Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 101163628 . G A CCDS7479.1:NM_002079.2:c.646Cgg>Tgg_NP_002070.1:p.216R>W Homo sapiens glutamic-oxaloacetic transaminase 1 (GOT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3wzf 1 P17174 100.0 0.0 X-RAY
 2015-10-07 ARG A:215 A:215 70.0 0.311 T -161.6 73.7 70.0 0.311 0.0
6dnd 1 P17174 100.0 0.0 X-RAY
 2018-11-14 ARG A:214 A:216 68.0 0.302 T -102.7 21.2 68.0 0.302 0.0
ARG B:214 B:216 62.0 0.276 T -101.4 14.5 NA NA NA
6lig 1 P17174 100.0 0.0 X-RAY
 2020-12-16 ARG A:214 A:216 54.0 0.24 T -121.9 14.2 54.0 0.24 0.0 HOH
 3.926
 NH1
 O
ARG B:214 B:216 50.0 0.222 T -110.1 1.5 50.0 0.222 0.0 HOH
 4.649
 NH1
 O
6dnb 1 P17174 99.27 0.0 X-RAY
 2018-11-14 ARG A:214 A:216 62.0 0.276 H -105.2 7.6 62.0 0.276 0.0 GOL
HOH
 5.458
5.383
 C
C
 O3
O
6dna 1 P17174 99.75 0.0 X-RAY
 2018-11-14 ARG A:211 A:216 73.0 0.324 T -105.4 12.1 73.0 0.324 0.0
ARG B:211 B:216 79.0 0.351 T -106.3 12.4 NA NA NA
ARG C:211 C:216 77.0 0.342 T -105.9 13.7 NA NA NA
ARG D:211 D:216 70.0 0.311 T -106.1 12.4 NA NA NA
ARG E:211 E:216 73.0 0.324 T -104.5 10.1 NA NA NA
ARG F:211 F:216 75.0 0.333 T -105.9 12.6 NA NA NA
3ii0 1 P17174 100.0 0.0 X-RAY
 2009-08-11 ARG A:204 A:216 72.0 0.32 H -97.4 8.7 72.0 0.32 0.0 HOH
 3.672
 NH2
 O
ARG B:204 B:216 58.0 0.258 H -101.6 12.9 NA NA NA
ARG C:204 C:216 57.0 0.253 H -105.6 16.1 NA NA NA
ARG D:204 D:216 49.0 0.218 T -109.7 9.8 NA NA NA
5toq 1 P00503 92.01 0.0 X-RAY
 2017-03-01 ARG A:217 A:215 75.0 0.333 H -102.1 7.3 75.0 0.333 0.0 HOH
 3.126
 NH2
 O
ARG B:217 B:215 59.0 0.262 T -99.7 11.2 59.0 0.262 0.0 HOH
 2.920
 NH2
 O
5vk7 1 P00503 92.01 0.0 X-RAY
 2017-11-01 ARG A:217 A:215 56.0 0.249 H -106.4 8.8 56.0 0.249 0.0 HOH
 5.708
 N
 O
ARG B:217 B:215 52.0 0.231 T -104.4 15.5 52.0 0.231 0.0 HOH
 4.151
 NH2
 O
1ajr 1 P00503 91.99 0.0 X-RAY
 1997-08-20 ARG A:215 A:215 57.0 0.253 H -93.7 7.2 57.0 0.253 0.0 HOH
 3.987
 NH2
 O
ARG B:215 B:215 58.0 0.258 H -98.4 6.1 58.0 0.258 0.0 HOH
 3.585
 NH2
 O
1ajs 1 P00503 91.99 0.0 X-RAY
 1997-08-20 ARG A:215 A:215 56.0 0.249 H -96.3 12.5 56.0 0.249 0.0 HOH
 3.907
 CA
 O
1ajs 2 P00503 91.99 0.0 X-RAY
 1997-08-20 ARG B:215 B:215 55.0 0.244 H -95.6 6.6 55.0 0.244 0.0 HOH
 3.966
 NH1
 O
5vjz 1 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 ARG A:215 A:215 63.0 0.28 T -97.3 15.8 63.0 0.28 0.0
5vjz 2 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 ARG B:215 B:215 63.0 0.28 T -95.0 14.1 NA NA NA
5tor 1 P00503 91.77 0.0 X-RAY
 2017-03-01 ARG A:217 A:215 73.0 0.324 H -101.4 7.4 73.0 0.324 0.0 HOH
 2.806
 NH1
 O
ARG B:217 B:215 58.0 0.258 T -100.0 9.7 58.0 0.258 0.0 HOH
 3.298
 NH2
 O
5ton 1 P00503 91.77 0.0 X-RAY
 2017-03-01 ARG A:217 A:215 75.0 0.333 T -101.1 7.7 75.0 0.333 0.0 HOH
 3.196
 NH2
 O
ARG B:217 B:215 58.0 0.258 T -101.1 11.1 58.0 0.258 0.0 HOH
 3.197
 NH1
 O
5tot 1 P00503 91.53 0.0 X-RAY
 2017-03-01 ARG A:217 A:215 74.0 0.329 H -101.0 7.9 74.0 0.329 0.0 HOH
 3.335
 NH2
 O
ARG B:217 B:215 57.0 0.253 T -99.6 10.1 57.0 0.253 0.0 HOH
 2.926
 NH2
 O
2cst 1 P00504 80.44 0.0 X-RAY
 1994-11-30 ARG A:214 A:215 61.0 0.271 H -97.7 8.8 61.0 0.271 0.0 HOH
 4.520
 NH2
 O
ARG B:214 B:215 54.0 0.24 H -93.0 7.6 54.0 0.24 0.0 HOH
 2.575
 NH1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p17174-f1 1 P17174 100.0 0.0 ARG A:216 A:216 52.0 0.231 T -95.7 4.8