Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 101165905 . T A CCDS7479.1:NM_002079.2:c.526Aat>Tat_NP_002070.1:p.176N>Y Homo sapiens glutamic-oxaloacetic transaminase 1 (GOT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3wzf 1 P17174 100.0 0.0 X-RAY
 2015-10-07 ASN A:175 A:175 99.0 0.619 T -69.2 -44.6 99.0 0.619 0.0
6dnd 1 P17174 100.0 0.0 X-RAY
 2018-11-14 ASN A:174 A:176 72.0 0.45 H -56.3 -55.3 72.0 0.45 0.0
ASN B:174 B:176 74.0 0.463 H -56.4 -52.7 NA NA NA
6lig 1 P17174 100.0 0.0 X-RAY
 2020-12-16 ASN A:174 A:176 77.0 0.481 H -67.7 -41.4 77.0 0.481 0.0 HOH
 7.056
 CB
 O
ASN B:174 B:176 77.0 0.481 H -75.6 -32.4 77.0 0.481 0.0 HOH
 4.729
 O
 O
6dnb 1 P17174 99.27 0.0 X-RAY
 2018-11-14 ASN A:174 A:176 59.0 0.369 H -60.9 -44.4 59.0 0.369 0.0 HOH
 2.723
 ND2
 O
6dna 1 P17174 99.75 0.0 X-RAY
 2018-11-14 ASN A:171 A:176 76.0 0.475 H -51.9 -42.6 76.0 0.475 0.0
ASN B:171 B:176 63.0 0.394 H -51.9 -42.0 NA NA NA
ASN C:171 C:176 75.0 0.469 H -51.4 -42.5 NA NA NA
ASN D:171 D:176 74.0 0.463 H -51.5 -41.5 NA NA NA
ASN E:171 E:176 73.0 0.456 H -52.3 -41.5 NA NA NA
ASN F:171 F:176 68.0 0.425 H -53.1 -41.8 NA NA NA
3ii0 1 P17174 100.0 0.0 X-RAY
 2009-08-11 ASN A:164 A:176 75.0 0.469 H -60.4 -42.6 75.0 0.469 0.0 HOH
 5.145
 O
 O
ASN B:164 B:176 84.0 0.525 H -62.5 -42.4 NA NA NA
ASN C:164 C:176 76.0 0.475 H -65.7 -40.6 NA NA NA
ASN D:164 D:176 79.0 0.494 H -69.6 -40.1 NA NA NA
5toq 1 P00503 92.01 0.0 X-RAY
 2017-03-01 SER A:177 A:175 50.0 0.435 H -65.0 -41.5 50.0 0.435 0.0 HOH
 2.891
 OG
 O
SER B:177 B:175 49.0 0.426 H -62.9 -39.8 49.0 0.426 0.0 HOH
 3.024
 OG
 O
5vk7 1 P00503 92.01 0.0 X-RAY
 2017-11-01 SER A:177 A:175 43.0 0.374 H -64.2 -42.8 43.0 0.374 0.0 HOH
 4.835
 O
 O
SER B:177 B:175 45.0 0.391 H -61.3 -43.6 45.0 0.391 0.0 HOH
 4.976
 O
 O
1ajr 1 P00503 91.99 0.0 X-RAY
 1997-08-20 SER A:175 A:175 43.0 0.374 H -64.0 -38.4 43.0 0.374 0.0 HOH
 3.325
 OG
 O
SER B:175 B:175 45.0 0.391 H -64.5 -38.1 45.0 0.391 0.0 HOH
 3.018
 OG
 O
1ajs 1 P00503 91.99 0.0 X-RAY
 1997-08-20 SER A:175 A:175 47.0 0.409 H -62.2 -39.0 47.0 0.409 0.0 HOH
 4.895
 O
 O
1ajs 2 P00503 91.99 0.0 X-RAY
 1997-08-20 SER B:175 B:175 43.0 0.374 H -63.9 -39.6 43.0 0.374 0.0 HOH
 4.885
 O
 O
5vjz 1 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 SER A:175 A:175 41.0 0.357 H -60.2 -44.6 41.0 0.357 0.0
5vjz 2 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 SER B:175 B:175 39.0 0.339 H -59.0 -46.1 NA NA NA
5tor 1 P00503 91.77 0.0 X-RAY
 2017-03-01 SER A:177 A:175 52.0 0.452 H -63.6 -42.6 52.0 0.452 0.0 HOH
 3.071
 OG
 O
SER B:177 B:175 51.0 0.443 H -65.0 -38.6 51.0 0.443 0.0 HOH
 2.992
 OG
 O
5ton 1 P00503 91.77 0.0 X-RAY
 2017-03-01 SER A:177 A:175 50.0 0.435 H -62.3 -42.6 50.0 0.435 0.0 HOH
 2.968
 OG
 O
SER B:177 B:175 49.0 0.426 H -64.4 -37.9 49.0 0.426 0.0 HOH
 2.962
 OG
 O
5tot 1 P00503 91.53 0.0 X-RAY
 2017-03-01 SER A:177 A:175 50.0 0.435 H -63.0 -43.1 50.0 0.435 0.0 HOH
 2.724
 OG
 O
SER B:177 B:175 50.0 0.435 H -64.4 -38.9 50.0 0.435 0.0 HOH
 2.807
 OG
 O
2cst 1 P00504 80.44 0.0 X-RAY
 1994-11-30 ASP A:174 A:175 90.0 0.6 H -60.1 -44.0 90.0 0.6 0.0 HOH
 2.329
 OD1
 O
ASP B:174 B:175 50.0 0.333 H -59.8 -41.4 50.0 0.333 0.0 HOH
 2.867
 OD2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p17174-f1 1 P17174 100.0 0.0 ASN A:176 A:176 59.0 0.369 H -62.3 -39.7