Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 95360227 . C A CCDS31249.1:NM_006744.3:c.278gGc>gTc_NP_006735.2:p.93G>V Homo sapiens retinol binding protein 4 (RBP4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4o9s 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 GLY A:107 A:75 4.0 0.053 E -148.6 151.8 4.0 0.053 0.0 2RY
EDO
EDO
HOH
 3.603
8.723
8.132
4.649
 N
N
CA
O
 C13
O1
C2
O
GLY B:107 B:75 5.0 0.067 E -156.4 155.7 NA NA NA
3fmz 1 P02753 98.92 2e-139 X-RAY
 2009-01-27 GLY A:104 A:75 6.0 0.08 E -121.1 156.9 6.0 0.08 0.0 2T1
 3.577
 N
 C6
GLY B:104 B:75 2.0 0.027 E -148.2 141.5 NA NA NA
4psq 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 GLY A:104 B:75 4.0 0.053 E -140.4 145.8 4.0 0.053 0.0 2WL
HOH
 3.907
4.481
 N
O
 C5
O
GLY B:104 A:75 4.0 0.053 E -140.6 146.2 NA NA NA
6qba 1 P02753 100.0 2e-138 X-RAY
 2020-06-03 GLY A:77 A:75 4.0 0.053 E -132.9 144.0 4.0 0.053 0.0 2T1
HOH
 3.078
6.440
 H
H
 H6
O
1jyd 1 P02753 100.0 8e-138 X-RAY
 2003-07-01 GLY A:76 A:75 5.0 0.067 E -146.7 138.6 5.0 0.067 0.0 GOL
GOL
HOH
 4.042
6.544
3.598
 CA
CA
O
 O3
O3
O
1brp 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 GLY A:75 A:75 6.0 0.08 E -120.9 156.2 6.0 0.08 0.0 RTL
HOH
 3.836
5.815
 CA
O
 C18
O
1brq 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 GLY A:75 A:75 7.0 0.093 E -126.3 161.8 7.0 0.093 0.0 HOH
 4.267
 N
 O
1rbp 1 P02753 100.0 8e-138 X-RAY
 1991-07-15 GLY A:75 A:75 6.0 0.08 E -127.5 132.8 6.0 0.08 0.0 RTL
HOH
 3.891
5.772
 N
O
 C18
O
5nty 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:75 A:75 5.0 0.067 E -137.8 138.5 5.0 0.067 0.0 PLM
HOH
 3.987
6.750
 N
O
 CA
O
5nu2 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:75 A:75 5.0 0.067 E -132.2 144.2 5.0 0.067 0.0 PLM
HOH
 3.834
3.555
 N
O
 CA
O
5nu6 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:75 A:75 5.0 0.067 E -137.0 142.7 5.0 0.067 0.0 PLM
HOH
 4.116
5.266
 N
O
 CA
O
5nu7 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:75 A:75 5.0 0.067 E -135.6 138.6 5.0 0.067 0.0 RTL
HOH
 4.536
6.860
 N
O
 C18
O
5nu8 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:75 A:75 5.0 0.067 E -136.1 141.9 5.0 0.067 0.0 PLM
HOH
 3.866
3.612
 N
O
 CA
O
5nu9 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:75 A:75 5.0 0.067 E -137.9 142.0 5.0 0.067 0.0 PLM
HOH
 3.833
5.287
 N
O
 CA
O
5nua 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 GLY A:75 A:75 4.0 0.053 E -139.8 140.7 4.0 0.053 0.0 DAO
HOH
 4.399
3.734
 N
O
 C9
O
5nub 1 P02753 100.0 8e-138 X-RAY
 2018-03-14 GLY A:75 A:75 4.0 0.053 E -136.3 140.9 4.0 0.053 0.0 DAO
HOH
 4.519
3.754
 N
O
 C9
O
1jyj 1 P02753 98.9 8e-136 X-RAY
 2003-07-01 GLY A:76 A:75 5.0 0.067 E -134.7 143.2 5.0 0.067 0.0 GOL
GOL
HOH
 4.763
4.870
3.610
 CA
N
O
 O1
O1
O
1qab 2 P02753 98.33 2e-133 X-RAY
 1999-02-16 GLY E:72 E:75 3.0 0.04 E -148.7 131.2 3.0 0.04 0.0 RTL
 4.528
 N
 C18
