Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 101165998 . T A CCDS7479.1:NM_002079.2:c.433Aat>Tat_NP_002070.1:p.145N>Y Homo sapiens glutamic-oxaloacetic transaminase 1 (GOT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3wzf 1 P17174 100.0 0.0 X-RAY
 2015-10-07 ASN A:144 A:144 62.0 0.388 H -58.2 -56.9 62.0 0.388 0.0
6dnd 1 P17174 100.0 0.0 X-RAY
 2018-11-14 ASN A:143 A:145 77.0 0.481 H -57.3 -53.7 77.0 0.481 0.0
ASN B:143 B:145 76.0 0.475 H -57.5 -53.1 NA NA NA
6lig 1 P17174 100.0 0.0 X-RAY
 2020-12-16 ASN A:143 A:145 64.0 0.4 H -63.8 -37.3 64.0 0.4 0.0 EE6
HOH
 9.626
4.727
 N
ND2
 C24
O
ASN B:143 B:145 79.0 0.494 H -64.5 -40.7 79.0 0.494 0.0 PLP
HOH
 9.853
5.004
 N
O
 N1
O
6dnb 1 P17174 99.27 0.0 X-RAY
 2018-11-14 ASN A:143 A:145 58.0 0.362 H -58.7 -46.4 58.0 0.362 0.0 HOH
 2.531
 ND2
 O
6dna 1 P17174 99.75 0.0 X-RAY
 2018-11-14 ASN A:140 A:145 81.0 0.506 H -52.3 -47.5 81.0 0.506 0.0
ASN B:140 B:145 79.0 0.494 H -55.2 -45.5 NA NA NA
ASN C:140 C:145 78.0 0.487 H -59.0 -40.4 NA NA NA
ASN D:140 D:145 78.0 0.487 H -49.0 -48.9 NA NA NA
ASN E:140 E:145 66.0 0.412 H -55.6 -44.2 NA NA NA
ASN F:140 F:145 80.0 0.5 H -53.3 -44.5 NA NA NA
3ii0 1 P17174 100.0 0.0 X-RAY
 2009-08-11 ASN A:133 A:145 79.0 0.494 H -59.5 -45.8 79.0 0.494 0.0 HOH
 2.587
 ND2
 O
ASN B:133 B:145 79.0 0.494 H -57.7 -44.4 NA NA NA
ASN C:133 C:145 81.0 0.506 H -53.1 -46.1 NA NA NA
ASN D:133 D:145 81.0 0.506 H -59.0 -45.9 NA NA NA
5toq 1 P00503 92.01 0.0 X-RAY
 2017-03-01 ASN A:146 A:144 84.0 0.525 H -59.7 -46.5 84.0 0.525 0.0 HOH
 2.565
 ND2
 O
ASN B:146 B:144 75.0 0.469 H -60.4 -47.5 75.0 0.469 0.0 HOH
 2.834
 N
 O
5vk7 1 P00503 92.01 0.0 X-RAY
 2017-11-01 ASN A:146 A:144 65.0 0.406 H -58.5 -52.0 65.0 0.406 0.0 HOH
 2.791
 CB
 O
ASN B:146 B:144 45.0 0.281 H -61.6 -47.5 45.0 0.281 0.0 HOH
 5.009
 ND2
 O
1ajr 1 P00503 91.99 0.0 X-RAY
 1997-08-20 ASN A:144 A:144 66.0 0.412 H -61.0 -48.9 66.0 0.412 0.0 HOH
 2.500
 OD1
 O
ASN B:144 B:144 64.0 0.4 H -57.4 -48.1 64.0 0.4 0.0 HOH
 4.845
 ND2
 O
1ajs 1 P00503 91.99 0.0 X-RAY
 1997-08-20 ASN A:144 A:144 62.0 0.388 H -60.7 -48.6 62.0 0.388 0.0 PLA
HOH
 9.912
4.942
 N
OD1
 N1
O
1ajs 2 P00503 91.99 0.0 X-RAY
 1997-08-20 ASN B:144 B:144 64.0 0.4 H -57.3 -47.4 64.0 0.4 0.0 HOH
 4.932
 ND2
 O
5vjz 1 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 ASN A:144 A:144 62.0 0.388 H -60.0 -49.9 62.0 0.388 0.0 PLA
 8.573
 D
 D2A1
5vjz 2 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 ASN B:144 B:144 55.0 0.344 H -55.7 -47.4 NA NA NA
5tor 1 P00503 91.77 0.0 X-RAY
 2017-03-01 ASN A:146 A:144 62.0 0.388 H -59.1 -43.7 62.0 0.388 0.0 HOH
 2.732
 OD1
 O
ASN B:146 B:144 70.0 0.438 H -53.1 -48.8 70.0 0.438 0.0 HOH
 2.248
 OD1
 O
5ton 1 P00503 91.77 0.0 X-RAY
 2017-03-01 ASN A:146 A:144 84.0 0.525 H -58.1 -43.1 84.0 0.525 0.0 HOH
 2.998
 N
 O
ASN B:146 B:144 83.0 0.519 H -58.7 -43.3 83.0 0.519 0.0 HOH
 3.004
 N
 O
5tot 1 P00503 91.53 0.0 X-RAY
 2017-03-01 ASN A:146 A:144 82.0 0.512 H -58.7 -42.0 82.0 0.512 0.0 HOH
 2.953
 N
 O
ASN B:146 B:144 83.0 0.519 H -57.0 -43.9 83.0 0.519 0.0 HOH
 2.586
 ND2
 O
2cst 1 P00504 80.44 0.0 X-RAY
 1994-11-30 ASN A:143 A:144 55.0 0.344 H -53.9 -52.2 55.0 0.344 0.0 PLP
HOH
 9.866
2.750
 N
OD1
 N1
O
ASN B:143 B:144 52.0 0.325 H -54.6 -52.0 52.0 0.325 0.0 PLP
HOH
 9.767
3.208
 N
ND2
 N1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p17174-f1 1 P17174 100.0 0.0 ASN A:145 A:145 59.0 0.369 H -59.7 -46.2