Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 103343407 . C A CCDS7513.1:NM_001174084.1:c.923cGg>cTg_NP_001167555.1:p.308R>L Homo sapiens DNA polymerase lambda (POLL), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4xq8 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:67 NA:NA DO NA DO DO DO NA NA NA
ARG B:67 NA:NA DO NA DO DO DO NA NA NA
5ca7 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:67 NA:NA DO NA DO DO DO NA NA NA
ARG B:67 NA:NA DO NA DO DO DO NA NA NA
5iii 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ARG A:67 A:308 157.0 0.698 H -63.1 -45.4 157.0 0.698 0.0 DG
DC
DC
DG
DG
HOH
2.327
3.655
7.914
9.583
9.725
6.009
NH2
N
N
NH1
NH1
CD
OP2
OP1
OP2
O6
O6
O
5iij 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ARG A:67 A:308 157.0 0.698 H -76.4 -40.4 157.0 0.698 0.0 DG
DC
DC
HOH
2.791
3.653
7.861
3.062
NH1
N
N
O
OP2
OP1
OP2
O
5iik 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ARG A:67 A:308 175.0 0.778 H -63.2 -45.0 175.0 0.778 0.0 DG
DC
DC
HOH
2.298
3.634
8.037
4.699
NH1
CB
N
CD
OP2
OP2
OP2
O
5iil 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ARG A:67 A:308 168.0 0.747 H -61.9 -43.5 168.0 0.747 0.0 DG
DC
DC
HOH
2.470
3.459
8.007
2.664
NH2
CB
N
O
OP2
OP2
OP2
O
5iim 1 Q9UGP5 100.0 0.0 X-RAY
2016-09-07 ARG A:67 A:308 157.0 0.698 H -64.0 -48.4 157.0 0.698 0.0 DG
DC
DC
HOH
2.664
3.478
8.039
3.936
NH2
CB
N
CG
OP3
OP2
OP2
O
5iin 1 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ARG A:67 A:308 169.0 0.751 H -61.2 -37.4 169.0 0.751 0.0 DG
DC
DC
HOH
2.636
3.656
8.368
6.951
NH1
CB
N
CD
OP2
OP2
OP2
O
5iio 4 Q9UGP5 100.0 0.0 X-RAY
2016-08-17 ARG M:67 A:308 175.0 0.778 H -66.7 -40.2 175.0 0.778 0.0 DC
DG
DG
DC
DG
DC
DC
DG
NA
HOH
7.163
7.184
7.702
9.544
3.561
3.197
6.154
8.593
9.296
3.052
NH2
NH2
NH2
NH2
NE
NE
NH2
NH2
N
N
N4
O6
O6
N4
C5'
OP2
N4
O6
NA
O
ARG N:67 E:308 157.0 0.698 H -65.0 -48.1 NA NA NA
ARG O:67 I:308 182.0 0.809 H -59.0 -47.4 NA NA NA
ARG P:67 M:308 159.0 0.707 H -60.9 -43.9 NA NA NA
1xsl 4 Q9UGP5 100.0 0.0 X-RAY
2005-01-18 ARG M:68 A:308 165.0 0.733 H -62.4 -37.9 165.0 0.733 0.0 DC
DG
DC
DC
MG
CAC
HOH
9.625
2.712
3.850
8.128
9.948
8.697
3.026
CD
NH2
N
N
NE
CD
N
N4
OP2
OP1
OP2
MG
C2
O
ARG N:68 E:308 193.0 0.858 H -50.9 -52.1 NA NA NA
ARG O:68 I:308 158.0 0.702 H -53.8 -40.8 NA NA NA
ARG P:68 M:308 180.0 0.8 H -55.1 -55.8 NA NA NA
