Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 103339467 . T A CCDS7513.1:NM_001174084.1:c.1471Atc>Ttc_NP_001167555.1:p.491I>F Homo sapiens DNA polymerase lambda (POLL), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4xq8 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ILE A:250 B:491 0.0 0.0 E -127.3 123.1 0.0 0.0 0.0 DA
DC
HOH
8.984
9.016
9.053
N
N
CG2
O3'
OP1
O
ILE B:250 A:491 0.0 0.0 E -121.0 128.0 NA NA NA
5ca7 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ILE A:250 B:491 1.0 0.006 E -118.7 123.1 1.0 0.006 0.0 DA
DC
HOH
9.053
9.297
9.316
N
N
O
O3'
OP1
O
ILE B:250 A:491 0.0 0.0 E -123.8 124.5 NA NA NA
5iii 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ILE A:250 A:491 0.0 0.0 E -123.8 133.4 0.0 0.0 0.0 DOC
DA
DC
DTP
MG
HOH
8.007
8.307
7.513
9.290
9.584
6.465
N
O
O
N
N
O
C4'
O3'
OP1
O1A
MG
O
5iij 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ILE A:250 A:491 0.0 0.0 E -121.4 134.1 0.0 0.0 0.0 DOC
DA
DC
DCT
MG
HOH
7.875
8.248
7.427
9.154
9.502
6.176
N
O
O
N
N
O
C4'
O3'
OP1
C5'
MG
O
5iik 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ILE A:250 A:491 0.0 0.0 E -121.5 136.8 0.0 0.0 0.0 DC
DT
DA
DC
NA
HOH
7.929
8.177
8.180
7.433
9.732
6.140
N
N
O
O
N
O
C4'
OP1
O3'
OP1
NA
O
5iil 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ILE A:250 A:491 0.0 0.0 E -122.0 135.2 0.0 0.0 0.0 DA
DT
DA
DC
NA
HOH
7.829
8.315
8.261
7.572
9.685
5.422
N
N
O
O
N
O
C4'
OP1
O3'
OP1
NA
O
5iim 1 Q9UGP5 100.0 0.0 X-RAY
2016-09-07 ILE A:250 A:491 0.0 0.0 E -125.5 134.7 0.0 0.0 0.0 DA
DA
DC
DUP
NA
HOH
6.659
8.215
7.570
9.151
9.594
6.468
N
O
O
N
N
O
O3'
O3'
OP1
O1A
NA
O
5iin 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ILE A:250 A:491 0.0 0.0 E -125.6 130.7 0.0 0.0 0.0 DC
DA
DC
DUP
MG
HOH
6.745
8.301
7.494
9.192
9.615
5.995
N
O
O
N
N
O
O3'
O3'
OP1
O2A
MG
O
5iio 4 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ILE M:250 A:491 0.0 0.0 E -127.1 125.6 0.0 0.0 0.0 DC
HOH
8.011
5.974
N
N
O3'
O
ILE N:250 E:491 0.0 0.0 E -120.5 128.3 NA NA NA
ILE O:250 I:491 0.0 0.0 E -127.1 124.2 NA NA NA
ILE P:250 M:491 0.0 0.0 E -127.0 126.1 NA NA NA
1xsl 4 Q9UGP5 100.0 0.0 X-RAY
2005-01-18 ILE M:251 A:491 0.0 0.0 E -127.3 127.7 0.0 0.0 0.0 DC
HOH
7.837
5.849
N
N
O3'
O
ILE N:251 E:491 0.0 0.0 E -131.5 121.9 NA NA NA
ILE O:251 I:491 0.0 0.0 E -125.0 123.8 NA NA NA
ILE P:251 M:491 0.0 0.0 E -125.0 132.0 NA NA NA
2bcq 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ILE D:251 A:491 0.0 0.0 E -123.8 136.5 0.0 0.0 0.0 DC
