 P02753 100.0 2e-138 X-RAY
 2020-06-03 ASP A:112 A:110 50.0 0.333 -108.1 8.1 50.0 0.333 0.0 IMD
IMD
ZN
HOH
 9.128
4.519
9.356
2.708
 N
HB3
HA
OD2
 HN3
HN1
ZN
O
1jyd 1 P02753 100.0 8e-138 X-RAY
 2003-07-01 ASP A:111 A:110 47.0 0.313 -117.2 11.5 47.0 0.313 0.0 HOH
 2.570
 OD2
 O
1brp 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 ASP A:110 A:110 49.0 0.327 -136.4 21.0 49.0 0.327 0.0 HOH
 5.448
 O
 O
1brq 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 ASP A:110 A:110 53.0 0.353 -122.1 4.1 53.0 0.353 0.0 HOH
 5.174
 O
 O
1rbp 1 P02753 100.0 8e-138 X-RAY
 1991-07-15 ASP A:110 A:110 55.0 0.367 -117.0 19.1 55.0 0.367 0.0 HOH
 3.005
 CA
 O
5nty 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:110 A:110 46.0 0.307 -116.4 9.0 46.0 0.307 0.0 HOH
 3.987
 CA
 O
5nu2 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:110 A:110 46.0 0.307 -114.1 11.3 46.0 0.307 0.0 HOH
 2.635
 O
 O
5nu6 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:110 A:110 47.0 0.313 -113.9 11.4 47.0 0.313 0.0 HOH
 3.891
 CB
 O
5nu7 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:110 A:110 47.0 0.313 -114.6 9.8 47.0 0.313 0.0 HOH
 3.879
 CA
 O
5nu8 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:110 A:110 47.0 0.313 -115.2 12.3 47.0 0.313 0.0 HOH
 2.854
 OD2
 O
5nu9 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:110 A:110 47.0 0.313 -112.8 10.7 47.0 0.313 0.0 HOH
 2.873
 OD2
 O
5nua 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:110 A:110 48.0 0.32 -114.3 11.7 48.0 0.32 0.0 HOH
 2.784
 OD2
 O
5nub 1 P02753 100.0 8e-138 X-RAY
 2018-03-14 ASP A:110 A:110 46.0 0.307 -113.6 10.7 46.0 0.307 0.0 HOH
 2.829
 OD2
 O
1jyj 1 P02753 98.9 8e-136 X-RAY
 2003-07-01 ASP A:111 A:110 47.0 0.313 -117.4 14.9 47.0 0.313 0.0 HOH
 2.847
 O
 O
1qab 2 P02753 98.33 2e-133 X-RAY
 1999-02-16 ASP E:107 E:110 100.0 0.667 -170.4 42.1 100.0 0.667 0.0
ASP F:107 F:110 106.0 0.707 -80.0 2.3 106.0 0.707 0.0
3bsz 2 P02753 100.0 3e-133 X-RAY
 2008-11-11 ASP E:110 E:110 44.0 0.293 -127.1 9.8 44.0 0.293 0.0 HOH
 4.433
 CA
 O
ASP F:110 F:110 49.0 0.327 -127.9 13.7 49.0 0.327 0.0 HOH
 4.379
 N
 O
2wqa 2 P02753 99.44 3e-133 X-RAY
 2010-09-01 ASP E:111 E:110 52.0 0.347 -118.9 13.8 52.0 0.347 0.0 SO4
HOH
 7.588
4.787
 N
OD2
 O4
O
ASP F:111 F:110 58.0 0.387 -127.0 -18.1 58.0 0.387 0.0 SO4
SO4
HOH
 4.867
7.798
3.371
 O
N
OD1
 O2
O1
O
2wq9 1 P02753 100.0 1e-131 X-RAY
 2010-09-01 ASP A:110 A:110 46.0 0.307 -111.2 12.7 46.0 0.307 0.0 GOL
HOH
 7.685
2.635
 N
O
 O3
O
2wr6 1 P02753 99.43 1e-131 X-RAY
 2010-09-15 ASP A:111 A:110 48.0 0.32 -114.6 10.9 48.0 0.32 0.0 HOH
 2.686
 O
 O
1aqb 1 P27485 92.9 7e-131 X-RAY
 1998-01-28 ASP A:110 A:110 47.0 0.313 -110.9 5.0 47.0 0.313 0.0 HOH
 2.676
 O
 O
1hbq 1 P18902 92.35 4e-130 X-RAY
 1994-01-31 ASP A:110 A:110 55.0 0.367 -111.5 4.3 55.0 0.367 0.0 HOH
 2.665
 OD2
 O
1erb 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 ASP A:110 A:110 55.0 0.367 -115.7 6.4 55.0 0.367 0.0 HOH
 3.069
 OD2
 O
1fel 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ASP A:110 A:110 62.0 0.413 -115.7 8.3 62.0 0.413 0.0 HOH
 3.846
 O
 O
1fem 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ASP A:110 A:110 56.0 0.373 -124.0 1.3 56.0 0.373 0.0 HOH
 3.016
 OD2
 O
1fen 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ASP A:110 A:110 54.0 0.36 -115.1 4.3 54.0 0.36 0.0 HOH
 2.378
 O
 O
1hbp 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 ASP A:110 A:110 56.0 0.373 -111.7 8.4 56.0 0.373 0.0 HOH
 2.895
 O
 O
1kt3 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ASP A:110 A:110 52.0 0.347 -112.2 9.6 52.0 0.347 0.0 HOH
 2.891
 OD2
 O
1kt4 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ASP A:110 A:110 49.0 0.327 -110.7 12.8 49.0 0.327 0.0 HOH
 3.240
 OD2
 O
1kt6 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ASP A:110 A:110 45.0 0.3 -109.3 12.9 45.0 0.3 0.0 HOH
 4.627
 O
 O
1kt7 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ASP A:110 A:110 51.0 0.34 -110.6 1.9 51.0 0.34 0.0 HOH
 2.839
 O
 O
1kt5 1 P18902 93.14 1e-124 X-RAY
 2003-06-03 ASP A:110 A:110 36.0 0.24 -104.2 1.9 36.0 0.24 0.0 HOH
 4.104
 CA
 O
1rlb 2 P02753 92.53 2e-123 X-RAY
 1996-04-11 ASP E:110 E:110 45.0 0.3 -87.4 102.5 45.0 0.3 0.0
ASP F:110 F:110 43.0 0.287 -106.9 21.6 43.0 0.287 0.0
1iiu 1 P41263 87.21 3e-116 X-RAY
 2002-01-16 ASP A:109 A:110 47.0 0.313 -113.0 14.6 47.0 0.313 0.0 HOH
 3.596
 OD2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02753-f1 1 P02753 100.0 2e-152 ASP A:128 A:128 49.0 0.327 -98.7 4.9