Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 101165533 . G A CCDS7479.1:NM_002079.2:c.622Cag>Tag_NP_002070.1:p.208Q>* Homo sapiens glutamic-oxaloacetic transaminase 1 (GOT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3wzf 1 P17174 100.0 0.0 X-RAY
 2015-10-07 GLN A:207 A:207 63.0 0.35 H -58.0 -64.2 63.0 0.35 0.0
6dnd 1 P17174 100.0 0.0 X-RAY
 2018-11-14 GLN A:206 A:208 80.0 0.444 H -72.0 -39.8 80.0 0.444 0.0
GLN B:206 B:208 83.0 0.461 H -71.8 -39.3 NA NA NA
6lig 1 P17174 100.0 0.0 X-RAY
 2020-12-16 GLN A:206 A:208 86.0 0.478 H -80.6 -33.4 86.0 0.478 0.0 HOH
 3.472
 NE2
 O
GLN B:206 B:208 75.0 0.417 H -71.3 -40.8 75.0 0.417 0.0 HOH
 3.613
 NE2
 O
6dnb 1 P17174 99.27 0.0 X-RAY
 2018-11-14 GLN A:206 A:208 92.0 0.511 H -72.4 -43.2 92.0 0.511 0.0 HOH
 4.868
 N
 O
6dna 1 P17174 99.75 0.0 X-RAY
 2018-11-14 GLN A:203 A:208 78.0 0.433 H -74.9 -43.9 78.0 0.433 0.0
GLN B:203 B:208 81.0 0.45 H -74.7 -43.8 NA NA NA
GLN C:203 C:208 75.0 0.417 H -76.2 -42.1 NA NA NA
GLN D:203 D:208 87.0 0.483 H -76.3 -41.8 NA NA NA
GLN E:203 E:208 90.0 0.5 H -75.3 -41.8 NA NA NA
GLN F:203 F:208 80.0 0.444 H -75.8 -42.5 NA NA NA
3ii0 1 P17174 100.0 0.0 X-RAY
 2009-08-11 GLN A:196 A:208 84.0 0.467 H -68.5 -36.8 84.0 0.467 0.0 HOH
 3.044
 O
 O
GLN B:196 B:208 81.0 0.45 H -72.2 -36.9 NA NA NA
GLN C:196 C:208 84.0 0.467 H -67.5 -39.0 NA NA NA
GLN D:196 D:208 88.0 0.489 H -65.9 -43.3 NA NA NA
5toq 1 P00503 92.01 0.0 X-RAY
 2017-03-01 GLN A:209 A:207 86.0 0.478 H -68.6 -41.1 86.0 0.478 0.0 HOH
 2.509
 NE2
 O
GLN B:209 B:207 70.0 0.389 H -68.0 -41.9 70.0 0.389 0.0 HOH
 2.378
 OE1
 O
5vk7 1 P00503 92.01 0.0 X-RAY
 2017-11-01 GLN A:209 A:207 98.0 0.544 H -64.7 -40.8 98.0 0.544 0.0 HOH
 4.839
 N
 O
GLN B:209 B:207 67.0 0.372 H -70.7 -40.4 67.0 0.372 0.0 HOH
 4.856
 N
 O
1ajr 1 P00503 91.99 0.0 X-RAY
 1997-08-20 GLN A:207 A:207 66.0 0.367 H -71.1 -41.0 66.0 0.367 0.0 HOH
 4.764
 N
 O
GLN B:207 B:207 90.0 0.5 H -66.1 -43.4 90.0 0.5 0.0 HOH
 2.876
 O
 O
1ajs 1 P00503 91.99 0.0 X-RAY
 1997-08-20 GLN A:207 A:207 68.0 0.378 H -70.6 -41.7 68.0 0.378 0.0 HOH
 3.471
 CG
 O
1ajs 2 P00503 91.99 0.0 X-RAY
 1997-08-20 GLN B:207 B:207 83.0 0.461 H -70.7 -39.6 83.0 0.461 0.0 HOH
 3.114
 O
 O
5vjz 1 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 GLN A:207 A:207 69.0 0.383 H -68.2 -41.2 69.0 0.383 0.0
5vjz 2 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 GLN B:207 B:207 80.0 0.444 H -72.5 -39.5 NA NA NA
5tor 1 P00503 91.77 0.0 X-RAY
 2017-03-01 GLN A:209 A:207 85.0 0.472 H -68.1 -41.8 85.0 0.472 0.0 HOH
 2.490
 OE1
 O
GLN B:209 B:207 67.0 0.372 H -68.5 -42.3 67.0 0.372 0.0 HOH
 2.575
 NE2
 O
5ton 1 P00503 91.77 0.0 X-RAY
 2017-03-01 GLN A:209 A:207 86.0 0.478 H -68.3 -40.2 86.0 0.478 0.0 HOH
 2.628
 NE2
 O
GLN B:209 B:207 69.0 0.383 H -66.4 -42.3 69.0 0.383 0.0 HOH
 2.760
 OE1
 O
5tot 1 P00503 91.53 0.0 X-RAY
 2017-03-01 GLN A:209 A:207 84.0 0.467 H -68.7 -40.4 84.0 0.467 0.0 HOH
 2.669
 NE2
 O
GLN B:209 B:207 68.0 0.378 H -67.1 -42.9 68.0 0.378 0.0 HOH
 2.270
 OE1
 O
2cst 1 P00504 80.44 0.0 X-RAY
 1994-11-30 GLN A:206 A:207 95.0 0.528 H -68.1 -41.2 95.0 0.528 0.0 HOH
 2.391
 NE2
 O
GLN B:206 B:207 96.0 0.533 H -68.4 -42.0 96.0 0.533 0.0 HOH
 2.335
 NE2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p17174-f1 1 P17174 100.0 0.0 GLN A:208 A:208 88.0 0.489 H -65.1 -45.7