DG
DA
DC
MG
EDO
HOH
7.900
8.381
8.086
7.396
9.519
6.436
6.253
N
N
O
O
N
O
O
O3'
OP1
O3'
OP1
MG
O2
O
2bcr 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ILE D:251 A:491 0.0 0.0 E -118.7 136.8 0.0 0.0 0.0 DC
DG
DA
DC
MG
EDO
HOH
7.829
8.207
8.142
7.446
9.523
7.067
6.235
N
N
O
O
N
O
O
O3'
OP1
O3'
OP1
MG
C2
O
2bcs 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ILE D:251 A:491 0.0 0.0 E -121.3 134.7 0.0 0.0 0.0 DC
DG
DA
DC
MG
HOH
7.893
8.336
8.078
7.418
9.676
6.415
N
N
O
O
N
O
O3'
OP1
O3'
OP1
MG
O
2bcu 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ILE D:251 A:491 0.0 0.0 E -120.5 133.7 0.0 0.0 0.0 DC
DG
DA
DC
NA
HOH
8.027
8.383
8.256
7.523
9.754
6.003
N
N
O
O
N
O
O3'
OP1
O3'
OP1
NA
O
2bcv 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ILE D:251 A:491 0.0 0.0 E -116.6 132.5 0.0 0.0 0.0 O2C
DA
DC
MG
NA
TTP
HOH
7.801
8.073
7.334
9.139
6.809
9.015
5.300
N
O
O
N
N
N
O
C4'
O3'
OP1
MG
NA
C5'
O
2gws 4 Q9UGP5 100.0 0.0 X-RAY
2006-09-05 ILE M:251 A:491 0.0 0.0 E -125.7 126.4 0.0 0.0 0.0 DG
HOH
7.793
5.875
N
N
O3'
O
ILE N:251 E:491 0.0 0.0 E -124.5 120.2 NA NA NA
ILE O:251 I:491 0.0 0.0 E -128.5 119.2 NA NA NA
ILE P:251 M:491 0.0 0.0 E -125.8 129.9 NA NA NA
4xrh 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ILE A:251 B:491 0.0 0.0 E -120.1 127.8 0.0 0.0 0.0 DA
DC
9.065
9.384
N
N
O3'
OP1
ILE B:251 A:491 0.0 0.0 E -121.6 122.6 NA NA NA
5ddm 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ILE A:251 B:491 0.0 0.0 E -126.5 129.5 0.0 0.0 0.0 DA
DC
HOH
8.952
9.080
9.229
N
N
CG2
O3'
OP1
O
ILE B:251 A:491 0.0 0.0 E -125.2 128.2 NA NA NA
5ddy 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ILE A:251 A:491 2.0 0.011 E -113.9 131.3 2.0 0.011 0.0 MG
MN
DCP
9.645
7.625
9.766
N
N
N
MG
MN
O2A
ILE B:251 C:491 1.0 0.006 E -107.1 123.0 NA NA NA
ILE C:251 E:491 2.0 0.011 E -125.0 120.3 NA NA NA
ILE D:251 G:491 4.0 0.023 E -114.4 124.5 NA NA NA
3c5g 1 Q9UGP5 99.7 0.0 X-RAY
2008-07-29 ILE A:251 A:491 0.0 0.0 E -126.3 128.1 0.0 0.0 0.0 DA
DC
2DT
MG
NA
D3T
HOH
8.877
7.850
8.229
9.720
7.440
9.497
5.604
O
O
N
N
N
N
N
O3'
OP1
C4'
MG
NA
C5'
O
ILE E:251 B:491 1.0 0.006 E -126.5 129.3 NA NA NA
5chg 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 ILE A:250 A:491 0.0 0.0 E -132.7 129.6 0.0 0.0 0.0 DA
DC
8.653
9.238
N
N
C4'
OP1
ILE B:250 B:491 0.0 0.0 E -125.6 131.6 NA NA NA
5cj7 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 ILE A:250 A:491 0.0 0.0 E -123.4 123.0 0.0 0.0 0.0 DA
