Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 95360449 . C A CCDS31249.1:NM_006744.3:c.223Gcc>Tcc_NP_006735.2:p.75A>S Homo sapiens retinol binding protein 4 (RBP4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4o9s 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 ALA A:89 A:57 36.0 0.313 E -144.3 122.9 36.0 0.313 0.0 2RY
EDO
CL
HOH
 3.561
3.393
6.788
4.633
 CB
N
O
N
 C11
O1
CL
O
ALA B:89 B:57 38.0 0.33 E -134.4 130.2 NA NA NA
3fmz 1 P02753 98.92 2e-139 X-RAY
 2009-01-27 ALA A:86 A:57 30.0 0.261 E -140.1 122.8 30.0 0.261 0.0 2T1
 3.611
 CB
 C1
ALA B:86 B:57 32.0 0.278 E -96.9 140.8 NA NA NA
4psq 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 ALA A:86 B:57 24.0 0.209 E -123.8 131.6 24.0 0.209 0.0 2WL
HOH
 3.922
3.885
 CB
CA
 C4
O
ALA B:86 A:57 25.0 0.217 E -142.8 118.3 NA NA NA
6qba 1 P02753 100.0 2e-138 X-RAY
 2020-06-03 ALA A:59 A:57 29.0 0.252 E -133.8 131.4 29.0 0.252 0.0 2T1
HOH
 2.896
3.465
 HB2
HA
 C5
O
1jyd 1 P02753 100.0 8e-138 X-RAY
 2003-07-01 ALA A:58 A:57 19.0 0.165 E -150.4 148.0 19.0 0.165 0.0 GOL
GOL
GOL
HOH
 8.484
4.035
4.612
3.491
 CB
CB
CB
N
 O3
O2
O2
O
1brp 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 ALA A:57 A:57 23.0 0.2 E -142.0 166.3 23.0 0.2 0.0 RTL
HOH
 3.621
7.105
 CB
O
 C4
O
1brq 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 ALA A:57 A:57 21.0 0.183 E -145.4 174.2 21.0 0.183 0.0 HOH
 3.907
 CB
 O
1rbp 1 P02753 100.0 8e-138 X-RAY
 1991-07-15 ALA A:57 A:57 25.0 0.217 E -123.9 142.6 25.0 0.217 0.0 RTL
HOH
 3.887
4.061
 CB
O
 C5
O
5nty 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ALA A:57 A:57 19.0 0.165 E -142.0 139.3 19.0 0.165 0.0 PLM
HOH
 3.805
7.136
 CB
N
 CA
O
5nu2 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ALA A:57 A:57 17.0 0.148 E -146.6 139.8 17.0 0.148 0.0 PLM
HOH
 4.042
3.771
 CB
N
 CA
O
5nu6 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ALA A:57 A:57 19.0 0.165 E -146.0 138.5 19.0 0.165 0.0 PLM
HOH
 3.623
7.088
 CB
N
 CA
O
5nu7 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ALA A:57 A:57 21.0 0.183 E -145.1 135.0 21.0 0.183 0.0 RTL
HOH
 4.095
7.049
 CB
N
 C4
O
5nu8 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ALA A:57 A:57 18.0 0.157 E -146.3 138.3 18.0 0.157 0.0 PLM
HOH
 4.023
3.778
 CB
N
 CA
O
5nu9 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ALA A:57 A:57 19.0 0.165 E -141.8 142.2 19.0 0.165 0.0 PLM
HOH
 3.738
4.612
 CB
C
 CC
O
5nua 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 ALA A:57 A:57 19.0 0.165 E -144.0 141.9 19.0 0.165 0.0 DAO
HOH
 3.177
3.860
 CB
N
 C10
O
5nub 1 P02753 100.0 8e-138 X-RAY
 2018-03-14 ALA A:57 A:57 19.0 0.165 E -142.9 140.8 19.0 0.165 0.0 DAO
HOH
 3.867
7.028
 CB
N
 C10
O
1jyj 1 P02753 98.9 8e-136 X-RAY
 2003-07-01 ALA A:58 A:57 18.0 0.157 E -151.8 152.7 18.0 0.157 0.0 GOL
GOL
GOL
HOH
 8.679
4.800
3.749
3.666
 CB
CB
CB
N
 O3
C1
O1
O
1qab 2 P02753 98.33 2e-133 X-RAY
 1999-02-16 ALA E:54 E:57 26.0 0.226 -69.1 129.8 26.0 0.226 0.0 RTL
