Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 95360152 . C A CCDS31249.1:NM_006744.3:c.353gGa>gTa_NP_006735.2:p.118G>V Homo sapiens retinol binding protein 4 (RBP4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4o9s 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 GLY A:132 A:100 19.0 0.253 E -151.8 -179.1 19.0 0.253 0.0 2RY
EDO
HOH
 6.734
8.145
3.332
 CA
N
CA
 C17
C2
O
GLY B:132 B:100 12.0 0.16 E -158.6 171.1 NA NA NA
3fmz 1 P02753 98.92 2e-139 X-RAY
 2009-01-27 GLY A:129 A:100 16.0 0.213 E -158.1 165.3 16.0 0.213 0.0 2T1
 6.741
 CA
 O3
GLY B:129 B:100 12.0 0.16 E -154.0 174.4 NA NA NA
4psq 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 GLY A:129 B:100 21.0 0.28 E -101.3 170.6 21.0 0.28 0.0 2WL
HOH
 3.501
3.770
 N
CA
 C17
O
GLY B:129 A:100 22.0 0.293 E -98.6 173.7 NA NA NA
6qba 1 P02753 100.0 2e-138 X-RAY
 2020-06-03 GLY A:102 A:100 27.0 0.36 E 173.7 -169.7 27.0 0.36 0.0 2T1
HOH
 5.084
2.910
 HA3
HA3
 O2
O
1jyd 1 P02753 100.0 8e-138 X-RAY
 2003-07-01 GLY A:101 A:100 28.0 0.373 E 173.6 -169.8 28.0 0.373 0.0 GOL
GOL
HOH
 9.217
7.579
3.437
 CA
N
O
 C1
C1
O
1brp 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 GLY A:100 A:100 29.0 0.387 E 172.6 -178.7 29.0 0.387 0.0 RTL
HOH
 7.951
6.815
 O
N
 C18
O
1brq 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 GLY A:100 A:100 29.0 0.387 E 171.7 -174.4 29.0 0.387 0.0 HOH
 6.633
 N
 O
1rbp 1 P02753 100.0 8e-138 X-RAY
 1991-07-15 GLY A:100 A:100 28.0 0.373 E -174.4 -173.5 28.0 0.373 0.0 RTL
HOH
 7.886
3.222
 N
O
 C19
O
5nty 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:100 A:100 32.0 0.427 E 170.9 -156.8 32.0 0.427 0.0 PLM
HOH
 7.267
3.569
 N
CA
 C6
O
5nu2 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:100 A:100 30.0 0.4 E 167.0 -162.7 30.0 0.4 0.0 PLM
HOH
 7.388
3.516
 N
CA
 C5
O
5nu6 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:100 A:100 29.0 0.387 E 167.6 -165.0 29.0 0.387 0.0 PLM
HOH
 7.539
3.476
 N
CA
 C5
O
5nu7 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:100 A:100 29.0 0.387 E 172.3 -162.9 29.0 0.387 0.0 RTL
HOH
 7.973
3.512
 N
CA
 C10
O
5nu8 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:100 A:100 30.0 0.4 E 167.1 -163.8 30.0 0.4 0.0 PLM
HOH
 7.546
3.563
 N
CA
 C5
O
5nu9 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:100 A:100 28.0 0.373 E 171.4 -169.9 28.0 0.373 0.0 PLM
HOH
 7.413
3.458
 N
CA
 C5
O
5nua 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:100 A:100 29.0 0.387 E 163.8 -159.0 29.0 0.387 0.0 DAO
HOH
 7.389
3.516
 N
CA
 C5
O
5nub 1 P02753 100.0 8e-138 X-RAY
 2018-03-14 GLY A:100 A:100 30.0 0.4 E 171.2 -169.0 30.0 0.4 0.0 DAO
HOH
 7.503
3.497
 N
CA
 C5
O
1jyj 1 P02753 98.9 8e-136 X-RAY
 2003-07-01 GLY A:101 A:100 31.0 0.413 E 166.3 -157.3 31.0 0.413 0.0 GOL
GOL
HOH
 9.877
7.527
3.532
 N
N
CA
 O1
O2
O
1qab 2 P02753 98.33 2e-133 X-RAY
 1999-02-16 GLY E:97 E:100 28.0 0.373 E -155.1 -163.9 28.0 0.373 0.0 RTL
 7.605
 O
 C18
GLY F:97 F:100 22.0 0.293 E 168.2 -165.5 21.0 0.28 0.013 A:P02766:0.013