DC
8.713
9.351
N
N
C4'
OP1
ILE B:250 B:491 0.0 0.0 E -127.1 127.6 NA NA NA
5cp2 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 ILE A:250 A:491 0.0 0.0 E -127.3 125.9 0.0 0.0 0.0 HOH
6.194
N
O
ILE B:250 B:491 0.0 0.0 E -136.5 127.6 NA NA NA
5cr0 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 ILE A:250 A:491 1.0 0.006 E -120.6 124.8 1.0 0.006 0.0 DA
DC
8.688
9.363
N
N
C4'
C5'
ILE B:250 B:491 0.0 0.0 E -128.5 132.9 NA NA NA
3c5f 4 Q9UGP5 99.7 0.0 X-RAY
2008-09-02 ILE G:251 A:491 0.0 0.0 E -128.9 120.2 0.0 0.0 0.0 DA
DC
DC
HOH
8.622
7.465
7.197
5.992
O
O
N
N
O3'
OP1
O3'
O
ILE H:251 B:491 0.0 0.0 E -121.7 129.9 NA NA NA
1xsn 4 Q9UGP5 99.7 0.0 X-RAY
2005-01-18 ILE D:251 A:491 0.0 0.0 E -120.5 137.5 0.0 0.0 0.0 DA
DC
2DT
MG
D3T
HOH
8.141
7.393
7.668
9.487
9.185
6.600
O
O
N
N
N
O
O3'
OP1
C3'
MG
C5'
O
1xsp 4 Q9UGP5 99.7 0.0 X-RAY
2005-01-18 ILE D:251 A:491 0.0 0.0 E -120.9 132.5 0.0 0.0 0.0 DA
DC
DC
DG
NA
HOH
8.148
7.414
7.982
8.350
9.707
6.505
O
O
N
N
N
O
O3'
OP1
O3'
OP1
NA
O
2pfn 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 ILE D:251 A:491 0.0 0.0 E -130.2 131.9 0.0 0.0 0.0 DA
DC
DC
MG
NA
DUP
HOH
8.211
7.444
6.593
9.407
7.068
9.042
6.302
O
O
N
N
N
N
O
O3'
OP1
O3'
MG
NA
O2A
O
2pfo 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 ILE D:251 A:491 0.0 0.0 E -139.2 140.9 0.0 0.0 0.0 DA
DC
DC
MG
MN
DUP
HOH
8.149
7.467
6.996
9.437
6.964
8.870
2.878
O
O
N
N
N
N
O
O3'
OP1
O3'
MG
MN
O2A
O
2pfp 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 ILE D:251 A:491 0.0 0.0 E -131.1 132.5 0.0 0.0 0.0 DA
DC
DC
MG
NA
DCP
HOH
8.189
7.401
6.652
9.647
7.324
9.192
6.227
O
O
N
N
N
N
O
O3'
OP1
O3'
MG
NA
C5'
O
2pfq 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 ILE D:251 A:491 2.0 0.011 E -143.1 126.8 2.0 0.011 0.0 DA
DC
DC
DC
MG
NA
MN
MN
DCP
HOH
8.083
7.361
7.258
8.689
9.534
7.051
9.423
7.108
9.190
5.574
O
O
N
N
N
N
N
N
N
O
O3'
OP1
O3'
OP1
MG
NA
MN
MN
O2A
O
3hw8 1 Q9UGP5 99.7 0.0 X-RAY
2009-08-25 ILE A:251 A:491 0.0 0.0 E -126.6 135.6 0.0 0.0 0.0 DA
DC
DT
MG
NA
D3T
HOH
8.149
7.477
7.809
9.303
6.888
8.906
5.393
O
O
N
N
N
N
O
O3'
OP1
C4'
MG
NA
C5'
O
3hwt 1 Q9UGP5 99.7 0.0 X-RAY
2009-08-25 ILE A:251 A:491 0.0 0.0 E -121.5 133.9 0.0 0.0 0.0 DA
DC
2DT
D3T
MG
HOH
8.119
7.330
7.744
9.064
9.417
5.619
O
O
N
N
N
O
O3'
OP1
C4'
C5'
MG
O
1rzt 4 Q9UGP5 100.0 0.0 X-RAY
2004-03-02 ILE M:247 A:491 0.0 0.0 E -124.6 127.2 0.0 0.0 0.0 HOH
6.378
N
O
