Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 101157386 . C A CCDS7479.1:NM_002079.2:c.1160cGa>cTa_NP_002070.1:p.387R>L Homo sapiens glutamic-oxaloacetic transaminase 1 (GOT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3wzf 1 P17174 100.0 0.0 X-RAY
 2015-10-07 ARG A:386 A:386 6.0 0.027 E -86.3 128.6 6.0 0.027 0.0
6dnd 1 P17174 100.0 0.0 X-RAY
 2018-11-14 ARG A:385 A:387 13.0 0.058 E -75.0 134.2 13.0 0.058 0.0 PLP
HOH
 7.166
8.782
 NH1
NH2
 O4A
O
ARG B:385 B:387 20.0 0.089 E -73.1 133.8 NA NA NA
6lig 1 P17174 100.0 0.0 X-RAY
 2020-12-16 ARG A:385 A:387 28.0 0.124 E -79.3 133.2 28.0 0.124 0.0 EE6
HOH
 4.299
4.071
 NH1
CB
 C17
O
ARG B:385 B:387 9.0 0.04 E -93.6 138.1 9.0 0.04 0.0 PLP
HOH
 8.047
6.719
 NH1
N
 O3
O
6dnb 1 P17174 99.27 0.0 X-RAY
 2018-11-14 ARG A:385 A:387 27.0 0.12 E -66.7 128.8 27.0 0.12 0.0 HOH
 2.628
 O
 O
6dna 1 P17174 99.75 0.0 X-RAY
 2018-11-14 ARG A:382 A:387 9.0 0.04 E -81.8 129.6 9.0 0.04 0.0 PLP
 5.252
 NH1
 O4A
ARG B:382 B:387 8.0 0.036 E -81.9 130.9 NA NA NA
ARG C:382 C:387 13.0 0.058 E -83.4 128.4 NA NA NA
ARG D:382 D:387 36.0 0.16 E -86.5 128.7 NA NA NA
ARG E:382 E:387 16.0 0.071 E -79.7 127.9 NA NA NA
ARG F:382 F:387 8.0 0.036 E -84.0 130.2 NA NA NA
3ii0 1 P17174 100.0 0.0 X-RAY
 2009-08-11 ARG A:375 A:387 10.0 0.044 E -68.7 130.3 10.0 0.044 0.0 PLP
TAR
HOH
 6.148
2.760
2.706
 NH1
NH1
NE
 O3
O41
O
ARG B:375 B:387 12.0 0.053 E -73.0 128.6 NA NA NA
ARG C:375 C:387 11.0 0.049 E -75.7 132.5 NA NA NA
ARG D:375 D:387 11.0 0.049 E -70.9 134.8 NA NA NA
5toq 1 P00503 92.01 0.0 X-RAY
 2017-03-01 ARG A:388 A:386 12.0 0.053 E -69.4 132.9 12.0 0.053 0.0 HOH
 2.716
 NH1
 O
ARG B:388 B:386 41.0 0.182 E -75.2 128.8 41.0 0.182 0.0 HOH
 2.478
 NE
 O
5vk7 1 P00503 92.01 0.0 X-RAY
 2017-11-01 ARG A:388 A:386 14.0 0.062 E -66.3 128.2 14.0 0.062 0.0 HOH
 2.662
 NH1
 O
ARG B:388 B:386 32.0 0.142 E -75.2 128.1 32.0 0.142 0.0 HOH
 3.879
 NH1
 O
1ajr 1 P00503 91.99 0.0 X-RAY
 1997-08-20 ARG A:386 A:386 13.0 0.058 E -75.5 135.6 13.0 0.058 0.0 HOH
 3.117
 NH1
 O
ARG B:386 B:386 12.0 0.053 E -74.7 130.1 12.0 0.053 0.0 HOH
 2.592
 O
 O
1ajs 1 P00503 91.99 0.0 X-RAY
 1997-08-20 ARG A:386 A:386 4.0 0.018 E -78.0 131.0 4.0 0.018 0.0 PLA
HOH
 2.905
2.719
 NH2
O
 O
O
1ajs 2 P00503 91.99 0.0 X-RAY
 1997-08-20 ARG B:386 B:386 14.0 0.062 E -72.6 131.9 14.0 0.062 0.0 HOH
 2.691
 O
 O
5vjz 1 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 ARG A:386 A:386 0.0 0.0 E -92.1 138.1 0.0 0.0 0.0
5vjz 2 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 ARG B:386 B:386 18.0 0.08 E -79.8 128.1 NA NA NA
5tor 1 P00503 91.77 0.0 X-RAY
 2017-03-01 ARG A:388 A:386 29.0 0.129 E -69.0 133.6 29.0 0.129 0.0 HOH
 2.655
 NH2
 O
ARG B:388 B:386 25.0 0.111 E -69.4 134.5 25.0 0.111 0.0 HOH
 2.514
 O
 O
5ton 1 P00503 91.77 0.0 X-RAY
 2017-03-01 ARG A:388 A:386 9.0 0.04 E -67.7 131.2 9.0 0.04 0.0 HOH
 2.706
 NH1
 O
ARG B:388 B:386 20.0 0.089 E -72.8 132.1 20.0 0.089 0.0 HOH
 3.477
 NH1
 O
5tot 1 P00503 91.53 0.0 X-RAY
 2017-03-01 ARG A:388 A:386 11.0 0.049 E -68.8 132.0 11.0 0.049 0.0 HOH
 2.608
 NH1
 O
ARG B:388 B:386 18.0 0.08 E -71.8 136.0 18.0 0.08 0.0 HOH
 3.289
 NH1
 O
2cst 1 P00504 80.44 0.0 X-RAY
 1994-11-30 ARG A:385 A:386 12.0 0.053 E -71.1 135.1 12.0 0.053 0.0 PLP
MAE
HOH
 6.312
2.841
2.674
 NH1
NH2
O
 O3
O1
O
ARG B:385 B:386 12.0 0.053 E -73.0 120.0 12.0 0.053 0.0 PLP
MAE
HOH
 6.194
2.797
2.865
 NH1
NH2
NE
 O3
O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p17174-f1 1 P17174 100.0 0.0 ARG A:387 A:387 22.0 0.098 E -70.1 125.5