GLY F:72 F:75 2.0 0.027 E -160.2 128.4 2.0 0.027 0.0 RTL
 3.880
 CA
 C18
3bsz 2 P02753 100.0 3e-133 X-RAY
 2008-11-11 GLY E:75 E:75 3.0 0.04 E -153.9 139.0 3.0 0.04 0.0 RTL
HOH
 4.439
5.376
 N
O
 C18
O
GLY F:75 F:75 4.0 0.053 E -153.0 140.3 4.0 0.053 0.0 RTL
HOH
 4.475
6.567
 N
O
 C18
O
2wqa 2 P02753 99.44 3e-133 X-RAY
 2010-09-01 GLY E:76 E:75 6.0 0.08 E -137.2 145.6 6.0 0.08 0.0 OLA
HOH
 3.573
6.777
 N
C
 C10
O
GLY F:76 F:75 5.0 0.067 E -142.5 147.4 5.0 0.067 0.0 OLA
 3.785
 N
 C11
2wq9 1 P02753 100.0 1e-131 X-RAY
 2010-09-01 GLY A:75 A:75 5.0 0.067 E -136.0 140.2 5.0 0.067 0.0 OLA
HOH
 3.615
3.661
 N
O
 C11
O
2wr6 1 P02753 99.43 1e-131 X-RAY
 2010-09-15 GLY A:76 A:75 4.0 0.053 E -151.3 147.2 4.0 0.053 0.0 ODT
HOH
 3.706
3.486
 N
O
 C9
O
1aqb 1 P27485 92.9 7e-131 X-RAY
 1998-01-28 GLY A:75 A:75 5.0 0.067 E -138.5 146.2 5.0 0.067 0.0 RTL
HOH
 4.326
5.445
 N
O
 C18
O
1hbq 1 P18902 92.35 4e-130 X-RAY
 1994-01-31 GLY A:75 A:75 3.0 0.04 E -145.1 142.2 3.0 0.04 0.0 HOH
 6.299
 C
 O
1erb 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 GLY A:75 A:75 5.0 0.067 E -139.1 140.5 5.0 0.067 0.0 ETR
HOH
 4.397
6.121
 CA
C
 C18
O
1fel 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 GLY A:75 A:75 3.0 0.04 E -146.6 139.4 3.0 0.04 0.0 FEN
HOH
 4.266
5.268
 N
O
 C18
O
1fem 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 GLY A:75 A:75 3.0 0.04 E -141.4 142.3 3.0 0.04 0.0 REA
HOH
 4.211
6.007
 CA
C
 C18
O
1fen 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 GLY A:75 A:75 5.0 0.067 E -141.5 139.3 5.0 0.067 0.0 AZE
HOH
 3.943
6.170
 N
O
 C18
O
1hbp 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 GLY A:75 A:75 5.0 0.067 E -138.9 139.9 5.0 0.067 0.0 RTL
HOH
 4.471
6.456
 N
C
 C18
O
1kt3 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 GLY A:75 A:75 8.0 0.107 E -135.7 146.0 8.0 0.107 0.0 RTL
HOH
 4.349
5.485
 N
O
 C18
O
1kt4 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 GLY A:75 A:75 5.0 0.067 E -130.2 148.0 5.0 0.067 0.0 RTL
HOH
 4.069
5.184
 N
O
 C18
O
1kt6 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 GLY A:75 A:75 5.0 0.067 E -133.7 144.4 5.0 0.067 0.0 RTL
HOH
 4.133
5.315
 N
O
 C18
O
1kt7 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 GLY A:75 A:75 5.0 0.067 E -134.7 140.7 5.0 0.067 0.0 RTL
HOH
 4.110
5.207
 N
O
 C18
O
1kt5 1 P18902 93.14 1e-124 X-RAY
 2003-06-03 GLY A:75 A:75 5.0 0.067 E -132.9 145.6 5.0 0.067 0.0 RTL
HOH
 4.096
5.215
 N
O
 C18
O
1rlb 2 P02753 92.53 2e-123 X-RAY
 1996-04-11 GLY E:75 E:75 4.0 0.053 E -137.9 145.3 4.0 0.053 0.0 REA
 4.924
 N
 C18
GLY F:75 F:75 5.0 0.067 E -132.2 133.1 5.0 0.067 0.0 REA
 4.358
 CA
 C18
1iiu 1 P41263 87.21 3e-116 X-RAY
 2002-01-16 GLY A:74 A:75 5.0 0.067 E -137.0 152.9 5.0 0.067 0.0 RTL
HOH
 4.028
3.355
 N
C
 C18
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02753-f1 1 P02753 100.0 2e-152 GLY A:93 A:93 6.0 0.08 E -132.6 140.6