ILE N:247 E:491 0.0 0.0 E -120.0 128.2 NA NA NA
ILE O:247 I:491 0.0 0.0 E -133.6 125.7 NA NA NA
ILE P:247 M:491 0.0 0.0 E -128.4 126.9 NA NA NA
4k4g 1 Q9UGP5 100.0 0.0 X-RAY
2014-07-16 ILE A:248 A:491 1.0 0.006 E -128.7 130.9 1.0 0.006 0.0 DA
DC
DC
1S0
CA
CA
HOH
9.455
8.239
7.976
8.407
9.795
7.688
5.576
O
O
N
N
N
N
O
O3'
OP1
O3'
OAE
CA
CA
O
ILE E:248 E:491 1.0 0.006 E -127.0 138.9 NA NA NA
ILE I:248 I:491 0.0 0.0 E -126.8 129.3 NA NA NA
ILE M:248 M:491 0.0 0.0 E -126.5 129.3 NA NA NA
4k4h 1 Q9UGP5 100.0 0.0 X-RAY
2014-07-16 ILE A:248 A:491 0.0 0.0 E -126.7 129.8 0.0 0.0 0.0 DA
DC
DC
1RZ
CA
CA
HOH
8.465
7.574
7.894
9.343
9.917
7.703
7.534
O
O
N
N
N
N
O
O3'
OP1
O3'
S3'
CA
CA
O
ILE E:248 E:491 0.0 0.0 E -121.6 127.8 NA NA NA
ILE I:248 I:491 0.0 0.0 E -128.6 128.8 NA NA NA
ILE M:248 M:491 0.0 0.0 E -123.6 131.6 NA NA NA
4k4i 1 Q9UGP5 100.0 0.0 X-RAY
2014-07-16 ILE A:248 A:491 0.0 0.0 E -124.5 132.8 0.0 0.0 0.0 DA
DC
DC
1RY
CA
CA
HOH
8.671
7.719
7.743
9.317
9.964
7.758
7.637
O
O
N
N
N
N
O
O3'
OP1
O3'
SAS
CA
CA
O
ILE E:248 E:491 0.0 0.0 E -125.1 130.2 NA NA NA
ILE I:248 I:491 0.0 0.0 E -131.2 127.8 NA NA NA
ILE M:248 M:491 0.0 0.0 E -129.8 128.5 NA NA NA
3hx0 1 Q9UGP5 98.8 0.0 X-RAY
2009-08-25 ILE A:251 A:491 0.0 0.0 E -119.1 140.4 0.0 0.0 0.0 DA
DC
DT
D3T
MG
8.552
7.543
7.760
9.338
9.571
O
O
N
N
N
O3'
OP1
C3'
C5'
MG
ILE E:251 F:491 0.0 0.0 E -122.1 136.4 NA NA NA
ILE I:251 K:491 0.0 0.0 E -116.2 131.5 NA NA NA
ILE M:251 P:491 0.0 0.0 E -132.6 124.6 NA NA NA
5dkw 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ILE A:243 A:491 0.0 0.0 E -126.9 118.4 0.0 0.0 0.0 DC
HOH
8.476
6.591
N
N
O3'
O
ILE B:243 B:491 0.0 0.0 E -124.0 123.4 NA NA NA
5cb1 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ILE A:242 A:491 0.0 0.0 E -113.3 121.3 0.0 0.0 0.0
ILE B:242 B:491 0.0 0.0 E -119.1 117.3 NA NA NA
4x5v 1 Q9UGP5 100.0 0.0 X-RAY
2015-10-28 ILE A:241 A:491 0.0 0.0 E -120.9 135.5 0.0 0.0 0.0 DC
8OG
DA
DC
NA
HOH
8.219
8.507
8.359
7.762
9.746
7.666
N
N
O
O
N
O
O3'
OP1
O3'
OP1
NA
O
4xa5 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-10 ILE A:241 A:491 0.0 0.0 E -126.8 133.2 0.0 0.0 0.0 DOC
DA
DC
8DG
MG
ACT
GOL
GOL
HOH
8.181
8.435
7.625
9.235
9.619
8.982
9.812
7.942
6.509
N
O
O
N
N
CG2
CD1
O
O
C4'
O3'
OP1
O2A
MG
CH3
O1
O2
O
4xus 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-03 ILE A:241 A:491 0.0 0.0 E -115.9 135.9 0.0 0.0 0.0 DA
DC
TTP
MG
DOC
HOH
8.249
7.533
9.178
9.340
7.951
5.637
O
O
N
N
N
O
O3'
OP1
C5'
