Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 103340055 . C A CCDS7513.1:NM_001174084.1:c.1313cGg>cTg_NP_001167555.1:p.438R>L Homo sapiens DNA polymerase lambda (POLL), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4xq8 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:197 B:438 150.0 0.667 S -127.1 -48.1 150.0 0.667 0.0 HOH
7.327
O
O
ARG B:197 A:438 167.0 0.742 S -123.3 -52.7 NA NA NA
5ca7 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:197 B:438 178.0 0.791 S -125.3 -40.7 178.0 0.791 0.0 HOH
3.760
N
O
ARG B:197 A:438 169.0 0.751 S -144.6 -4.6 NA NA NA
5iii 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ARG A:197 A:438 60.0 NA S -140.7 -34.7 60.0 NA NA HOH
3.488
N
O
5iij 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ARG A:197 A:438 42.0 NA S -145.0 -23.3 42.0 NA NA HOH
3.102
CB
O
5iik 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ARG A:197 A:438 70.0 NA S -139.2 -18.9 70.0 NA NA HOH
4.740
O
O
5iil 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ARG A:197 A:438 53.0 NA S -125.0 -40.2 53.0 NA NA HOH
5.738
N
O
5iim 1 Q9UGP5 100.0 0.0 X-RAY
2016-09-07 ARG A:197 A:438 66.0 NA S -141.6 -35.3 66.0 NA NA HOH
6.144
N
O
5iin 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ARG A:197 A:438 66.0 NA S -132.7 -44.5 66.0 NA NA HOH
9.064
N
O
5iio 4 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ARG M:197 A:438 164.0 0.729 S -136.2 -31.8 164.0 0.729 0.0 HOH
3.342
O
O
ARG N:197 E:438 115.0 NA S -133.9 -35.2 NA NA NA
ARG O:197 I:438 166.0 0.738 S -130.5 -30.0 NA NA NA
ARG P:197 M:438 159.0 0.707 S -132.5 -34.9 NA NA NA
1xsl 4 Q9UGP5 100.0 0.0 X-RAY
2005-01-18 ARG M:198 A:438 155.0 0.689 S -134.7 -18.0 155.0 0.689 0.0 HOH
3.390
NH1
O
ARG N:198 E:438 175.0 0.778 S -140.6 -19.2 NA NA NA
ARG O:198 I:438 170.0 0.756 S -134.4 -35.6 NA NA NA
ARG P:198 M:438 166.0 0.738 S -126.9 -28.2 NA NA NA
2bcq 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ARG D:198 A:438 41.0 NA S -149.5 -31.1 41.0 NA NA HOH
2.958
CB
O
2bcr 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ARG D:198 A:438 33.0 NA S -159.3 -35.1 33.0 NA NA HOH
3.337
O
O
2bcs 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ARG D:198 A:438 36.0 NA S -149.3 -27.3 36.0 NA NA HOH
3.634
N
O
2bcu 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ARG D:198 A:438 65.0 NA S -150.5 -27.8 65.0 NA NA HOH
3.703
N
O
2bcv 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ARG D:198 A:438 66.0 NA S -144.6 -25.8 66.0 NA NA HOH
3.639
N
O
2gws 4 Q9UGP5 100.0 0.0 X-RAY
2006-09-05 ARG M:198 A:438 46.0 NA S -142.6 -28.3 46.0 NA NA HOH
3.504
N
O
ARG N:198 E:438 176.0 0.782 S -142.8 -19.8 NA NA NA
ARG O:198 I:438 164.0 0.729 S -132.5 -40.3 NA NA NA
ARG P:198 M:438 49.0 NA S -144.8 -24.6 NA NA NA
4xrh 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:198 B:438 151.0 0.671 S -119.5 -56.2 151.0 0.671 0.0
ARG B:198 A:438 187.0 0.831 S -134.0 -24.3 NA NA NA