2bcq 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ARG D:68 A:308 157.0 0.698 H -56.9 -49.6 157.0 0.698 0.0 DG
DC
DC
HOH
2.567
3.290
7.936
3.112
NH2
CB
N
N
OP3
OP2
OP2
O
2bcr 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ARG D:68 A:308 190.0 0.844 H -58.9 -45.7 190.0 0.844 0.0 DG
DC
DC
DG
DC
DG
NA
HOH
3.049
3.903
7.214
9.638
9.608
9.243
9.187
2.781
CD
N
NH1
NH1
NH2
NH1
N
NH1
OP2
OP1
N4
O6
N4
O6
NA
O
2bcs 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ARG D:68 A:308 188.0 0.836 H -43.1 -53.9 188.0 0.836 0.0 DG
DC
DC
HOH
3.670
3.010
8.130
5.650
CB
CG
N
CG
C5'
OP2
OP2
O
2bcu 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ARG D:68 A:308 197.0 0.876 H -63.0 -46.0 197.0 0.876 0.0 DG
DC
DC
DG
HOH
2.699
3.524
7.752
9.440
4.461
NH1
CD
CD
NE
CZ
OP3
OP2
N4
O6
O
2bcv 4 Q9UGP5 100.0 0.0 X-RAY
2006-03-07 ARG D:68 A:308 147.0 0.653 H -54.8 -52.5 147.0 0.653 0.0 DG
DC
DC
DG
HOH
2.610
3.355
8.008
9.900
2.969
NH2
CG
N
NH1
CG
OP3
OP2
OP2
O6
O
2gws 4 Q9UGP5 100.0 0.0 X-RAY
2006-09-05 ARG M:68 A:308 161.0 0.716 H -56.8 -49.4 161.0 0.716 0.0 DG
DC
DC
NA
CAC
HOH
2.718
3.614
8.104
9.882
8.851
2.993
NH2
CB
N
NH2
N
CG
OP2
OP2
OP2
NA
C2
O
ARG N:68 E:308 183.0 0.813 H -54.9 -46.9 NA NA NA
ARG O:68 I:308 205.0 0.911 H -54.7 -50.1 NA NA NA
ARG P:68 M:308 183.0 0.813 H -58.0 -49.7 NA NA NA
4xrh 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:68 NA:NA DO NA DO DO DO NA NA NA
ARG B:68 NA:NA DO NA DO DO DO NA NA NA
5ddm 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:68 NA:NA DO NA DO DO DO NA NA NA
ARG B:68 NA:NA DO NA DO DO DO NA NA NA
5ddy 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:68 A:308 108.0 0.48 T -102.6 -17.6 108.0 0.48 0.0 MG
DCP
HOH
9.830
5.564
7.640
CD
CD
O
MG
O3G
O
ARG B:68 C:308 95.0 0.422 T -119.5 -32.8 NA NA NA
ARG C:68 NA:NA DO NA DO DO DO NA NA NA
ARG D:68 NA:NA DO NA DO DO DO NA NA NA
3c5g 1 Q9UGP5 99.7 0.0 X-RAY
2008-07-29 ARG A:68 A:308 155.0 0.689 H -56.3 -50.9 155.0 0.689 0.0 DG
DC
DC
NA
EDO
HOH
2.798
3.442
8.181
9.478
9.784
2.745
NH2
CB
N
N
NH1
NH2
OP3
OP2
OP2
NA
O1
O
ARG E:68 B:308 161.0 0.716 H -61.8 -49.5 NA NA NA
5chg 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 ARG A:67 NA:NA DO NA DO DO DO NA NA NA
ARG B:67 NA:NA DO NA DO DO DO NA NA NA
5cj7 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 ARG A:67 NA:NA DO NA DO DO DO NA NA NA
ARG B:67 NA:NA DO NA DO DO DO NA NA NA
