Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 106014705 | . | A | C | CCDS7555.1:NM_004832.2:c.19Agg>Cgg_NP_004823.1:p.7R>R | Homo sapiens glutathione S-transferase omega 1 (GSTO1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
4yqm | 1 | P78417 | 100.0 | 0.0 |
X-RAY |
2016-10-12 | ARG | A:10 | A:7 | 141.0 | 0.627 | -58.3 | 136.5 | 141.0 | 0.627 | 0.0 | |||||||
ARG | B:10 | B:7 | 146.0 | 0.649 | S | -67.4 | 140.7 | NA | NA | NA | |||||||||||||
ARG | C:10 | C:7 | 131.0 | 0.582 | S | -64.2 | 134.8 | NA | NA | NA | |||||||||||||
4yqu | 1 | P78417 | 100.0 | 0.0 |
X-RAY |
2016-10-12 | ARG | A:10 | A:7 | 113.0 | 0.502 | S | -58.1 | 133.9 | 113.0 | 0.502 | 0.0 |
HOH |
2.710 |
O |
O |
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ARG | B:10 | B:7 | 117.0 | 0.52 | S | -53.4 | 134.6 | 117.0 | 0.52 | 0.0 |
HOH |
3.033 |
NE |
O |
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4yqv | 1 | P78417 | 100.0 | 0.0 |
X-RAY |
2016-10-12 | ARG | A:10 | A:7 | 153.0 | 0.68 | S | -62.1 | 131.7 | 153.0 | 0.68 | 0.0 |
HOH |
2.735 |
O |
O |
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ARG | B:10 | B:7 | 140.0 | 0.622 | -57.7 | 132.6 | NA | NA | NA | ||||||||||||||
ARG | C:10 | C:7 | 140.0 | 0.622 | S | -61.4 | 132.3 | NA | NA | NA | |||||||||||||
6mhb | 1 | P78417 | 100.0 | 0.0 |
X-RAY |
2019-02-20 | ARG | A:10 | A:7 | 166.0 | 0.738 | -63.3 | 127.1 | 166.0 | 0.738 | 0.0 |
HOH |
7.014 |
N |
O |
|||
ARG | B:10 | B:7 | 153.0 | 0.68 | -66.3 | 142.7 | NA | NA | NA | ||||||||||||||
ARG | C:10 | C:7 | 182.0 | 0.809 | -59.1 | 129.2 | 182.0 | 0.809 | 0.0 |
HOH |
5.821 |
C |
O |
||||||||||
ARG | D:10 | D:7 | 77.0 | NA | -56.9 | 127.4 | NA | NA | NA | ||||||||||||||
ARG | E:10 | E:7 | 77.0 | NA | -62.0 | 131.1 | NA | NA | NA | ||||||||||||||
ARG | F:10 | F:7 | 148.0 | 0.658 | -60.8 | 132.5 | NA | NA | NA | ||||||||||||||
6mhc | 1 | P78417 | 100.0 | 0.0 |
X-RAY |
2019-02-20 | ARG | A:10 | A:7 | 153.0 | 0.68 | -67.7 | 139.5 | 153.0 | 0.68 | 0.0 |
HOH |
2.726 |
O |
O |
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ARG | B:10 | B:7 | 156.0 | 0.693 | -63.2 | 140.6 | 156.0 | 0.693 | 0.0 |
HOH |
2.696 |
NH2 |
O |
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6mhd | 1 | P78417 | 100.0 | 0.0 |
X-RAY |
2019-02-20 | ARG | A:10 | A:7 | 138.0 | 0.613 | -58.7 | 135.6 | 138.0 | 0.613 | 0.0 |
