Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 95360543 . G A CCDS31249.1:NM_006744.3:c.129taC>taT_NP_006735.2:p.43Y>Y Homo sapiens retinol binding protein 4 (RBP4), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4o9s 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 TYR A:57 A:25 69.0 0.3 E -99.4 118.3 69.0 0.3 0.0 2RY
EDO
EDO
EDO
HOH
 9.606
6.931
4.204
6.661
3.989
 C
CE2
CE2
CD2
CE1
 N2
O2
O1
C1
O
TYR B:57 B:25 69.0 0.3 E -106.6 119.1 NA NA NA
3fmz 1 P02753 98.92 2e-139 X-RAY
 2009-01-27 TYR A:54 A:25 68.0 0.296 E -106.2 115.9 68.0 0.296 0.0 2T1
HOH
 9.797
7.739
 C
O
 F3
O
TYR B:54 B:25 73.0 0.317 E -103.9 117.3 NA NA NA
4psq 1 P02753 98.92 2e-139 X-RAY
 2014-07-02 TYR A:54 B:25 68.0 0.296 E -106.6 118.0 68.0 0.296 0.0 EDO
HOH
 8.298
3.777
 CE1
CE1
 O2
O
TYR B:54 A:25 66.0 0.287 E -105.3 120.1 NA NA NA
6qba 1 P02753 100.0 2e-138 X-RAY
 2020-06-03 TYR A:27 A:25 52.0 0.226 E -96.1 128.9 52.0 0.226 0.0 2T1
IMD
IMD
IMD
PEG
ZN
ZN
HOH
 9.562
8.959
2.637
5.569
9.335
8.622
4.600
2.676
 C
HD2
OH
HE1
O
HD2
HE1
HB3
 F1
HN3
HN1
HN3
H42
ZN
ZN
O
1jyd 1 P02753 100.0 8e-138 X-RAY
 2003-07-01 TYR A:26 A:25 61.0 0.265 E -98.5 125.3 61.0 0.265 0.0 GOL
GOL
HOH
 7.939
5.624
4.056
 C
OH
CE1
 O2
O1
O
1brp 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 TYR A:25 A:25 63.0 0.274 E -112.8 136.9 63.0 0.274 0.0 RTL
HOH
 8.814
3.897
 C
CE2
 C17
O
1brq 1 P02753 100.0 8e-138 X-RAY
 1994-01-31 TYR A:25 A:25 64.0 0.278 E -107.3 127.8 64.0 0.278 0.0 HOH
 3.580
 CE2
 O
1rbp 1 P02753 100.0 8e-138 X-RAY
 1991-07-15 TYR A:25 A:25 66.0 0.287 E -104.3 120.2 66.0 0.287 0.0 RTL
HOH
 9.001
2.884
 C
OH
 C17
O
5nty 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:25 A:25 62.0 0.27 E -98.5 126.5 62.0 0.27 0.0 PLM
HOH
 9.318
3.605
 C
CE1
 CE
O
5nu2 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:25 A:25 62.0 0.27 E -96.4 126.1 62.0 0.27 0.0 PLM
HOH
 9.065
3.722
 C
CE1
 CE
O
5nu6 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:25 A:25 65.0 0.283 E -97.1 125.7 65.0 0.283 0.0 PLM
HOH
 9.060
3.784
 C
CE1
 CE
O
5nu7 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:25 A:25 63.0 0.274 E -97.4 126.1 63.0 0.274 0.0 RTL
HOH
 9.105
3.640
 C
CE1
 C17
O
5nu8 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:25 A:25 63.0 0.274 E -95.9 124.7 63.0 0.274 0.0 PLM
HOH
 9.207
3.880
 C
CE1
 CE
O
5nu9 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:25 A:25 65.0 0.283 E -97.4 126.5 65.0 0.283 0.0 PLM
HOH
 9.334
3.917
 C
CE1
 CE
O
5nua 1 P02753 100.0 8e-138 X-RAY
 2018-03-07 TYR A:25 A:25 64.0 0.278 E -96.5 125.0 64.0 0.278 0.0 HOH
 3.744
 CE1
 O
5nub 1 P02753 100.0 8e-138 X-RAY
 2018-03-14 TYR A:25 A:25 62.0 0.27 E -98.3 126.5 62.0 0.27 0.0 DAO
HOH
 9.646
3.773
 N
CE1
 C12
O
1jyj 1 P02753 98.9 8e-136 X-RAY
 2003-07-01 TYR A:26 A:25 63.0 0.274 E -97.9 126.8 63.0 0.274 0.0 GOL
GOL
HOH
 8.719
4.819
2.649
 C
CE2
OH
 O2
O3
O
1qab 2 P02753 98.33 2e-133 X-RAY
 1999-02-16 TYR E:22 E:25 64.0 0.278 B -100.8 121.7 64.0 0.278 0.0 RTL