5cp2 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 ARG A:67 NA:NA DO NA DO DO DO NA NA NA
ARG B:67 NA:NA DO NA DO DO DO NA NA NA
5cr0 1 Q9UGP5 99.7 0.0 X-RAY
2016-02-24 ARG A:67 NA:NA DO NA DO DO DO NA NA NA
ARG B:67 NA:NA DO NA DO DO DO NA NA NA
3c5f 4 Q9UGP5 99.7 0.0 X-RAY
2008-09-02 ARG G:68 A:308 154.0 0.684 H -58.0 -50.0 154.0 0.684 0.0 DC
DG
DG
DC
DC
NA
HOH
9.777
9.947
2.877
3.382
7.967
8.973
3.040
NH1
NH1
NH2
CG
N
N
O
N4
O6
OP2
OP2
OP2
NA
O
ARG H:68 B:308 151.0 0.671 H -57.7 -47.1 NA NA NA
1xsn 4 Q9UGP5 99.7 0.0 X-RAY
2005-01-18 ARG D:68 A:308 191.0 0.849 H -67.0 -43.4 191.0 0.849 0.0 DC
DG
DG
DC
DC
EDO
HOH
9.942
9.094
2.771
3.400
7.732
5.743
3.673
NH1
NH1
NE
CG
NH1
NH1
NH1
N4
O6
OP3
OP2
N4
O2
O
1xsp 4 Q9UGP5 99.7 0.0 X-RAY
2005-01-18 ARG D:68 A:308 205.0 0.911 H -51.9 -46.6 205.0 0.911 0.0 DC
DG
DG
DC
DC
NA
HOH
9.818
9.290
2.797
3.384
8.160
5.745
3.577
NH2
NH2
NH1
CB
N
NH1
NH1
N4
O6
OP2
OP2
OP2
NA
O
2pfn 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 ARG D:68 A:308 150.0 0.667 H -46.8 -56.1 150.0 0.667 0.0 DG
DG
DC
DC
HOH
9.970
2.449
3.111
7.935
4.422
NH1
NH2
CG
N
NH2
O6
OP3
OP2
OP2
O
2pfo 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 ARG D:68 A:308 148.0 0.658 H -49.4 -48.0 148.0 0.658 0.0 DG
DC
DC
HOH
2.640
3.387
8.017
5.553
NH2
CG
N
N
OP3
OP2
OP2
O
2pfp 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 ARG D:68 A:308 183.0 0.813 H -56.2 -48.8 183.0 0.813 0.0 DG
DG
DC
DC
NA
HOH
9.343
2.573
3.377
7.573
3.614
2.896
CD
NH2
CD
CD
NH2
CD
O6
OP3
OP2
N4
NA
O
2pfq 4 Q9UGP5 99.7 0.0 X-RAY
2007-05-15 ARG D:68 A:308 160.0 0.711 H -54.8 -39.1 160.0 0.711 0.0 DG
DC
DC
HOH
3.291
3.514
7.988
2.479
NH1
CB
N
O
OP2
OP2
OP2
O
3hw8 1 Q9UGP5 99.7 0.0 X-RAY
2009-08-25 ARG A:68 A:308 207.0 0.92 H -48.3 -61.8 207.0 0.92 0.0 DG
DC
DC
NA
HOH
3.572
3.085
7.676
9.258
3.409
CB
CB
N
N
N
O3'
OP2
OP2
NA
O
3hwt 1 Q9UGP5 99.7 0.0 X-RAY
2009-08-25 ARG A:68 A:308 214.0 0.951 H -46.6 -59.6 214.0 0.951 0.0 DC
DG
DG
DC
DC
HOH
9.772
9.427
2.810
3.069
7.891
2.954
NH2
NH2
CD
CB
N
CG
N4
O6
OP3
OP2
OP2
O
1rzt 4 Q9UGP5 100.0 0.0 X-RAY
2004-03-02 ARG M:64 A:308 169.0 0.751 H -57.4 -45.7 169.0 0.751 0.0 DG
DC
DC
HOH
2.682
3.586
8.100
2.738
NH2
CB
N
O
OP3
OP2
OP2
O
ARG N:64 E:308 184.0 0.818 H -52.8 -47.1 NA NA NA
ARG O:64 I:308 175.0 0.778 H -57.9 -45.8 NA NA NA
ARG P:64 M:308 175.0 0.778 H -61.7 -42.8 NA NA NA