HOH |
2.785 |
NE |
O |
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ARG | B:10 | B:7 | 149.0 | 0.662 | -68.0 | 134.3 | 149.0 | 0.662 | 0.0 |
HOH |
2.835 |
O |
O |
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1eem | 1 | P78417 | 100.0 | 0.0 |
X-RAY |
2000-08-11 | ARG | A:7 | A:7 | 147.0 | 0.653 | -56.6 | 137.7 | 147.0 | 0.653 | 0.0 |
HOH |
2.652 |
O |
O |
|||
5v3q | 1 | P78417 | 100.0 | 0.0 |
X-RAY |
2017-12-20 | ARG | A:7 | A:7 | 109.0 | 0.484 | -51.8 | 139.7 | 109.0 | 0.484 | 0.0 |
HOH |
2.773 |
O |
O |
|||
5yvn | 1 | P78417 | 100.0 | 0.0 |
X-RAY |
2018-11-28 | ARG | A:7 | A:7 | 121.0 | 0.538 | -53.2 | 137.9 | 121.0 | 0.538 | 0.0 |
SO4 HOH |
7.362 2.699 |
N NH2 |
O2 O |
|||
5yvo | 1 | P78417 | 100.0 | 0.0 |
X-RAY |
2018-11-28 | ARG | A:7 | A:7 | 123.0 | 0.547 | -53.6 | 142.7 | 123.0 | 0.547 | 0.0 |
SO4 HOH |
7.306 2.603 |
N NH2 |
O1 O |
|||
5ueh | 1 | P78417 | 100.0 | 0.0 |
X-RAY |
2018-01-17 | ARG | A:8 | A:7 | 106.0 | 0.471 | -55.5 | 144.0 | 106.0 | 0.471 | 0.0 |
SO4 HOH |
7.139 2.849 |
N O |
O1 O |
|||
6pnm | 1 | P78417 | 100.0 | 3e-180 |
X-RAY |
2019-07-24 | ARG | A:6 | A:7 | 118.0 | 0.524 | -57.7 | 140.6 | 118.0 | 0.524 | 0.0 |
SO4 HOH |
7.353 2.815 |
N O |
O2 O |
|||
6pnn | 1 | P78417 | 100.0 | 3e-180 |
X-RAY |
2019-07-24 | ARG | A:6 | A:7 | 126.0 | 0.56 | -50.8 | 140.0 | 126.0 | 0.56 | 0.0 |
HOH |
2.658 |
O |
O |
|||
6pno | 1 | P78417 | 100.0 | 3e-180 |
X-RAY |
2019-07-24 | ARG | A:6 | A:7 | 115.0 | 0.511 | -54.0 | 138.9 | 115.0 | 0.511 | 0.0 |
SO4 HOH |
7.355 2.795 |
N NH1 |
O1 O |
|||
3vln | 1 | P78417 | 99.59 | 5e-180 |
X-RAY |
2012-05-16 | ARG | A:7 | A:7 | 111.0 | 0.493 | -53.4 | 139.3 | 111.0 | 0.493 | 0.0 |
GOL HOH |
7.203 2.595 |
N NH1 |
O2 O |
|||
4is0 | 1 | P78417 | 99.59 | 5e-180 |
X-RAY |
2013-04-24 | ARG | A:7 | A:7 | 124.0 | 0.551 | -56.0 | 140.5 | 124.0 | 0.551 | 0.0 |
HOH |
2.833 |
O |
O |
|||
3lfl | 1 | P78417 | 99.59 | 1e-178 |
X-RAY |
2010-11-24 | ARG | A:7 | A:7 | 107.0 | 0.476 | -58.1 | 137.4 | 107.0 | 0.476 | 0.0 |
HOH |
2.565 |
O |
O |
|||
ARG | B:7 | B:7 | 236.0 | 1.0 | -66.7 | 143.8 | NA | NA | NA | ||||||||||||||
ARG | C:7 | C:7 | 178.0 | 0.791 | 108.0 | 149.1 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p78417-f1 | 1 | P78417 | 100.0 | 0.0 | ARG | A:7 | A:7 | 189.0 | 0.84 | -57.4 | 141.9 |