5ddm 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:198 B:438 161.0 0.716 S -120.4 -30.4 161.0 0.716 0.0 HOH
6.582
O
O
ARG B:198 A:438 153.0 0.68 S -124.9 -27.7 NA NA NA
5ddy 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:198 A:438 189.0 0.84 S -103.3 -40.2 189.0 0.84 0.0
ARG B:198 C:438 189.0 0.84 S -118.8 -20.1 NA NA NA
ARG C:198 E:438 178.0 0.791 S -126.8 -29.1 NA NA NA
ARG D:198 G:438 220.0 0.978 S -65.4 -43.3 NA NA NA
3c5g 1 Q9UGP5 99.7 0.0 X-RAY
2008-07-29 ARG A:198 A:438 171.0 0.76 S -143.4 -30.8 171.0 0.76 0.0 HOH
3.191
O
O
ARG E:198 B:438 161.0 0.716 S -148.0 -30.1 NA NA NA
5chg 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 ARG A:197 A:438 166.0 0.738 S -127.4 -40.7 166.0 0.738 0.0
ARG B:197 B:438 158.0 0.702 S -137.5 -26.3 NA NA NA
5cj7 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 ARG A:197 A:438 150.0 0.667 S -135.1 -25.4 150.0 0.667 0.0
ARG B:197 B:438 184.0 0.818 S -124.4 -39.2 NA NA NA
5cp2 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 ARG A:197 A:438 150.0 0.667 S -124.1 -14.4 150.0 0.667 0.0 HOH
3.889
N
O
ARG B:197 B:438 169.0 0.751 S -134.9 -35.2 NA NA NA
5cr0 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 ARG A:197 A:438 156.0 0.693 S -130.4 -35.4 156.0 0.693 0.0
ARG B:197 B:438 167.0 0.742 S -126.9 -28.9 NA NA NA
3c5f 4 Q9UGP5 99.7 0.0 X-RAY
2008-09-02 ARG G:198 A:438 31.0 NA S -140.8 -34.3 31.0 NA NA HOH
3.464
N
O
ARG H:198 B:438 146.0 0.649 S -141.7 -25.0 NA NA NA
1xsn 4 Q9UGP5 99.7 0.0 X-RAY
2005-01-18 ARG D:198 A:438 64.0 NA S -153.1 -37.8 64.0 NA NA HOH
4.581
N
O
1xsp 4 Q9UGP5 99.7 0.0 X-RAY
2005-01-18 ARG D:198 A:438 43.0 NA S -146.5 -31.9 43.0 NA NA HOH
3.751
N
O
2pfn 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 ARG D:198 A:438 62.0 NA S -152.1 -27.4 62.0 NA NA HOH
3.467
N
O
2pfo 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 ARG D:198 A:438 63.0 NA S -151.5 -31.6 63.0 NA NA HOH
3.348
N
O
2pfp 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 ARG D:198 A:438 65.0 NA S -148.6 -26.0 65.0 NA NA HOH
3.695
N
O
2pfq 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 ARG D:198 A:438 145.0 0.644 S -150.3 -36.2 145.0 0.644 0.0 HOH
2.753
NH2
O
3hw8 1 Q9UGP5 99.7 0.0 X-RAY
2009-08-25 ARG A:198 A:438 58.0 NA S -156.4 -28.6 58.0 NA NA HOH
3.430
N
O
3hwt 1 Q9UGP5 99.7 0.0 X-RAY
2009-08-25 ARG A:198 A:438 61.0 NA S -151.7 -34.4 61.0 NA NA HOH
3.586
N
O
1rzt 4 Q9UGP5 100.0 0.0 X-RAY
2004-03-02 ARG M:194 A:438 49.0 NA S -137.6 -24.9 49.0 NA NA HOH
3.522
N
O
ARG N:194 E:438 182.0 0.809 S -138.1 -37.0 NA NA NA
ARG O:194 I:438 50.0 NA S -140.7 -29.6 NA NA NA
ARG P:194 M:438 46.0 NA S -138.2 -28.1 NA NA NA
4k4g 1 Q9UGP5 100.0 0.0 X-RAY
2014-07-16 ARG A:195 A:438 144.0 0.64 S -135.9 -30.6 144.0 0.64 0.0 HOH
3.606
N
O
ARG E:195 E:438 152.0 0.676 S -138.3 -30.1 NA NA NA
ARG I:195 I:438 177.0 0.787 S -142.2 -31.3 NA NA NA
ARG M:195 M:438 153.0 0.68 S -144.3 -16.8 NA NA NA
4k4h 1 Q9UGP5 100.0 0.0 X-RAY
2014-07-16 ARG A:195 A:438 155.0 0.689 S -137.7 -43.3 155.0 0.689 0.0 HOH