4k4g 1 Q9UGP5 100.0 0.0 X-RAY
2014-07-16 ARG A:65 A:308 147.0 0.653 H -61.6 -40.3 147.0 0.653 0.0 DG
DC
DC
CA
CA
HOH
2.653
3.633
8.740
9.458
9.741
8.207
NE
N
N
N
CD
O
OP3
OP1
OP2
CA
CA
O
ARG E:65 E:308 147.0 0.653 H -78.2 -33.8 NA NA NA
ARG I:65 I:308 163.0 0.724 H -76.5 -44.8 NA NA NA
ARG M:65 M:308 145.0 0.644 H -62.3 -49.6 NA NA NA
4k4h 1 Q9UGP5 100.0 0.0 X-RAY
2014-07-16 ARG A:65 A:308 141.0 0.627 H -60.4 -39.0 141.0 0.627 0.0 DG
DC
DC
CA
CA
HOH
2.820
3.588
8.438
9.474
9.500
8.258
NE
N
N
N
CD
O
OP3
OP1
OP2
CA
CA
O
ARG E:65 E:308 155.0 0.689 H -72.6 -41.3 NA NA NA
ARG I:65 I:308 167.0 0.742 H -75.7 -44.4 NA NA NA
ARG M:65 M:308 163.0 0.724 H -68.8 -49.6 NA NA NA
4k4i 1 Q9UGP5 100.0 0.0 X-RAY
2014-07-16 ARG A:65 A:308 145.0 0.644 H -52.9 -43.2 145.0 0.644 0.0 DG
DC
DC
CA
CA
HOH
3.026
3.678
8.756
9.491
9.764
8.490
NE
N
N
N
CD
CD
OP3
OP1
OP2
CA
CA
O
ARG E:65 E:308 155.0 0.689 H -74.8 -37.7 NA NA NA
ARG I:65 I:308 177.0 0.787 H -72.9 -45.7 NA NA NA
ARG M:65 M:308 138.0 0.613 H -54.0 -54.6 NA NA NA
3hx0 1 Q9UGP5 98.8 0.0 X-RAY
2009-08-25 ARG A:68 A:308 187.0 0.831 H -46.4 -50.2 187.0 0.831 0.0 DG
DC
DC
2.862
3.656
8.328
NH2
CG
N
OP3
OP2
OP2
ARG E:68 F:308 201.0 0.893 H -54.8 -54.3 NA NA NA
ARG I:68 K:308 174.0 0.773 H -73.7 -31.5 NA NA NA
ARG M:68 P:308 161.0 0.716 H -52.5 -52.5 NA NA NA
5dkw 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:60 A:308 164.0 0.729 H -62.6 -37.2 164.0 0.729 0.0 DG
DC
DC
CA
HOH
3.034
3.539
8.216
9.224
6.658
NE
CB
N
N
N
OP1
OP2
OP2
CA
O
ARG B:60 B:308 178.0 0.791 H -63.6 -34.9 NA NA NA
5cb1 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-24 ARG A:59 A:308 101.0 0.449 H -60.2 -34.9 101.0 0.449 0.0
ARG B:59 NA:NA DO NA DO DO DO NA NA NA
4x5v 1 Q9UGP5 100.0 0.0 X-RAY
2015-10-28 ARG A:58 A:308 178.0 0.791 H -68.1 -37.2 178.0 0.791 0.0 DG
DC
DC
DG
DC
DG
DG
DC
HOH
2.231
3.269
5.541
9.445
8.765
7.136
7.985
9.550
3.810
NH1
NH2
NH2
NH2
NH2
NH2
NH2
NH2
NH2
OP2
OP2
N4
O6
N4
O6
O6
N3
O
4xa5 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-10 ARG A:58 A:308 152.0 0.676 H -71.7 -39.5 152.0 0.676 0.0 DG
DC
DC
HOH
2.161
3.485
7.706
2.497
NH1
CG
N
NH1
OP3
OP2
OP2
O
4xus 1 Q9UGP5 100.0 0.0 X-RAY
2016-02-03 ARG A:58 A:308 165.0 0.733 H -58.9 -40.4 165.0 0.733 0.0 DG
DC
DC
DG
DC
DG
DG
DC
HOH
3.415
3.121
5.516
9.417
8.797
7.053
7.738
9.732
2.791
CZ
NE
NH2
NH2
NH2
NH2
