Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 95360248 . T A CCDS31249.1:NM_006744.3:c.257gAc>gTc_NP_006735.2:p.86D>V Homo sapiens retinol binding protein 4 (RBP4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4o9s 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 ASP A:100 A:68 51.0 0.34 E -98.2 140.4 51.0 0.34 0.0 EDO
HOH
 9.385
4.663
 N
O
 C1
O
ASP B:100 B:68 53.0 0.353 E -108.7 148.7 NA NA NA
3fmz 1 P02753 98.92 2e-139 X-RAY
 2009-01-27 ASP A:97 A:68 50.0 0.333 E -125.1 104.5 50.0 0.333 0.0
ASP B:97 B:68 59.0 0.393 E -101.3 119.2 NA NA NA
4psq 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 ASP A:97 B:68 44.0 0.293 E -126.3 157.6 44.0 0.293 0.0 HOH
 2.833
 O
 O
ASP B:97 A:68 38.0 0.253 E -134.2 151.7 NA NA NA
6qba 1 P02753 100.0 2e-138 X-RAY
 2020-06-03 ASP A:70 A:68 37.0 0.247 E -104.5 134.2 33.0 0.22 0.027 B:P61991:0.027
 HOH
 2.085
 H
 O
1jyd 1 P02753 100.0 8e-138 X-RAY
 2003-07-01 ASP A:69 A:68 27.0 0.18 E -110.9 -160.4 27.0 0.18 0.0 HOH
 2.636
 N
 O
1brp 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 ASP A:68 A:68 44.0 0.293 E -92.3 102.1 44.0 0.293 0.0 RTL
HOH
 9.505
7.076
 C
OD1
 C15
O
1brq 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 ASP A:68 A:68 44.0 0.293 E -111.4 121.7 44.0 0.293 0.0 HOH
 6.223
 OD1
 O
1rbp 1 P02753 100.0 8e-138 X-RAY
 1991-07-15 ASP A:68 A:68 44.0 0.293 E -134.0 69.8 44.0 0.293 0.0 RTL
HOH
 9.028
8.829
 C
OD1
 O1
O
5nty 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:68 A:68 45.0 0.3 E -96.7 155.0 45.0 0.3 0.0
5nu2 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:68 A:68 38.0 0.253 E -90.3 132.2 38.0 0.253 0.0 HOH
 6.285
 C
 O
5nu6 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:68 A:68 44.0 0.293 E -90.2 154.3 44.0 0.293 0.0
5nu7 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:68 A:68 39.0 0.26 E -94.2 157.8 39.0 0.26 0.0 RTL
 9.772
 C
 C15
5nu8 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:68 A:68 37.0 0.247 E -90.7 133.6 37.0 0.247 0.0
5nu9 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:68 A:68 58.0 0.387 E -81.4 139.6 58.0 0.387 0.0
5nua 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ASP A:68 A:68 77.0 0.513 E -88.7 124.7 77.0 0.513 0.0
5nub 1 P02753 100.0 8e-138 X-RAY
 2018-03-14 ASP A:68 A:68 58.0 0.387 E -85.4 139.5 58.0 0.387 0.0
1jyj 1 P02753 98.9 8e-136 X-RAY
 2003-07-01 ASP A:69 A:68 45.0 0.3 E -112.3 153.9 45.0 0.3 0.0 HOH
 3.507
 O
 O
1qab 2 P02753 98.33 2e-133 X-RAY
 1999-02-16 ASP E:65 E:68 59.0 0.393 -64.1 125.8 54.0 0.36 0.033 A:P02766:0.033
 RTL
 9.067
 C
 O1
ASP F:65 F:68 52.0 0.347 -127.1 139.7 46.0 0.307 0.04 C:P02766:0.04
 RTL
 9.723
 C
 O1
3bsz 2 P02753 100.0 3e-133 X-RAY
 2008-11-11 ASP E:68 E:68 39.0 0.26 -100.0 99.2 38.0 0.253 0.007 C:P02766:0.007
