Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 101180424 . C A CCDS7479.1:NM_002079.2:c.257cGt>cTt_NP_002070.1:p.86R>L Homo sapiens glutamic-oxaloacetic transaminase 1 (GOT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3wzf 1 P17174 100.0 0.0 X-RAY
 2015-10-07 ARG A:85 A:85 90.0 0.4 H -61.0 -31.3 90.0 0.4 0.0
6dnd 1 P17174 100.0 0.0 X-RAY
 2018-11-14 ARG A:84 A:86 85.0 0.378 H -59.3 -39.2 85.0 0.378 0.0 HOH
 8.190
 C
 O
ARG B:84 B:86 83.0 0.369 H -59.4 -39.9 NA NA NA
6lig 1 P17174 100.0 0.0 X-RAY
 2020-12-16 ARG A:84 A:86 83.0 0.369 H -65.7 -31.3 83.0 0.369 0.0 HOH
 7.615
 O
 O
ARG B:84 B:86 111.0 0.493 H -69.6 -27.1 111.0 0.493 0.0 HOH
 3.442
 O
 O
6dnb 1 P17174 99.27 0.0 X-RAY
 2018-11-14 ARG A:84 A:86 82.0 0.364 H -58.6 -41.6 82.0 0.364 0.0 PG4
HOH
 2.388
3.297
 O
NH1
 O1
O
6dna 1 P17174 99.75 0.0 X-RAY
 2018-11-14 ARG A:81 A:86 92.0 0.409 H -69.9 -33.4 92.0 0.409 0.0
ARG B:81 B:86 85.0 0.378 H -70.5 -32.1 NA NA NA
ARG C:81 C:86 66.0 0.293 H -69.7 -32.9 NA NA NA
ARG D:81 D:86 85.0 0.378 H -68.4 -34.8 NA NA NA
ARG E:81 E:86 80.0 0.356 H -69.8 -33.7 NA NA NA
ARG F:81 F:86 91.0 0.404 H -68.8 -35.2 NA NA NA
3ii0 1 P17174 100.0 0.0 X-RAY
 2009-08-11 ARG A:74 A:86 81.0 0.36 H -60.5 -44.3 81.0 0.36 0.0 EDO
HOH
 6.459
4.409
 N
O
 O2
O
ARG B:74 B:86 81.0 0.36 H -61.9 -39.0 NA NA NA
ARG C:74 C:86 85.0 0.378 H -68.6 -38.8 NA NA NA
ARG D:74 D:86 85.0 0.378 H -65.6 -36.1 NA NA NA
5toq 1 P00503 92.01 0.0 X-RAY
 2017-03-01 ARG A:87 A:85 74.0 0.329 H -64.6 -36.7 74.0 0.329 0.0 HOH
 2.367
 NH2
 O
ARG B:87 B:85 116.0 0.516 H -64.7 -38.7 116.0 0.516 0.0 HOH
 3.034
 CG
 O
5vk7 1 P00503 92.01 0.0 X-RAY
 2017-11-01 ARG A:87 A:85 68.0 0.302 H -66.1 -33.3 68.0 0.302 0.0 HOH
 3.485
 NE
 O
ARG B:87 B:85 91.0 0.404 H -63.9 -36.8 91.0 0.404 0.0 HOH
 6.053
 N
 O
1ajr 1 P00503 91.99 0.0 X-RAY
 1997-08-20 ARG A:85 A:85 87.0 0.387 H -62.7 -35.7 87.0 0.387 0.0 HOH
 3.616
 NH2
 O
ARG B:85 B:85 79.0 0.351 H -63.0 -37.6 79.0 0.351 0.0 HOH
 3.612
 NH1
 O
1ajs 1 P00503 91.99 0.0 X-RAY
 1997-08-20 ARG A:85 A:85 78.0 0.347 H -60.8 -40.9 78.0 0.347 0.0 HOH
 3.528
 O
 O
1ajs 2 P00503 91.99 0.0 X-RAY
 1997-08-20 ARG B:85 B:85 80.0 0.356 H -63.1 -38.9 80.0 0.356 0.0 HOH
 3.273
 NE
 O
5vjz 1 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 ARG A:85 A:85 101.0 0.449 H -62.3 -40.5 101.0 0.449 0.0
5vjz 2 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 ARG B:85 B:85 81.0 0.36 H -57.2 -43.1 NA NA NA
5tor 1 P00503 91.77 0.0 X-RAY
 2017-03-01 ARG A:87 A:85 69.0 0.307 H -65.5 -36.7 69.0 0.307 0.0 HOH
 2.170
 NH2
 O
ARG B:87 B:85 101.0 0.449 H -64.8 -37.8 101.0 0.449 0.0 HOH
 2.453
 NH1
 O
5ton 1 P00503 91.77 0.0 X-RAY
 2017-03-01 ARG A:87 A:85 71.0 0.316 H -66.0 -36.0 71.0 0.316 0.0 HOH
 2.771
 O
 O
ARG B:87 B:85 71.0 0.316 H -63.4 -40.5 71.0 0.316 0.0 HOH
 3.449
 CD
 O
5tot 1 P00503 91.53 0.0 X-RAY
 2017-03-01 ARG A:87 A:85 75.0 0.333 H -65.2 -35.6 75.0 0.333 0.0 HOH
 2.639
 NH1
 O
ARG B:87 B:85 70.0 0.311 H -66.2 -37.3 70.0 0.311 0.0 HOH
 3.365
 NH2
 O
2cst 1 P00504 80.44 0.0 X-RAY
 1994-11-30 ARG A:84 A:85 51.0 0.227 H -63.4 -41.0 51.0 0.227 0.0 HOH
 2.688
 NH2
 O
ARG B:84 B:85 49.0 0.218 H -58.7 -41.5 49.0 0.218 0.0 HOH
 3.960
 NH1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p17174-f1 1 P17174 100.0 0.0 ARG A:86 A:86 114.0 0.507 H -60.4 -42.7