Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 101180550 . T A CCDS7479.1:NM_002079.2:c.131gAt>gTt_NP_002070.1:p.44D>V Homo sapiens glutamic-oxaloacetic transaminase 1 (GOT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3wzf 1 P17174 100.0 0.0 X-RAY
 2015-10-07 ASP A:43 A:43 44.0 0.293 T -71.0 -12.8 44.0 0.293 0.0 HOH
 9.307
 N
 O
6dnd 1 P17174 100.0 0.0 X-RAY
 2018-11-14 ASP A:42 A:44 55.0 0.367 T -58.1 -22.5 55.0 0.367 0.0 HOH
 5.566
 N
 O
ASP B:42 B:44 54.0 0.36 T -58.4 -21.2 NA NA NA
6lig 1 P17174 100.0 0.0 X-RAY
 2020-12-16 ASP A:42 A:44 53.0 0.353 T -64.4 -15.7 53.0 0.353 0.0 HOH
 5.053
 N
 O
ASP B:42 B:44 50.0 0.333 T -66.8 -11.0 50.0 0.333 0.0 HOH
 8.081
 OD1
 O
6dnb 1 P17174 99.27 0.0 X-RAY
 2018-11-14 ASP A:42 A:44 40.0 0.267 T -60.9 -22.8 40.0 0.267 0.0 PO4
HOH
 4.480
2.681
 N
O
 O4
O
6dna 1 P17174 99.75 0.0 X-RAY
 2018-11-14 ASP A:39 A:44 45.0 0.3 T -71.7 -13.4 45.0 0.3 0.0
ASP B:39 B:44 50.0 0.333 T -70.9 -15.5 NA NA NA
ASP C:39 C:44 52.0 0.347 T -70.6 -13.9 NA NA NA
ASP D:39 D:44 47.0 0.313 T -70.5 -12.6 NA NA NA
ASP E:39 E:44 50.0 0.333 T -71.5 -9.7 NA NA NA
ASP F:39 F:44 50.0 0.333 T -70.7 -10.5 NA NA NA
3ii0 1 P17174 100.0 0.0 X-RAY
 2009-08-11 ASP A:32 A:44 52.0 0.347 T -69.0 -12.6 52.0 0.347 0.0 EDO
HOH
 4.459
2.596
 N
OD1
 O2
O
ASP B:32 B:44 53.0 0.353 T -58.3 -18.5 NA NA NA
ASP C:32 C:44 50.0 0.333 T -64.1 -13.9 NA NA NA
ASP D:32 D:44 49.0 0.327 T -68.5 -5.2 NA NA NA
5toq 1 P00503 92.01 0.0 X-RAY
 2017-03-01 ASP A:45 A:43 55.0 0.367 T -63.9 -17.0 55.0 0.367 0.0 HOH
 2.608
 OD2
 O
ASP B:45 B:43 57.0 0.38 T -65.6 -16.5 57.0 0.38 0.0 HOH
 2.575
 OD1
 O
5vk7 1 P00503 92.01 0.0 X-RAY
 2017-11-01 ASP A:45 A:43 49.0 0.327 T -69.6 -16.0 49.0 0.327 0.0 HOH
 3.136
 OD1
 O
ASP B:45 B:43 42.0 0.28 T -69.6 -20.2 42.0 0.28 0.0 HOH
 2.526
 OD1
 O
1ajr 1 P00503 91.99 0.0 X-RAY
 1997-08-20 ASP A:43 A:43 39.0 0.26 T -70.2 -11.3 39.0 0.26 0.0 HOH
 2.597
 N
 O
ASP B:43 B:43 48.0 0.32 T -65.1 -15.6 48.0 0.32 0.0 HOH
 2.841
 N
 O
1ajs 1 P00503 91.99 0.0 X-RAY
 1997-08-20 ASP A:43 A:43 41.0 0.273 T -67.3 -19.3 41.0 0.273 0.0 HOH
 5.977
 N
 O
1ajs 2 P00503 91.99 0.0 X-RAY
 1997-08-20 ASP B:43 B:43 43.0 0.287 T -66.4 -14.7 43.0 0.287 0.0 HOH
 2.812
 N
 O
5vjz 1 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 ASP A:43 A:43 31.0 0.207 T -77.6 -16.3 31.0 0.207 0.0
5vjz 2 P00503 91.99 0.0 NEUTRON DIFFRACTION
X-RAY
 2017-11-01 ASP B:43 B:43 43.0 0.287 T -66.1 -9.8 NA NA NA
5tor 1 P00503 91.77 0.0 X-RAY
 2017-03-01 ASP A:45 A:43 45.0 0.3 T -65.1 -15.6 45.0 0.3 0.0 HOH
 2.598
 OD2
 O
ASP B:45 B:43 40.0 0.267 T -63.7 -15.7 40.0 0.267 0.0 HOH
 2.793
 N
 O
5ton 1 P00503 91.77 0.0 X-RAY
 2017-03-01 ASP A:45 A:43 45.0 0.3 T -64.5 -16.3 45.0 0.3 0.0 HOH
 2.716
 O
 O
ASP B:45 B:43 39.0 0.26 T -66.6 -17.0 39.0 0.26 0.0 HOH
 2.625
 OD1
 O
5tot 1 P00503 91.53 0.0 X-RAY
 2017-03-01 ASP A:45 A:43 45.0 0.3 T -64.5 -15.1 45.0 0.3 0.0 HOH
 2.659
 O
 O
ASP B:45 B:43 45.0 0.3 T -65.4 -15.1 45.0 0.3 0.0 HOH
 2.722
 OD1
 O
2cst 1 P00504 80.44 0.0 X-RAY
 1994-11-30 ASP A:42 A:43 55.0 0.367 T -66.9 -13.1 55.0 0.367 0.0 HOH
 2.715
 OD1
 O
ASP B:42 B:43 59.0 0.393 T -66.4 -20.6 59.0 0.393 0.0 HOH
 2.509
 OD1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p17174-f1 1 P17174 100.0 0.0 ASP A:44 A:44 41.0 0.273 T -66.2 -13.7