 RTL
HOH
 9.432
3.781
 C
O
 C15
O
ASP F:68 F:68 38.0 0.253 -101.9 100.8 28.0 0.187 0.066 A:P02766:0.067
 RTL
 9.886
 C
 C15
2wqa 2 P02753 99.44 3e-133 X-RAY
 2010-09-01 ASP E:69 E:68 44.0 0.293 E -100.2 136.5 42.0 0.28 0.013 A:P02766:0.013
 HOH
 6.892
 O
 O
ASP F:69 F:68 62.0 0.413 E -97.0 136.7 58.0 0.387 0.026 C:P02766:0.027
 HOH
 3.103
 OD2
 O
2wq9 1 P02753 100.0 1e-131 X-RAY
 2010-09-01 ASP A:68 A:68 32.0 0.213 E -114.2 155.5 32.0 0.213 0.0 HOH
 2.944
 OD1
 O
2wr6 1 P02753 99.43 1e-131 X-RAY
 2010-09-15 ASP A:69 A:68 37.0 0.247 E -133.1 143.3 37.0 0.247 0.0 HOH
 2.549
 OD2
 O
1aqb 1 P27485 92.9 7e-131 X-RAY
 1998-01-28 ASP A:68 A:68 42.0 0.28 E -86.9 128.0 42.0 0.28 0.0 RTL
HOH
 9.910
4.136
 C
OD2
 C15
O
1hbq 1 P18902 92.35 4e-130 X-RAY
 1994-01-31 ASP A:68 A:68 40.0 0.267 E -105.6 140.8 40.0 0.267 0.0 HOH
 7.906
 OD1
 O
1erb 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 ASP A:68 A:68 47.0 0.313 E -107.1 123.0 47.0 0.313 0.0 ETR
HOH
 9.374
7.229
 C
OD2
 C22
O
1fel 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ASP A:68 A:68 55.0 0.367 E -106.3 108.2 55.0 0.367 0.0 FEN
HOH
 8.629
8.471
 N
OD1
 C3'
O
1fem 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ASP A:68 A:68 37.0 0.247 E -101.0 146.1 37.0 0.247 0.0 REA
HOH
 9.162
8.194
 C
C
 O1
O
1fen 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ASP A:68 A:68 40.0 0.267 E -111.6 131.5 40.0 0.267 0.0 HOH
 8.202
 OD1
 O
1hbp 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 ASP A:68 A:68 45.0 0.3 E -98.4 129.0 45.0 0.3 0.0 RTL
HOH
 8.876
7.524
 C
OD1
 O1
O
1kt3 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ASP A:68 A:68 73.0 0.487 E -104.4 105.0 73.0 0.487 0.0 HOH
 2.479
 OD1
 O
1kt4 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ASP A:68 A:68 22.0 0.147 E -101.4 97.4 22.0 0.147 0.0 RTL
HOH
 9.597
3.256
 C
OD2
 C15
O
1kt6 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ASP A:68 A:68 37.0 0.247 E -88.0 123.2 37.0 0.247 0.0 RTL
HOH
 9.603
4.830
 C
O
 C15
O
1kt7 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ASP A:68 A:68 41.0 0.273 E -84.4 131.9 41.0 0.273 0.0 RTL
HOH
 9.464
3.065
 C
O
 C15
O
1kt5 1 P18902 93.14 1e-124 X-RAY
 2003-06-03 ASP A:68 A:68 38.0 0.253 E -102.7 143.9 38.0 0.253 0.0 RTL
HOH
 9.436
5.017
 C
O
 C15
O
1rlb 2 P02753 92.53 2e-123 X-RAY
 1996-04-11 ASP E:68 E:68 29.0 0.193 73.8 87.3 25.0 0.167 0.026 C:P02766:0.027
ASP F:68 F:68 44.0 0.293 E -82.5 84.1 42.0 0.28 0.013 D:P02766:0.013
 REA
 9.751
 C
 C15
1iiu 1 P41263 87.21 3e-116 X-RAY
 2002-01-16 ASP A:67 A:68 56.0 0.373 E -78.7 121.9 56.0 0.373 0.0 HOH
 6.453
 OD2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02753-f1 1 P02753 100.0 2e-152 ASP A:86 A:86 31.0 0.207 E -87.8 114.0