 3.544
 CB
 C4
ALA F:54 F:57 31.0 0.27 E -74.4 173.2 31.0 0.27 0.0 RTL
 3.424
 CB
 C17
3bsz 2 P02753 100.0 3e-133 X-RAY
 2008-11-11 ALA E:57 E:57 20.0 0.174 E -151.1 102.9 20.0 0.174 0.0 RTL
 3.882
 CB
 C2
ALA F:57 F:57 18.0 0.157 E -153.0 108.6 18.0 0.157 0.0 RTL
HOH
 4.149
6.228
 CB
N
 C2
O
2wqa 2 P02753 99.44 3e-133 X-RAY
 2010-09-01 ALA E:58 E:57 21.0 0.183 -62.4 158.3 21.0 0.183 0.0 OLA
 3.566
 N
 C11
ALA F:58 F:57 15.0 0.13 E -154.1 147.8 15.0 0.13 0.0 OLA
 3.866
 CB
 C10
2wq9 1 P02753 100.0 1e-131 X-RAY
 2010-09-01 ALA A:57 A:57 19.0 0.165 E -145.3 146.9 19.0 0.165 0.0 OLA
HOH
 3.768
3.603
 CB
O
 C10
O
2wr6 1 P02753 99.43 1e-131 X-RAY
 2010-09-15 ALA A:58 A:57 19.0 0.165 E -142.8 128.2 19.0 0.165 0.0 ODT
HOH
 3.808
3.823
 CB
N
 C12
O
1aqb 1 P27485 92.9 7e-131 X-RAY
 1998-01-28 ALA A:57 A:57 23.0 0.2 E -148.3 142.4 23.0 0.2 0.0 RTL
HOH
 4.021
4.428
 CB
O
 C4
O
1hbq 1 P18902 92.35 4e-130 X-RAY
 1994-01-31 ALA A:57 A:57 26.0 0.226 E -149.7 156.7 26.0 0.226 0.0 HOH
 3.800
 N
 O
1erb 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 ALA A:57 A:57 27.0 0.235 E -129.3 151.4 27.0 0.235 0.0 ETR
HOH
 3.593
4.453
 CB
O
 C4
O
1fel 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ALA A:57 A:57 26.0 0.226 E -129.3 146.3 26.0 0.226 0.0 FEN
HOH
 3.687
3.572
 CB
CA
 C5
O
1fem 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ALA A:57 A:57 25.0 0.217 E -154.5 146.4 25.0 0.217 0.0 REA
HOH
 4.774
3.706
 CB
CA
 C4
O
1fen 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 ALA A:57 A:57 28.0 0.243 E -139.0 145.5 28.0 0.243 0.0 AZE
HOH
 4.157
3.905
 CB
CA
 C5
O
1hbp 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 ALA A:57 A:57 28.0 0.243 E -132.2 145.8 28.0 0.243 0.0 RTL
HOH
 3.449
4.481
 CB
O
 C4
O
1kt3 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ALA A:57 A:57 25.0 0.217 E -154.7 143.2 25.0 0.217 0.0 RTL
HOH
 4.355
4.414
 CB
O
 C3
O
1kt4 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ALA A:57 A:57 21.0 0.183 E -150.2 140.4 21.0 0.183 0.0 RTL
HOH
 3.969
3.561
 CB
N
 C3
O
1kt6 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ALA A:57 A:57 20.0 0.174 E -152.0 144.9 20.0 0.174 0.0 RTL
HOH
 4.208
3.903
 CB
N
 C3
O
1kt7 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 ALA A:57 A:57 19.0 0.165 E -149.9 143.2 19.0 0.165 0.0 RTL
HOH
 4.101
3.032
 CB
O
 C3
O
1kt5 1 P18902 93.14 1e-124 X-RAY
 2003-06-03 ALA A:57 A:57 22.0 0.191 E -142.3 134.1 22.0 0.191 0.0 RTL
HOH
 3.965
3.597
 CB
N
 C4
O
1rlb 2 P02753 92.53 2e-123 X-RAY
 1996-04-11 ALA E:57 E:57 25.0 0.217 E -152.7 138.9 25.0 0.217 0.0 REA
 3.359
 CB
 C4
ALA F:57 F:57 26.0 0.226 -98.8 153.2 26.0 0.226 0.0 REA
 3.726
 CB
 C17
1iiu 1 P41263 87.21 3e-116 X-RAY
 2002-01-16 ALA A:56 A:57 22.0 0.191 E -149.4 138.1 22.0 0.191 0.0 RTL
HOH
 3.852
7.569
 CB
N
 C4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02753-f1 1 P02753 100.0 2e-152 ALA A:75 A:75 25.0 0.217 E -137.5 131.8