Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 101162382 . G A CCDS7479.1:NM_002079.2:c.1057Cac>Tac_NP_002070.1:p.353H>Y Homo sapiens glutamic-oxaloacetic transaminase 1 (GOT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3wzf 1 P17174 100.0 0.0 X-RAY
 2015-10-07 HIS A:352 A:352 8.0 0.041 H -52.2 -35.0 8.0 0.041 0.0
6dnd 1 P17174 100.0 0.0 X-RAY
 2018-11-14 HIS A:351 A:353 3.0 0.015 H -57.1 -34.5 3.0 0.015 0.0 HOH
 5.973
 N
 O
HIS B:351 B:353 3.0 0.015 H -54.6 -36.2 NA NA NA
6lig 1 P17174 100.0 0.0 X-RAY
 2020-12-16 HIS A:351 A:353 2.0 0.01 H -63.6 -25.5 2.0 0.01 0.0 HOH
 2.707
 ND1
 O
HIS B:351 B:353 3.0 0.015 H -66.5 -23.2 3.0 0.015 0.0 HOH
 6.318
 ND1
 O
6dnb 1 P17174 99.27 0.0 X-RAY
 2018-11-14 HIS A:351 A:353 5.0 0.026 H -62.9 -28.6 5.0 0.026 0.0 HOH
 2.816
 CD2
 O
6dna 1 P17174 99.75 0.0 X-RAY
 2018-11-14 HIS A:348 A:353 11.0 0.056 T -64.2 -17.0 11.0 0.056 0.0
HIS B:348 B:353 7.0 0.036 G -61.6 -16.4 NA NA NA
HIS C:348 C:353 3.0 0.015 G -64.1 -15.0 NA NA NA
HIS D:348 D:353 3.0 0.015 S -75.4 -24.0 NA NA NA
HIS E:348 E:353 3.0 0.015 T -82.0 -19.4 NA NA NA
HIS F:348 F:353 6.0 0.031 G -61.9 -15.5 NA NA NA
3ii0 1 P17174 100.0 0.0 X-RAY
 2009-08-11 HIS A:341 A:353 4.0 0.021 H -61.7 -26.3 4.0 0.021 0.0 HOH
 2.849
 ND1
 O
HIS B:341 B:353 4.0 0.021 H -62.9 -27.8 NA NA NA
HIS C:341 C:353 7.0 0.036 H -64.1 -25.1 NA NA NA
HIS D:341 D:353 5.0 0.026 H -62.2 -27.6 NA NA NA
5toq 1 P00503 92.01 0.0 X-RAY
 2017-03-01 HIS A:354 A:352 3.0 0.015 H -58.2 -28.2 3.0 0.015 0.0 HOH
 2.822
 ND1
 O
HIS B:354 B:352 6.0 0.031 H -61.4 -29.0 6.0 0.031 0.0 HOH
 2.760
 ND1
 O
5vk7 1 P00503 92.01 0.0 X-RAY
 2017-11-01 HIS A:354 A:352 9.0 0.046 H -61.5 -24.6 9.0 0.046 0.0 HOH
 2.861
 ND1
 O
HIS B:354 B:352 10.0 0.051 H -73.1 -32.6 10.0 0.051 0.0 HOH
 6.783
 O
 O
1ajr 1 P00503 91.99 0.0 X-RAY
 1997-08-20 HIS A:352 A:352 5.0 0.026 H -60.3 -32.7 5.0 0.026 0.0 HOH
 6.616
 O
 O
HIS B:352 B:352 5.0 0.026 H -61.4 -28.5 5.0 0.026 0.0 HOH
 2.833
 ND1
 O
1ajs 1 P00503 91.99 0.0 X-RAY
 1997-08-20 HIS A:352 A:352 3.0 0.015 H -61.1 -29.5 3.0 0.015 0.0 HOH
 3.198
 CB
 O
1ajs 2 P00503 91.99 0.0 X-RAY
 1997-08-20 HIS B:352 B:352 4.0 0.021 H -59.0 -29.1 4.0 0.021 0.0 HOH
 2.965
 ND1
 O
5vjz 1 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 HIS A:352 A:352 2.0 0.01 H -52.0 -28.9 2.0 0.01 0.0
5vjz 2 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 HIS B:352 B:352 2.0 0.01 H -63.9 -22.7 NA NA NA
5tor 1 P00503 91.77 0.0 X-RAY
 2017-03-01 HIS A:354 A:352 3.0 0.015 H -59.8 -27.8 3.0 0.015 0.0 HOH
 2.808
 ND1
 O
HIS B:354 B:352 5.0 0.026 H -61.2 -27.0 5.0 0.026 0.0 HOH
 2.851
 ND1
 O
5ton 1 P00503 91.77 0.0 X-RAY
 2017-03-01 HIS A:354 A:352 3.0 0.015 H -59.5 -27.0 3.0 0.015 0.0 HOH
 2.803
 ND1
 O
HIS B:354 B:352 6.0 0.031 H -64.4 -27.3 6.0 0.031 0.0 HOH
 2.883
 ND1
 O
5tot 1 P00503 91.53 0.0 X-RAY
 2017-03-01 HIS A:354 A:352 5.0 0.026 H -60.3 -26.2 5.0 0.026 0.0 HOH
 2.832
 ND1
 O
HIS B:354 B:352 8.0 0.041 H -70.5 -24.3 8.0 0.041 0.0 HOH
 2.508
 ND1
 O
2cst 1 P00504 80.44 0.0 X-RAY
 1994-11-30 HIS A:351 A:352 1.0 0.005 H -60.5 -24.0 1.0 0.005 0.0 HOH
 2.844
 ND1
 O
HIS B:351 B:352 9.0 0.046 H -80.4 -35.8 9.0 0.046 0.0 HOH
 3.440
 CE1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p17174-f1 1 P17174 100.0 0.0 HIS A:353 A:353 4.0 0.021 H -57.3 -27.6