NH2
NH2
N
C5'
OP2
N4
O6
N4
O6
O6
N3
O
5cwr 1 Q9UGP5 99.69 0.0 X-RAY
2016-02-24 ARG A:59 A:308 154.0 0.684 H -63.6 -36.1 154.0 0.684 0.0 DG
DC
DC
HOH
3.077
3.634
8.229
2.757
NH1
N
N
NE
OP1
OP1
OP2
O
ARG D:59 B:308 166.0 0.738 H -58.3 -56.6 NA NA NA
3mda 1 Q9UGP5 100.0 0.0 X-RAY
2010-04-28 ARG A:58 A:308 152.0 0.676 H -46.0 -53.5 152.0 0.676 0.0 DG
DC
DC
HOH
2.551
3.195
8.126
2.652
NH2
CB
N
NH1
OP3
OP2
OP2
O
3mdc 1 Q9UGP5 100.0 0.0 X-RAY
2010-04-28 ARG A:58 A:308 130.0 0.578 H -60.8 -51.0 130.0 0.578 0.0 DG
DC
DC
NA
HOH
2.540
3.564
7.868
8.793
2.976
NH2
CB
N
N
N
OP2
OP2
OP2
NA
O
3mgh 1 Q9UGP5 97.6 0.0 X-RAY
2010-05-19 ARG A:67 A:308 178.0 0.791 H -57.8 -38.2 178.0 0.791 0.0 DG
DC
DC
HOH
3.017
3.728
7.989
2.972
NE
CB
N
N
OP3
OP2
OP2
O
ARG E:67 C:308 158.0 0.702 H -70.9 -34.7 NA NA NA
3mgi 1 Q9UGP5 97.6 0.0 X-RAY
2010-05-19 ARG A:67 A:308 151.0 0.671 H -50.3 -49.6 151.0 0.671 0.0 DG
DC
DC
HOH
2.610
3.303
8.144
2.956
NH2
CG
N
N
OP3
OP2
OP2
O
3pml 1 Q9UGP5 97.6 0.0 X-RAY
2011-01-26 ARG A:67 A:308 166.0 0.738 H -47.4 -58.2 166.0 0.738 0.0 DG
DC
DC
HOH
2.841
3.454
7.951
8.644
NH1
CB
N
N
OP1
OP2
OP2
O
ARG B:67 B:308 153.0 0.68 H -54.2 -56.3 NA NA NA
3pmn 1 Q9UGP5 97.6 0.0 X-RAY
2011-02-02 ARG A:67 A:308 153.0 0.68 H -54.9 -39.6 153.0 0.68 0.0 DG
DC
DC
NA
HOH
2.611
3.754
8.170
8.923
2.426
NH1
CB
N
N
O
O5'
OP2
OP2
NA
O
3pnc 1 Q9UGP5 97.6 0.0 X-RAY
2011-02-02 ARG A:67 A:308 203.0 0.902 H -54.9 -40.6 203.0 0.902 0.0 DC
DG
DG
DG
DC
DC
DG
HOH
8.303
7.467
9.032
4.046
3.568
6.106
8.903
2.583
NH1
NH1
NH1
CD
CD
NH1
NH1
NH1
N4
O6
O6
C5'
OP2
N4
O6
O
3upq 1 Q9UGP5 97.6 0.0 X-RAY
2012-05-23 ARG A:67 A:308 112.0 NA H -72.1 -47.9 112.0 NA NA DG
DC
DC
HOH
3.755
3.452
7.717
5.358
CB
CG
N
N
O5'
OP2
OP2
O
3uq0 1 Q9UGP5 97.6 0.0 X-RAY
2012-05-23 ARG A:67 A:308 118.0 NA H -68.9 -35.9 118.0 NA NA DG
DG
DC
DC
CL
HOH
9.735
3.793
3.522
7.863
9.634
3.401
CD
CD
N
N
CD
CD
O6
C5'
OP1
OP2
CL
O
3uq2 1 Q9UGP5 97.31 0.0 X-RAY
2012-05-23 ARG A:67 A:308 157.0 0.698 H -63.1 -42.6 157.0 0.698 0.0 DG
DC
DC
HOH
2.633
3.400
7.797
5.343
NH2
CB
N
CD
OP3
OP2
OP2
O
4fo6 1 Q9UGP5 97.31 0.0 X-RAY
2012-07-11 ARG A:67 A:308 164.0 0.729 H -59.6 -47.7 164.0 0.729 0.0 DG
DC
DC
NA
HOH
2.704
3.395
7.993
9.358
5.155
NH2
CG
N
N
N
OP3
OP2
OP2
NA
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9ugp5-f1 1 Q9UGP5 100.0 0.0 ARG A:308 A:308 197.0 0.876 H -65.4 -24.7