MG
C4'
O
5cwr 1 Q9UGP5 99.69 0.0 X-RAY
2016-02-24 ILE A:242 A:491 1.0 0.006 E -122.6 130.3 1.0 0.006 0.0 DC
DCP
CA
CA
HOH
7.099
9.667
7.525
9.962
9.204
N
N
N
N
N
O3'
C5'
CA
CA
O
ILE D:242 B:491 0.0 0.0 E -125.5 134.7 NA NA NA
3mda 1 Q9UGP5 100.0 0.0 X-RAY
2010-04-28 ILE A:241 A:491 0.0 0.0 E -119.7 131.7 0.0 0.0 0.0 DA
DC
DC
CAR
MG
HOH
8.308
7.464
7.998
8.055
9.503
6.531
O
O
N
N
N
O
O3'
OP1
O3'
OP1
MG
O
3mdc 1 Q9UGP5 100.0 0.0 X-RAY
2010-04-28 ILE A:241 A:491 0.0 0.0 E -125.9 130.5 0.0 0.0 0.0 DA
DC
DC
GTF
MG
MG
HOH
8.225
7.433
7.476
8.928
7.174
9.601
6.313
O
O
N
N
N
N
O
O3'
OP1
O3'
C5'
MG
MG
O
3mgh 1 Q9UGP5 97.6 0.0 X-RAY
2010-05-19 ILE A:245 A:491 0.0 0.0 E -126.2 127.6 0.0 0.0 0.0 DC
DC
HOH
9.686
7.788
5.943
O
O
N
OP1
O3'
O
ILE E:245 C:491 0.0 0.0 E -130.3 120.7 NA NA NA
3mgi 1 Q9UGP5 97.6 0.0 X-RAY
2010-05-19 ILE A:245 A:491 1.0 0.006 E -129.6 129.6 1.0 0.006 0.0 DA
DC
DT
D3T
MG
HOH
8.267
7.321
7.808
9.534
9.735
6.834
O
O
N
N
N
N
O3'
OP1
C4'
C5'
MG
O
3pml 1 Q9UGP5 97.6 0.0 X-RAY
2011-01-26 ILE A:245 A:491 0.0 0.0 E -137.8 131.6 0.0 0.0 0.0 DA
DC
DC
1GC
MG
MG
HOH
9.954
8.288
7.245
9.283
9.470
7.505
6.864
O
O
N
N
N
N
O
O3'
OP1
O3'
C5'
MG
MG
O
ILE B:245 B:491 0.0 0.0 E -133.2 128.0 NA NA NA
3pmn 1 Q9UGP5 97.6 0.0 X-RAY
2011-02-02 ILE A:245 A:491 0.0 0.0 E -134.1 136.1 0.0 0.0 0.0 DA
DC
DG
1GC
MG
MN
HOH
9.822
9.158
7.141
9.076
9.473
7.129
5.389
O
O
N
N
N
N
N
O3'
OP1
O3'
O2A
MG
MN
O
3pnc 1 Q9UGP5 97.6 0.0 X-RAY
2011-02-02 ILE A:245 A:491 0.0 0.0 E -133.8 134.6 0.0 0.0 0.0 DG
DA
DC
1GC
MG
NA
HOH
6.710
9.111
8.057
9.096
9.472
7.184
6.433
N
O
O
N
N
N
O
O3'
O3'
OP1
O2A
MG
NA
O
3upq 1 Q9UGP5 97.6 0.0 X-RAY
2012-05-23 ILE A:245 A:491 0.0 0.0 E -128.4 137.7 0.0 0.0 0.0 DA
DC
DC
ZAN
MN
MN
HOH
9.780
8.024
7.157
9.260
9.546
7.143
2.906
O
O
N
N
N
N
O
C4'
OP1
O3'
O1A
MN
MN
O
3uq0 1 Q9UGP5 97.6 0.0 X-RAY
2012-05-23 ILE A:245 A:491 0.0 0.0 E -122.8 121.7 0.0 0.0 0.0 DC
DC
A
HOH
9.685
9.805
7.844
6.624
O
N
N
N
OP1
O3'
OP2
O
3uq2 1 Q9UGP5 97.31 0.0 X-RAY
2012-05-23 ILE A:245 A:491 0.0 0.0 E -126.8 132.0 0.0 0.0 0.0 DA
DC
C
DA
MG
HOH
8.710
7.636
7.952
8.561
9.700
7.317
O
O
N
N
N
O
O3'
OP1
O2'
OP1
MG
O
4fo6 1 Q9UGP5 97.31 0.0 X-RAY
2012-07-11 ILE A:245 A:491 0.0 0.0 E -134.7 131.1 0.0 0.0 0.0 DA
DC
C
MG
MN
F2A
HOH
8.392
7.436
7.486
9.424
7.181
9.139
6.275
O
O
N
N
N
N
O
O3'
OP1
O3'
MG
MN
O1A
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9ugp5-f1 1 Q9UGP5 100.0 0.0 ILE A:491 A:491 0.0 0.0 E -113.8 130.5