Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 103339447 . G A CCDS7513.1:NM_001174084.1:c.1491agC>agT_NP_001167555.1:p.497S>S Homo sapiens DNA polymerase lambda (POLL), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4xq8 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 SER A:256 B:497 94.0 0.817 G -46.7 -35.1 94.0 0.817 0.0
SER B:256 A:497 89.0 0.774 G -72.9 -9.0 NA NA NA
5ca7 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 SER A:256 B:497 92.0 0.8 G -74.1 -19.9 92.0 0.8 0.0 HOH
2.926
O
O
SER B:256 A:497 88.0 0.765 G -71.6 -17.3 NA NA NA
5iii 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 SER A:256 A:497 103.0 0.896 G -66.1 -16.5 103.0 0.896 0.0 HOH
2.815
N
O
5iij 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 SER A:256 A:497 100.0 0.87 G -66.1 -19.3 100.0 0.87 0.0 HOH
2.898
N
O
5iik 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 SER A:256 A:497 100.0 0.87 G -63.8 -18.6 100.0 0.87 0.0 HOH
2.620
OG
O
5iil 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 SER A:256 A:497 97.0 0.843 G -64.4 -19.9 97.0 0.843 0.0 HOH
2.618
OG
O
5iim 1 Q9UGP5 100.0 0.0 X-RAY
2016-09-07 SER A:256 A:497 100.0 0.87 G -63.5 -16.6 100.0 0.87 0.0 HOH
2.803
O
O
5iin 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 SER A:256 A:497 94.0 0.817 G -62.4 -24.2 94.0 0.817 0.0 HOH
2.870
O
O
5iio 4 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 SER M:256 A:497 95.0 0.826 G -68.6 -21.7 95.0 0.826 0.0 HOH
2.685
OG
O
SER N:256 E:497 92.0 0.8 G -66.4 -18.4 NA NA NA
SER O:256 I:497 94.0 0.817 G -65.0 -21.6 NA NA NA
SER P:256 M:497 94.0 0.817 G -66.5 -18.8 NA NA NA
1xsl 4 Q9UGP5 100.0 0.0 X-RAY
2005-01-18 SER M:257 A:497 94.0 0.817 G -57.7 -21.6 94.0 0.817 0.0 HOH
2.662
OG
O
SER N:257 E:497 90.0 0.783 H -65.2 -15.8 NA NA NA
SER O:257 I:497 93.0 0.809 G -65.3 -12.2 NA NA NA
SER P:257 M:497 96.0 0.835 G -62.6 -14.6 NA NA NA
2bcq 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 SER D:257 A:497 99.0 0.861 G -60.6 -22.6 99.0 0.861 0.0 EDO
HOH
9.520
2.946
C
O
O1
O
2bcr 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 SER D:257 A:497 100.0 0.87 G -63.6 -20.3 100.0 0.87 0.0 EDO
HOH
9.193
2.472
C
OG
O1
O
2bcs 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 SER D:257 A:497 100.0 0.87 G -60.8 -22.6 100.0 0.87 0.0 HOH
2.828
O
O
2bcu 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 SER D:257 A:497 103.0 0.896 G -66.6 -19.4 103.0 0.896 0.0 HOH
2.819
O
O
2bcv 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 SER D:257 A:497 103.0 0.896 G -64.0 -19.2 103.0 0.896 0.0 HOH
2.968
N
O
2gws 4 Q9UGP5 100.0 0.0 X-RAY
2006-09-05 SER M:257 A:497 97.0 0.843 G -67.8 -14.6 97.0 0.843 0.0 HOH
2.870
O
O
SER N:257 E:497 92.0 0.8 G -61.4 -17.6 NA NA NA
SER O:257 I:497 94.0 0.817 G -62.8 -17.1 NA NA NA
SER P:257 M:497 97.0 0.843 G -59.9 -19.7 NA NA NA
4xrh 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 SER A:257 B:497 99.0 0.861 G -62.7 -24.5 99.0 0.861 0.0
SER B:257 A:497 90.0 0.783 G -74.1 -11.4 NA NA NA