3.411
N
O
ARG E:195 E:438 148.0 0.658 S -142.7 -38.5 NA NA NA
ARG I:195 I:438 193.0 0.858 S -146.9 -44.8 NA NA NA
ARG M:195 M:438 162.0 0.72 S -143.2 -20.9 NA NA NA
4k4i 1 Q9UGP5 100.0 0.0 X-RAY
2014-07-16 ARG A:195 A:438 151.0 0.671 S -129.1 -37.3 151.0 0.671 0.0 HOH
3.677
N
O
ARG E:195 E:438 159.0 0.707 S -145.4 -30.7 NA NA NA
ARG I:195 I:438 193.0 0.858 S -146.6 -17.2 NA NA NA
ARG M:195 M:438 144.0 0.64 S -146.6 -19.7 NA NA NA
3hx0 1 Q9UGP5 98.8 0.0 X-RAY
2009-08-25 ARG A:198 A:438 175.0 0.778 S -163.9 -37.0 175.0 0.778 0.0
ARG E:198 F:438 45.0 NA S -146.3 -34.9 NA NA NA
ARG I:198 K:438 47.0 NA S -150.9 -35.5 NA NA NA
ARG M:198 P:438 42.0 NA S -159.6 -26.2 NA NA NA
5dkw 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:190 A:438 172.0 0.764 S -133.2 -25.8 172.0 0.764 0.0 HOH
3.969
N
O
ARG B:190 B:438 167.0 0.742 S -138.6 -18.0 NA NA NA
5cb1 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:189 A:438 202.0 0.898 S -108.9 -32.9 202.0 0.898 0.0
ARG B:189 B:438 184.0 0.818 S -134.8 -16.8 NA NA NA
4x5v 1 Q9UGP5 100.0 0.0 X-RAY
2015-10-28 ARG A:188 A:438 111.0 NA S -89.7 66.2 111.0 NA NA HOH
5.374
CA
O
4xa5 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-10 ARG A:188 A:438 59.0 NA S -135.5 -42.3 59.0 NA NA ACT
GOL
HOH
7.349
9.286
3.369
O
O
N
O
O1
O
4xus 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-03 ARG A:188 A:438 71.0 NA S -140.8 -26.4 71.0 NA NA HOH
3.998
N
O
5cwr 1 Q9UGP5 99.69 0.0 X-RAY
2016-02-24 ARG A:189 A:438 26.0 NA S -127.0 -41.6 26.0 NA NA HOH
4.097
N
O
ARG D:189 B:438 135.0 0.6 S -127.9 -45.6 NA NA NA
3mda 1 Q9UGP5 100.0 0.0 X-RAY
2010-04-28 ARG A:188 A:438 43.0 NA S -140.4 -23.9 43.0 NA NA HOH
3.803
N
O
3mdc 1 Q9UGP5 100.0 0.0 X-RAY
2010-04-28 ARG A:188 A:438 35.0 NA S -152.9 -24.2 35.0 NA NA HOH
3.454
N
O
3mgh 1 Q9UGP5 97.6 0.0 X-RAY
2010-05-19 ARG A:197 A:438 52.0 NA S -169.4 59.9 52.0 NA NA HOH
4.982
CB
O
ARG E:197 C:438 38.0 NA S -142.4 -39.5 NA NA NA
3mgi 1 Q9UGP5 97.6 0.0 X-RAY
2010-05-19 ARG A:197 A:438 55.0 NA S -153.5 -18.1 55.0 NA NA HOH
5.694
N
O
3pml 1 Q9UGP5 97.6 0.0 X-RAY
2011-01-26 ARG A:197 A:438 51.0 NA S -133.0 -30.4 51.0 NA NA HOH
4.663
N
O
ARG B:197 B:438 54.0 NA S -152.1 -41.7 NA NA NA
3pmn 1 Q9UGP5 97.6 0.0 X-RAY
2011-02-02 ARG A:197 A:438 39.0 NA S -146.9 -19.6 39.0 NA NA HOH
3.605
N
O
3pnc 1 Q9UGP5 97.6 0.0 X-RAY
2011-02-02 ARG A:197 A:438 57.0 NA S -151.9 -30.7 57.0 NA NA HOH
3.439
N
O
3upq 1 Q9UGP5 97.6 0.0 X-RAY
2012-05-23 ARG A:197 A:438 41.0 NA S -134.8 -34.0 41.0 NA NA SO4
SO4
HOH
8.437
6.564
3.471
O
CA
N
O1
O2
O
3uq0 1 Q9UGP5 97.6 0.0 X-RAY
2012-05-23 ARG A:197 A:438 36.0 NA S -134.7 -41.7 36.0 NA NA SO4
SO4
HOH
8.954
6.348
3.550
O
O
N
O2
O3
O
3uq2 1 Q9UGP5 97.31 0.0 X-RAY
2012-05-23 ARG A:197 A:438 85.0 NA -101.3 -3.4 85.0 NA NA HOH
4.233
N
O
4fo6 1 Q9UGP5 97.31 0.0 X-RAY
2012-07-11 ARG A:197 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9ugp5-f1 1 Q9UGP5 100.0 0.0 ARG A:438 A:438 187.0 0.831 S -128.8 -43.4