Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 106014706 . G A CCDS7555.1:NM_004832.2:c.20aGg>aAg_NP_004823.1:p.7R>K Homo sapiens glutathione S-transferase omega 1 (GSTO1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4yqm 1 P78417 100.0 0.0 X-RAY
 2016-10-12 ARG A:10 A:7 141.0 0.627 -58.3 136.5 141.0 0.627 0.0
ARG B:10 B:7 146.0 0.649 S -67.4 140.7 NA NA NA
ARG C:10 C:7 131.0 0.582 S -64.2 134.8 NA NA NA
4yqu 1 P78417 100.0 0.0 X-RAY
 2016-10-12 ARG A:10 A:7 113.0 0.502 S -58.1 133.9 113.0 0.502 0.0 HOH
 2.710
 O
 O
ARG B:10 B:7 117.0 0.52 S -53.4 134.6 117.0 0.52 0.0 HOH
 3.033
 NE
 O
4yqv 1 P78417 100.0 0.0 X-RAY
 2016-10-12 ARG A:10 A:7 153.0 0.68 S -62.1 131.7 153.0 0.68 0.0 HOH
 2.735
 O
 O
ARG B:10 B:7 140.0 0.622 -57.7 132.6 NA NA NA
ARG C:10 C:7 140.0 0.622 S -61.4 132.3 NA NA NA
6mhb 1 P78417 100.0 0.0 X-RAY
 2019-02-20 ARG A:10 A:7 166.0 0.738 -63.3 127.1 166.0 0.738 0.0 HOH
 7.014
 N
 O
ARG B:10 B:7 153.0 0.68 -66.3 142.7 NA NA NA
ARG C:10 C:7 182.0 0.809 -59.1 129.2 182.0 0.809 0.0 HOH
 5.821
 C
 O
ARG D:10 D:7 77.0 NA -56.9 127.4 NA NA NA
ARG E:10 E:7 77.0 NA -62.0 131.1 NA NA NA
ARG F:10 F:7 148.0 0.658 -60.8 132.5 NA NA NA
6mhc 1 P78417 100.0 0.0 X-RAY
 2019-02-20 ARG A:10 A:7 153.0 0.68 -67.7 139.5 153.0 0.68 0.0 HOH
 2.726
 O
 O
ARG B:10 B:7 156.0 0.693 -63.2 140.6 156.0 0.693 0.0 HOH
 2.696
 NH2
 O
6mhd 1 P78417 100.0 0.0 X-RAY
 2019-02-20 ARG A:10 A:7 138.0 0.613 -58.7 135.6 138.0 0.613 0.0 HOH
 2.785
 NE
 O
ARG B:10 B:7 149.0 0.662 -68.0 134.3 149.0 0.662 0.0 HOH
 2.835
 O
 O
1eem 1 P78417 100.0 0.0 X-RAY
 2000-08-11 ARG A:7 A:7 147.0 0.653 -56.6 137.7 147.0 0.653 0.0 HOH
 2.652
 O
 O
5v3q 1 P78417 100.0 0.0 X-RAY
 2017-12-20 ARG A:7 A:7 109.0 0.484 -51.8 139.7 109.0 0.484 0.0 HOH
 2.773
 O
 O
5yvn 1 P78417 100.0 0.0 X-RAY
 2018-11-28 ARG A:7 A:7 121.0 0.538 -53.2 137.9 121.0 0.538 0.0 SO4
HOH
 7.362
2.699
 N
NH2
 O2
O
5yvo 1 P78417 100.0 0.0 X-RAY
 2018-11-28 ARG A:7 A:7 123.0 0.547 -53.6 142.7 123.0 0.547 0.0 SO4
HOH
 7.306
2.603
 N
NH2
 O1
O
5ueh 1 P78417 100.0 0.0 X-RAY
 2018-01-17 ARG A:8 A:7 106.0 0.471 -55.5 144.0 106.0 0.471 0.0 SO4
HOH
 7.139
2.849
 N
O
 O1
O
6pnm 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 ARG A:6 A:7 118.0 0.524 -57.7 140.6 118.0 0.524 0.0 SO4
HOH
 7.353
2.815
 N
O
 O2
O
6pnn 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 ARG A:6 A:7 126.0 0.56 -50.8 140.0 126.0 0.56 0.0 HOH
 2.658
 O
 O
6pno 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 ARG A:6 A:7 115.0 0.511 -54.0 138.9 115.0 0.511 0.0 SO4
HOH
 7.355
2.795
 N
NH1
 O1
O
3vln 1 P78417 99.59 5e-180 X-RAY
 2012-05-16 ARG A:7 A:7 111.0 0.493 -53.4 139.3 111.0 0.493 0.0 GOL
HOH
 7.203
2.595
 N
NH1
 O2
O
4is0 1 P78417 99.59 5e-180 X-RAY
 2013-04-24 ARG A:7 A:7 124.0 0.551 -56.0 140.5 124.0 0.551 0.0 HOH
 2.833
 O
 O
3lfl 1 P78417 99.59 1e-178 X-RAY
 2010-11-24 ARG A:7 A:7 107.0 0.476 -58.1 137.4 107.0 0.476 0.0 HOH
 2.565
 O
 O
ARG B:7 B:7 236.0 1.0 -66.7 143.8 NA NA NA
ARG C:7 C:7 178.0 0.791 108.0 149.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78417-f1 1 P78417 100.0 0.0 ARG A:7 A:7 189.0 0.84 -57.4 141.9