5ddm 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 SER A:257 B:497 94.0 0.817 G -67.5 -12.3 94.0 0.817 0.0 HOH
5.039
O
O
SER B:257 A:497 86.0 0.748 G -68.5 -17.1 NA NA NA
5ddy 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 SER A:257 A:497 87.0 0.757 T -67.5 -38.6 87.0 0.757 0.0
SER B:257 C:497 88.0 0.765 G -66.2 -27.1 NA NA NA
SER C:257 E:497 97.0 0.843 T -60.5 -34.3 NA NA NA
SER D:257 G:497 96.0 0.835 S -66.5 -39.5 NA NA NA
3c5g 1 Q9UGP5 99.7 0.0 X-RAY
2008-07-29 SER A:257 A:497 97.0 0.843 G -63.1 -18.6 97.0 0.843 0.0 HOH
2.693
O
O
SER E:257 B:497 91.0 0.791 G -63.6 -21.5 NA NA NA
5chg 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 SER A:256 A:497 91.0 0.791 G -70.2 -18.1 91.0 0.791 0.0
SER B:256 B:497 89.0 0.774 G -72.3 -11.5 NA NA NA
5cj7 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 SER A:256 A:497 98.0 0.852 T -78.5 -9.2 98.0 0.852 0.0
SER B:256 B:497 89.0 0.774 G -72.8 -8.9 NA NA NA
5cp2 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 SER A:256 A:497 80.0 0.696 G -72.3 -12.4 80.0 0.696 0.0 HOH
2.873
O
O
SER B:256 B:497 95.0 0.826 G -59.6 -31.4 NA NA NA
5cr0 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 SER A:256 A:497 101.0 0.878 T -66.6 -22.0 101.0 0.878 0.0
SER B:256 B:497 89.0 0.774 G -72.7 -23.8 NA NA NA
3c5f 4 Q9UGP5 99.7 0.0 X-RAY
2008-09-02 SER G:257 A:497 97.0 0.843 G -68.1 -20.5 97.0 0.843 0.0 NA
HOH
3.005
2.578
O
O
NA
O
SER H:257 B:497 85.0 0.739 G -66.5 -24.1 NA NA NA
1xsn 4 Q9UGP5 99.7 0.0 X-RAY
2005-01-18 SER D:257 A:497 103.0 0.896 G -57.2 -27.8 103.0 0.896 0.0 HOH
2.636
OG
O
1xsp 4 Q9UGP5 99.7 0.0 X-RAY
2005-01-18 SER D:257 A:497 101.0 0.878 G -64.0 -21.6 101.0 0.878 0.0 HOH
2.910
O
O
2pfn 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 SER D:257 A:497 100.0 0.87 G -59.2 -20.3 100.0 0.87 0.0 HOH
3.056
N
O
2pfo 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 SER D:257 A:497 100.0 0.87 G -56.1 -25.3 100.0 0.87 0.0 HOH
3.110
OG
O
2pfp 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 SER D:257 A:497 98.0 0.852 G -62.6 -21.0 98.0 0.852 0.0 HOH
2.615
N
O
2pfq 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 SER D:257 A:497 97.0 0.843 G -60.7 -30.7 97.0 0.843 0.0 HOH
3.837
O
O
3hw8 1 Q9UGP5 99.7 0.0 X-RAY
2009-08-25 SER A:257 A:497 99.0 0.861 G -64.6 -16.4 99.0 0.861 0.0 HOH
3.004
OG
O
3hwt 1 Q9UGP5 99.7 0.0 X-RAY
2009-08-25 SER A:257 A:497 103.0 0.896 G -63.9 -19.0 103.0 0.896 0.0 HOH
2.973
O
O
1rzt 4 Q9UGP5 100.0 0.0 X-RAY
2004-03-02 SER M:253 A:497 97.0 0.843 G -63.0 -20.2 97.0 0.843 0.0 HOH
2.732
O
O
SER N:253 E:497 87.0 0.757 G -60.4 -15.1 NA NA NA
SER O:253 I:497 95.0 0.826 G -65.0 -20.8 NA NA NA
SER P:253 M:497 96.0 0.835 G -62.5 -17.5 NA NA NA
4k4g 1 Q9UGP5 100.0 0.0 X-RAY
2014-07-16 SER A:254 A:497 101.0 0.878 G -64.6 -18.7 101.0 0.878 0.0 HOH
3.165
N
O
SER E:254 E:497 106.0 0.922 G -62.7 -23.7 NA NA NA
SER I:254 I:497 92.0 0.8 G -58.2 -18.2 NA NA NA
SER M:254 M:497 90.0 0.783 G -65.0 -23.4 NA NA NA
4k4h 1 Q9UGP5 100.0 0.0 X-RAY
2014-07-16 SER A:254 A:497 98.0 0.852 G -68.4 -12.6 98.0 0.852 0.0 ACT
HOH
8.853
2.758
O
O
O
O