 RTL
 7.656
 N
 C11
3bsz 2 P02753 100.0 3e-133 X-RAY
 2008-11-11 GLY E:100 E:100 20.0 0.267 E -179.8 173.3 20.0 0.267 0.0 RTL
HOH
 7.449
3.735
 O
CA
 C18
O
GLY F:100 F:100 18.0 0.24 E -177.8 173.6 18.0 0.24 0.0 RTL
HOH
 7.355
6.021
 O
N
 C18
O
2wqa 2 P02753 99.44 3e-133 X-RAY
 2010-09-01 GLY E:101 E:100 20.0 0.267 E 170.4 -173.4 20.0 0.267 0.0 OLA
HOH
 7.525
8.143
 N
O
 C7
O
GLY F:101 F:100 23.0 0.307 E 160.5 -175.5 23.0 0.307 0.0 OLA
HOH
 7.553
7.673
 O
N
 C8
O
2wq9 1 P02753 100.0 1e-131 X-RAY
 2010-09-01 GLY A:100 A:100 28.0 0.373 E 169.2 -166.1 28.0 0.373 0.0 OLA
HOH
 7.279
3.388
 N
CA
 C5
O
2wr6 1 P02753 99.43 1e-131 X-RAY
 2010-09-15 GLY A:101 A:100 27.0 0.36 E 175.7 -169.1 27.0 0.36 0.0 ODT
HOH
 7.323
3.665
 N
O
 C5
O
1aqb 1 P27485 92.9 7e-131 X-RAY
 1998-01-28 GLY A:100 A:100 24.0 0.32 E -173.3 -171.9 24.0 0.32 0.0 RTL
HOH
 7.631
3.645
 N
O
 C19
O
1hbq 1 P18902 92.35 4e-130 X-RAY
 1994-01-31 GLY A:100 A:100 26.0 0.347 E 174.1 -160.3 26.0 0.347 0.0 HOH
 3.655
 O
 O
1erb 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 GLY A:100 A:100 21.0 0.28 E 177.7 -166.2 21.0 0.28 0.0 ETR
HOH
 7.744
3.456
 N
O
 C19
O
1fel 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 GLY A:100 A:100 25.0 0.333 E 175.0 -172.2 25.0 0.333 0.0 FEN
HOH
 8.285
4.389
 N
CA
 C11
O
1fem 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 GLY A:100 A:100 20.0 0.267 E -177.4 -172.8 20.0 0.267 0.0 REA
HOH
 7.376
3.328
 N
O
 C19
O
1fen 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 GLY A:100 A:100 26.0 0.347 E -179.5 -169.5 26.0 0.347 0.0 AZE
HOH
 8.401
3.354
 N
O
 C11
O
1hbp 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 GLY A:100 A:100 23.0 0.307 E -174.5 -171.5 23.0 0.307 0.0 RTL
HOH
 7.420
3.646
 N
O
 C19
O
1kt3 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 GLY A:100 A:100 21.0 0.28 E 177.5 -164.1 21.0 0.28 0.0 RTL
HOH
 7.900
3.634
 N
CA
 C19
O
1kt4 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 GLY A:100 A:100 17.0 0.227 E -176.3 -167.6 17.0 0.227 0.0 RTL
HOH
 7.761
3.335
 N
CA
 C19
O
1kt6 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 GLY A:100 A:100 18.0 0.24 E -177.9 -169.7 18.0 0.24 0.0 RTL
HOH
 7.665
3.398
 N
CA
 C19
O
1kt7 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 GLY A:100 A:100 27.0 0.36 E -178.8 -168.7 27.0 0.36 0.0 RTL
HOH
 7.657
3.311
 N
CA
 C19
O
1kt5 1 P18902 93.14 1e-124 X-RAY
 2003-06-03 GLY A:100 A:100 29.0 0.387 E 174.3 -167.6 29.0 0.387 0.0 RTL
HOH
 7.639
3.351
 N
CA
 C19
O
1rlb 2 P02753 92.53 2e-123 X-RAY
 1996-04-11 GLY E:100 E:100 25.0 0.333 E -175.3 -176.6 25.0 0.333 0.0 REA
 7.860
 N
 C11
GLY F:100 F:100 23.0 0.307 E -170.8 -178.6 23.0 0.307 0.0 REA
 8.088
 N
 C11
1iiu 1 P41263 87.21 3e-116 X-RAY
 2002-01-16 GLY A:99 A:100 22.0 0.293 E 165.3 174.4 22.0 0.293 0.0 RTL
HOH
 7.644
3.747
 O
CA
 C19
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02753-f1 1 P02753 100.0 2e-152 GLY A:118 A:118 18.0 0.24 E -168.6 -177.6