 9.361
 C
 C17
TYR F:22 F:25 73.0 0.317 E -120.5 152.9 73.0 0.317 0.0 RTL
 9.216
 C
 C17
3bsz 2 P02753 100.0 3e-133 X-RAY
 2008-11-11 TYR E:25 E:25 68.0 0.296 E -112.2 133.9 68.0 0.296 0.0 RTL
 9.183
 C
 C17
TYR F:25 F:25 69.0 0.3 E -116.4 136.7 69.0 0.3 0.0 RTL
HOH
 9.014
9.919
 C
CE1
 C17
O
2wqa 2 P02753 99.44 3e-133 X-RAY
 2010-09-01 TYR E:26 E:25 70.0 0.304 E -92.4 136.1 70.0 0.304 0.0 OLA
HOH
 8.720
3.638
 C
CE2
 C16
O
TYR F:26 F:25 73.0 0.317 E -91.4 137.1 73.0 0.317 0.0 OLA
HOH
 8.462
8.425
 C
OH
 C15
O
2wq9 1 P02753 100.0 1e-131 X-RAY
 2010-09-01 TYR A:25 A:25 62.0 0.27 E -96.7 125.1 62.0 0.27 0.0 OLA
GOL
HOH
 8.530
6.101
2.561
 C
OH
OH
 C15
O2
O
2wr6 1 P02753 99.43 1e-131 X-RAY
 2010-09-15 TYR A:26 A:25 60.0 0.261 E -101.9 125.3 60.0 0.261 0.0 ODT
HOH
 8.847
2.741
 C
OH
 C15
O
1aqb 1 P27485 92.9 7e-131 X-RAY
 1998-01-28 TYR A:25 A:25 67.0 0.291 E -99.4 125.1 67.0 0.291 0.0 CD
RTL
HOH
 8.879
9.166
3.281
 CE2
C
OH
 CD
C17
O
1hbq 1 P18902 92.35 4e-130 X-RAY
 1994-01-31 TYR A:25 A:25 70.0 0.304 E -102.9 130.5 70.0 0.304 0.0 HOH
 2.674
 OH
 O
1erb 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 TYR A:25 A:25 68.0 0.296 E -105.2 130.3 68.0 0.296 0.0 ETR
HOH
 8.843
2.733
 C
OH
 C17
O
1fel 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 TYR A:25 A:25 67.0 0.291 E -98.9 135.0 67.0 0.291 0.0 FEN
HOH
 9.307
2.774
 C
CE2
 C17
O
1fem 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 TYR A:25 A:25 64.0 0.278 E -113.5 130.0 64.0 0.278 0.0 REA
HOH
 9.217
2.294
 C
OH
 C17
O
1fen 1 P18902 92.35 6e-130 X-RAY
 1994-11-01 TYR A:25 A:25 65.0 0.283 E -93.7 122.3 65.0 0.283 0.0 AZE
HOH
 9.009
2.792
 C
OH
 C17
O
1hbp 1 P18902 92.35 6e-130 X-RAY
 1994-01-31 TYR A:25 A:25 69.0 0.3 E -102.6 123.9 69.0 0.3 0.0 RTL
HOH
 9.053
2.650
 C
OH
 C17
O
1kt3 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 TYR A:25 A:25 75.0 0.326 E -98.0 128.4 75.0 0.326 0.0 RTL
HOH
 9.270
4.467
 C
CE1
 C17
O
1kt4 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 TYR A:25 A:25 69.0 0.3 E -89.5 130.6 69.0 0.3 0.0 RTL
HOH
 8.907
3.230
 C
OH
 C17
O
1kt6 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 TYR A:25 A:25 70.0 0.304 E -93.4 126.4 70.0 0.304 0.0 RTL
HOH
 9.135
2.456
 C
OH
 C17
O
1kt7 1 P18902 92.35 6e-130 X-RAY
 2003-06-03 TYR A:25 A:25 69.0 0.3 E -94.3 127.6 69.0 0.3 0.0 RTL
HOH
 8.973
2.539
 C
OH
 C17
O
1kt5 1 P18902 93.14 1e-124 X-RAY
 2003-06-03 TYR A:25 A:25 68.0 0.296 E -94.3 125.6 68.0 0.296 0.0 RTL
HOH
 8.976
3.840
 C
CE1
 C17
O
1rlb 2 P02753 92.53 2e-123 X-RAY
 1996-04-11 TYR E:25 E:25 66.0 0.287 E -84.1 130.9 66.0 0.287 0.0 REA
 8.748
 C
 C17
TYR F:25 F:25 75.0 0.326 E -83.4 121.7 75.0 0.326 0.0 REA
 9.846
 C
 C2
1iiu 1 P41263 87.21 3e-116 X-RAY
 2002-01-16 TYR A:24 A:25 63.0 0.274 E -108.2 124.1 63.0 0.274 0.0 RTL
HOH
 9.155
3.232
 C
CE1
 C17
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02753-f1 1 P02753 100.0 2e-152 TYR A:43 A:43 64.0 0.278 E -104.6 121.4