SER E:254 E:497 97.0 0.843 G -75.1 -15.8 NA NA NA
SER I:254 I:497 90.0 0.783 G -48.8 -31.0 NA NA NA
SER M:254 M:497 87.0 0.757 G -64.3 -20.4 NA NA NA
4k4i 1 Q9UGP5 100.0 0.0 X-RAY
2014-07-16 SER A:254 A:497 97.0 0.843 G -62.0 -19.7 97.0 0.843 0.0 ACT
HOH
9.076
2.810
O
OG
O
O
SER E:254 E:497 99.0 0.861 G -70.7 -14.8 NA NA NA
SER I:254 I:497 91.0 0.791 G -57.1 -26.2 NA NA NA
SER M:254 M:497 88.0 0.765 G -64.9 -21.4 NA NA NA
3hx0 1 Q9UGP5 98.8 0.0 X-RAY
2009-08-25 SER A:257 A:497 103.0 0.896 T -94.5 -7.1 103.0 0.896 0.0
SER E:257 F:497 100.0 0.87 G -76.1 -9.1 NA NA NA
SER I:257 K:497 103.0 0.896 H -67.6 -5.0 NA NA NA
SER M:257 P:497 95.0 0.826 T -71.3 -21.6 NA NA NA
5dkw 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 SER A:249 A:497 97.0 0.843 G -57.7 -35.7 97.0 0.843 0.0 HOH
2.548
OG
O
SER B:249 B:497 93.0 0.809 G -53.8 -38.0 NA NA NA
5cb1 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 SER A:248 A:497 84.0 0.73 H -70.2 -40.1 84.0 0.73 0.0
SER B:248 B:497 93.0 0.809 T -64.6 -38.7 NA NA NA
4x5v 1 Q9UGP5 100.0 0.0 X-RAY
2015-10-28 SER A:247 A:497 101.0 0.878 G -64.8 -21.3 101.0 0.878 0.0 HOH
3.023
O
O
4xa5 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-10 SER A:247 A:497 100.0 0.87 G -61.6 -19.9 100.0 0.87 0.0 GOL
HOH
8.555
2.838
OG
O
C1
O
4xus 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-03 SER A:247 A:497 99.0 0.861 G -54.6 -33.5 99.0 0.861 0.0 HOH
3.143
O
O
5cwr 1 Q9UGP5 99.69 0.0 X-RAY
2016-02-24 SER A:248 A:497 98.0 0.852 G -62.3 -18.7 98.0 0.852 0.0 HOH
2.793
O
O
SER D:248 B:497 95.0 0.826 H -58.5 -18.9 NA NA NA
3mda 1 Q9UGP5 100.0 0.0 X-RAY
2010-04-28 SER A:247 A:497 100.0 0.87 G -61.2 -26.5 100.0 0.87 0.0 HOH
2.943
O
O
3mdc 1 Q9UGP5 100.0 0.0 X-RAY
2010-04-28 SER A:247 A:497 104.0 0.904 G -64.0 -24.2 104.0 0.904 0.0 HOH
3.020
O
O
3mgh 1 Q9UGP5 97.6 0.0 X-RAY
2010-05-19 SER A:251 A:497 93.0 0.809 G -57.7 -24.6 93.0 0.809 0.0 HOH
2.903
O
O
SER E:251 C:497 99.0 0.861 G -73.2 -9.8 NA NA NA
3mgi 1 Q9UGP5 97.6 0.0 X-RAY
2010-05-19 SER A:251 A:497 98.0 0.852 G -68.3 -17.7 98.0 0.852 0.0 HOH
2.874
N
O
3pml 1 Q9UGP5 97.6 0.0 X-RAY
2011-01-26 SER A:251 A:497 97.0 0.843 G -54.6 -32.1 97.0 0.843 0.0 HOH
3.211
O
O
SER B:251 B:497 101.0 0.878 G -74.3 -14.4 NA NA NA
3pmn 1 Q9UGP5 97.6 0.0 X-RAY
2011-02-02 SER A:251 A:497 104.0 0.904 G -66.7 -16.4 104.0 0.904 0.0 HOH
2.757
N
O
3pnc 1 Q9UGP5 97.6 0.0 X-RAY
2011-02-02 SER A:251 A:497 103.0 0.896 G -63.5 -15.2 103.0 0.896 0.0 HOH
2.854
N
O
3upq 1 Q9UGP5 97.6 0.0 X-RAY
2012-05-23 SER A:251 A:497 106.0 0.922 G -60.9 -16.0 106.0 0.922 0.0 SO4
HOH
5.971
3.397
OG
O
O2
O
3uq0 1 Q9UGP5 97.6 0.0 X-RAY
2012-05-23 SER A:251 A:497 99.0 0.861 G -65.0 -19.3 99.0 0.861 0.0 SO4
HOH
6.671
2.863
OG
O
O1
O
3uq2 1 Q9UGP5 97.31 0.0 X-RAY
2012-05-23 SER A:251 A:497 97.0 0.843 G -57.1 -34.1 97.0 0.843 0.0 HOH
2.781
OG
O
4fo6 1 Q9UGP5 97.31 0.0 X-RAY
2012-07-11 SER A:251 A:497 77.0 0.67 G -60.9 -26.4 77.0 0.67 0.0 DG
HOH
8.493
3.410
O
O
O3'
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9ugp5-f1 1 Q9UGP5 100.0 0.0 SER A:497 A:497 92.0 0.8 G -62.0 -21.9