Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 101157378 . C A CCDS7479.1:NM_002079.2:c.1168Gtg>Ttg_NP_002070.1:p.390V>L Homo sapiens glutamic-oxaloacetic transaminase 1 (GOT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3wzf 1 P17174 100.0 0.0 X-RAY
 2015-10-07 VAL A:389 A:389 3.0 0.019 G -55.4 -34.5 3.0 0.019 0.0
6dnd 1 P17174 100.0 0.0 X-RAY
 2018-11-14 VAL A:388 A:390 2.0 0.013 G -66.1 -29.5 2.0 0.013 0.0 HOH
 5.871
 C
 O
VAL B:388 B:390 2.0 0.013 G -65.4 -30.0 NA NA NA
6lig 1 P17174 100.0 0.0 X-RAY
 2020-12-16 VAL A:388 A:390 2.0 0.013 G -63.2 -28.9 2.0 0.013 0.0 HOH
 5.960
 O
 O
VAL B:388 B:390 3.0 0.019 G -62.6 -30.7 3.0 0.019 0.0 HOH
 7.044
 CG2
 O
6dnb 1 P17174 99.27 0.0 X-RAY
 2018-11-14 VAL A:388 A:390 2.0 0.013 G -69.6 -27.1 2.0 0.013 0.0 HOH
 5.869
 N
 O
6dna 1 P17174 99.75 0.0 X-RAY
 2018-11-14 VAL A:385 A:390 9.0 0.058 G -57.3 -39.5 9.0 0.058 0.0
VAL B:385 B:390 3.0 0.019 G -60.2 -39.0 NA NA NA
VAL C:385 C:390 0.0 0.0 G -64.8 -36.1 NA NA NA
VAL D:385 D:390 4.0 0.026 G -59.8 -37.9 NA NA NA
VAL E:385 E:390 1.0 0.006 G -64.6 -35.6 NA NA NA
VAL F:385 F:390 3.0 0.019 G -62.8 -34.3 NA NA NA
3ii0 1 P17174 100.0 0.0 X-RAY
 2009-08-11 VAL A:378 A:390 1.0 0.006 G -62.5 -29.3 1.0 0.006 0.0 TAR
HOH
 9.863
6.722
 N
N
 O4
O
VAL B:378 B:390 1.0 0.006 G -58.0 -31.8 NA NA NA
VAL C:378 C:390 1.0 0.006 G -61.5 -32.9 NA NA NA
VAL D:378 D:390 0.0 0.0 G -64.6 -28.4 NA NA NA
5toq 1 P00503 92.01 0.0 X-RAY
 2017-03-01 MET A:391 A:389 0.0 0.0 G -57.3 -26.2 0.0 0.0 0.0 HOH
 6.271
 CG
 O
MET B:391 B:389 0.0 0.0 G -63.0 -23.6 0.0 0.0 0.0 HOH
 6.378
 CG
 O
5vk7 1 P00503 92.01 0.0 X-RAY
 2017-11-01 MET A:391 A:389 0.0 0.0 G -58.7 -22.6 0.0 0.0 0.0 HOH
 6.444
 CG
 O
MET B:391 B:389 0.0 0.0 G -55.8 -26.0 0.0 0.0 0.0 HOH
 6.500
 CG
 O
1ajr 1 P00503 91.99 0.0 X-RAY
 1997-08-20 MET A:389 A:389 0.0 0.0 G -63.1 -21.0 0.0 0.0 0.0 HOH
 6.765
 CG
 O
MET B:389 B:389 0.0 0.0 G -57.0 -26.1 0.0 0.0 0.0 HOH
 6.511
 CG
 O
1ajs 1 P00503 91.99 0.0 X-RAY
 1997-08-20 MET A:389 A:389 0.0 0.0 G -62.7 -23.8 0.0 0.0 0.0 HOH
 6.846
 N
 O
1ajs 2 P00503 91.99 0.0 X-RAY
 1997-08-20 MET B:389 B:389 0.0 0.0 G -58.4 -22.2 0.0 0.0 0.0 HOH
 6.492
 CG
 O
5vjz 1 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 MET A:389 A:389 0.0 0.0 G -47.6 -35.3 0.0 0.0 0.0 PLA
 9.805
 D
 HB22
5vjz 2 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 MET B:389 B:389 0.0 0.0 G -54.0 -24.1 NA NA NA
5tor 1 P00503 91.77 0.0 X-RAY
 2017-03-01 MET A:391 A:389 0.0 0.0 G -61.3 -25.0 0.0 0.0 0.0 HOH
 6.220
 N
 O
MET B:391 B:389 0.0 0.0 G -61.5 -23.1 0.0 0.0 0.0 HOH
 6.320
 N
 O
5ton 1 P00503 91.77 0.0 X-RAY
 2017-03-01 MET A:391 A:389 0.0 0.0 G -59.3 -24.8 0.0 0.0 0.0 HOH
 6.187
 O
 O
MET B:391 B:389 0.0 0.0 G -61.4 -22.2 0.0 0.0 0.0 HOH
 6.312
 CG
 O
5tot 1 P00503 91.53 0.0 X-RAY
 2017-03-01 MET A:391 A:389 0.0 0.0 G -60.6 -23.3 0.0 0.0 0.0 HOH
 6.489
 CG
 O
MET B:391 B:389 0.0 0.0 G -62.6 -24.1 0.0 0.0 0.0 HOH
 6.458
 CG
 O
2cst 1 P00504 80.44 0.0 X-RAY
 1994-11-30 MET A:388 A:389 0.0 0.0 G -62.8 -21.8 0.0 0.0 0.0 MAE
HOH
 9.900
6.757
 N
N
 O1
O
MET B:388 B:389 0.0 0.0 G -50.4 -30.0 0.0 0.0 0.0 HOH
 6.512
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p17174-f1 1 P17174 100.0 0.0 VAL A:390 A:390 2.0 0.013 G -60.3 -31.7