Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 95360234 . T A CCDS31249.1:NM_006744.3:c.271Atg>Ttg_NP_006735.2:p.91M>L Homo sapiens retinol binding protein 4 (RBP4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4o9s 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 MET A:105 A:73 38.0 0.205 E -123.2 153.9 38.0 0.205 0.0 2RY
EDO
EDO
CL
CL
HOH
 3.639
5.216
9.979
4.259
8.527
2.975
 CE
O
C
CG
CE
O
 F3
O1
C1
CL
CL
O
MET B:105 B:73 38.0 0.205 E -125.4 155.0 NA NA NA
3fmz 1 P02753 98.92 2e-139 X-RAY
 2009-01-27 MET A:102 A:73 27.0 0.146 E -125.2 171.2 27.0 0.146 0.0 2T1
 3.457
 CE
 C17
MET B:102 B:73 33.0 0.178 E -159.9 157.0 NA NA NA
4psq 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 MET A:102 B:73 50.0 0.27 E -123.3 159.4 50.0 0.27 0.0 2WL
HOH
 3.522
5.882
 CE
O
 C10
O
MET B:102 A:73 48.0 0.259 E -111.6 155.0 NA NA NA
6qba 1 P02753 100.0 2e-138 X-RAY
 2020-06-03 MET A:75 A:73 26.0 0.141 E -133.2 152.8 26.0 0.141 0.0 2T1
HOH
 2.653
2.970
 HE1
O
 H11A
O
1jyd 1 P02753 100.0 8e-138 X-RAY
 2003-07-01 MET A:74 A:73 14.0 0.076 E -113.0 157.2 14.0 0.076 0.0 GOL
GOL
GOL
HOH
 7.251
3.028
7.005
2.612
 CE
CB
CB
O
 C3
O2
C2
O
1brp 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 MET A:73 A:73 23.0 0.124 E -118.7 169.8 23.0 0.124 0.0 RTL
HOH
 3.886
5.545
 SD
O
 C12
O
1brq 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 MET A:73 A:73 14.0 0.076 E -105.3 169.8 14.0 0.076 0.0 HOH
 3.703
 CE
 O
1rbp 1 P02753 100.0 8e-138 X-RAY
 1991-07-15 MET A:73 A:73 24.0 0.13 E -100.3 144.3 24.0 0.13 0.0 RTL
HOH
 3.893
5.295
 CB
O
 C18
O
5nty 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 MET A:73 A:73 13.0 0.07 E -112.8 155.7 13.0 0.07 0.0 PLM
HOH
 3.520
7.141
 CB
C
 C9
O
5nu2 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 MET A:73 A:73 12.0 0.065 E -115.9 155.7 12.0 0.065 0.0 PLM
HOH
 3.767
5.395
 CB
O
 C9
O
5nu6 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 MET A:73 A:73 13.0 0.07 E -113.3 155.3 13.0 0.07 0.0 PLM
HOH
 3.742
7.072
 CB
C
 C9
O
5nu7 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 MET A:73 A:73 24.0 0.13 E -115.9 154.9 24.0 0.13 0.0 RTL
HOH
 3.654
7.133
 CE
C
 C12
O
5nu8 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 MET A:73 A:73 12.0 0.065 E -113.0 156.9 12.0 0.065 0.0 PLM
HOH
 3.628
5.450
 CB
O
 C9
O
5nu9 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 MET A:73 A:73 13.0 0.07 E -115.7 155.2 13.0 0.07 0.0 PLM
HOH
 3.617
5.537
 CB
CE
 C9
O
5nua 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 MET A:73 A:73 13.0 0.07 E -115.5 153.3 13.0 0.07 0.0 DAO
HOH
 4.181
5.456
 CB
O
 C7
O
5nub 1 P02753 100.0 8e-138 X-RAY
 2018-03-14 MET A:73 A:73 13.0 0.07 E -117.4 154.2 13.0 0.07 0.0 DAO
HOH
 4.193
5.592
 CB
CE
 C7
O
1jyj 1 P02753 98.9 8e-136 X-RAY
 2003-07-01 MET A:74 A:73 16.0 0.086 E -115.4 161.8 16.0 0.086 0.0 GOL
GOL
GOL
HOH
 7.269
2.992
5.197
2.782
 CE
CE
CB
O
 C3
O2
O1
O
1qab 2 P02753 98.33 2e-133 X-RAY
 1999-02-16 MET E:70 E:73 28.0 0.151 -83.3 -148.6 28.0 0.151 0.0 RTL
 3.628
 CG
 C10
MET F:70 F:73 26.0 0.141 -112.8 161.4 26.0 0.141 0.0 RTL
 3.129
 CE
 C14
3bsz 2 P02753 100.0 3e-133 X-RAY
 2008-11-11 MET E:73 E:73 27.0 0.146 E -92.6 164.4 27.0 0.146 0.0 RTL
HOH
 3.577
7.431
 CE
CE
 C10
O
MET F:73 F:73 29.0 0.157 E -90.7 166.4 29.0 0.157 0.0 RTL
HOH
 3.537
5.191
 CE
O
 C12
O
2wqa 2 P02753 99.44 3e-133 X-RAY
 2010-09-01 MET E:74 E:73 14.0 0.076 E -94.5 157.3 14.0 0.076 0.0 OLA
 3.609
 CB
 C11
MET F:74 F:73 18.0 0.097 E -100.3 157.6 18.0 0.097 0.0 OLA
HOH
 3.569
5.652
 CB
CE
 C10
O
2wq9 1 P02753 100.0 1e-131 X-RAY
 2010-09-01 MET A:73 A:73 15.0 0.081 E -114.8 156.4 15.0 0.081 0.0 OLA
HOH
 3.726
2.785
 CB
O
 C9
O
2wr6 1 P02753 99.43 1e-131 X-RAY
 2010-09-15 MET A:74 A:73 13.0 0.07 E -114.4 158.2 13.0 0.07 0.0 ODT
HOH
 3.831
2.678
 CB
O
 C8
O
1aqb 1 P27485 92.9 7e-131 X-RAY
 1998-01-28 MET A:73 A:73 25.0 0.135 E -108.4 153.2 25.0 0.135 0.0 RTL
HOH
 3.798
2.939
 CE
O
 C12
O
1hbq 1 P18902 92.35 4e-130 X-RAY
 1994-01-31 MET A:73 A:73 18.0 0.097 E -115.7 155.2 18.0 0.097 0.0 HOH
 5.035
 O
 O
1erb 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 MET A:73 A:73 33.0 0.178 E -115.7 152.0 33.0 0.178 0.0 ETR
HOH
 3.593
5.512
 CE
N
 C12
O
1fel 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 MET A:73 A:73 28.0 0.151 E -116.7 155.6 28.0 0.151 0.0 FEN
HOH
 3.763
6.252
 SD
CE
 C12
O
1fem 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 MET A:73 A:73 31.0 0.168 E -103.8 164.5 31.0 0.168 0.0 REA
HOH
 3.480
5.696
 CE
N
 C12
O
1fen 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 MET A:73 A:73 27.0 0.146 E -118.0 149.3 27.0 0.146 0.0 AZE
HOH
 3.823
5.359
 CE
N
 C12
O
1hbp 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 MET A:73 A:73 30.0 0.162 E -108.8 151.1 30.0 0.162 0.0 RTL
HOH
 3.847
5.277
 CG
O
 C10
O
1kt3 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 MET A:73 A:73 33.0 0.178 E -106.7 158.7 33.0 0.178 0.0 RTL
HOH
 3.918
2.965
 CE
O
 C12
O
1kt4 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 MET A:73 A:73 25.0 0.135 E -105.0 153.9 25.0 0.135 0.0 RTL
HOH
 3.746
2.961
 CE
O
 C12
O
1kt6 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 MET A:73 A:73 28.0 0.151 E -109.2 156.2 28.0 0.151 0.0 RTL
HOH
 3.848
3.080
 CE
O
 C12
O
1kt7 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 MET A:73 A:73 26.0 0.141 E -108.8 155.7 26.0 0.141 0.0 RTL
HOH
 3.764
2.934
 CE
O
 C12
O
1kt5 1 P18902 93.14 1e-124 X-RAY
 2003-06-03 MET A:73 A:73 26.0 0.141 E -104.8 156.7 26.0 0.141 0.0 RTL
HOH
 3.736
2.891
 CE
O
 C12
O
1rlb 2 P02753 92.53 2e-123 X-RAY
 1996-04-11 MET E:73 E:73 23.0 0.124 E -100.0 170.8 23.0 0.124 0.0 REA
 3.529
 CB
 C18
MET F:73 F:73 26.0 0.141 E -95.2 -176.2 26.0 0.141 0.0 REA
 3.349
 CG
 C10
1iiu 1 P41263 87.21 3e-116 X-RAY
 2002-01-16 MET A:72 A:73 29.0 0.157 E -103.0 162.5 29.0 0.157 0.0 RTL
HOH
 3.779
6.039
 CE
CE
 C12
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02753-f1 1 P02753 100.0 2e-152 MET A:91 A:91 33.0 0.178 E -111.6 148.4