Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 106015005 . T A CCDS7555.1:NM_004832.2:c.119cTa>cAa_NP_004823.1:p.40L>Q Homo sapiens glutathione S-transferase omega 1 (GSTO1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4yqm 1 P78417 100.0 0.0 X-RAY
 2016-10-12 LEU A:43 A:40 0.0 0.0 H -66.7 -35.3 0.0 0.0 0.0 HOH
 7.143
 CD1
 O
LEU B:43 B:40 0.0 0.0 H -61.7 -43.7 NA NA NA
LEU C:43 C:40 0.0 0.0 H -67.3 -36.4 NA NA NA
4yqu 1 P78417 100.0 0.0 X-RAY
 2016-10-12 LEU A:43 A:40 0.0 0.0 H -63.8 -41.0 0.0 0.0 0.0 HOH
 3.967
 CD2
 O
LEU B:43 B:40 0.0 0.0 H -61.1 -44.0 0.0 0.0 0.0 HOH
 4.136
 CD2
 O
4yqv 1 P78417 100.0 0.0 X-RAY
 2016-10-12 LEU A:43 A:40 0.0 0.0 H -65.0 -42.6 0.0 0.0 0.0 HOH
 4.725
 N
 O
LEU B:43 B:40 0.0 0.0 H -67.3 -37.5 NA NA NA
LEU C:43 C:40 0.0 0.0 H -67.4 -38.3 NA NA NA
6mhb 1 P78417 100.0 0.0 X-RAY
 2019-02-20 LEU A:43 A:40 0.0 0.0 H -68.0 -39.1 0.0 0.0 0.0 HOH
 8.116
 N
 O
LEU B:43 B:40 0.0 0.0 H -66.0 -41.5 NA NA NA
LEU C:43 C:40 0.0 0.0 H -66.5 -39.8 0.0 0.0 0.0 HOH
 7.346
 CD2
 O
LEU D:43 D:40 0.0 0.0 H -71.3 -42.5 NA NA NA
LEU E:43 E:40 0.0 0.0 H -68.3 -42.4 NA NA NA
LEU F:43 F:40 0.0 0.0 H -67.2 -39.8 NA NA NA
6mhc 1 P78417 100.0 0.0 X-RAY
 2019-02-20 LEU A:43 A:40 0.0 0.0 H -63.4 -42.8 0.0 0.0 0.0 PEG
HOH
 5.977
4.052
 O
CD2
 H11
O
LEU B:43 B:40 0.0 0.0 H -61.1 -43.6 0.0 0.0 0.0 PEG
HOH
 6.279
4.010
 O
CD2
 H22
O
6mhd 1 P78417 100.0 0.0 X-RAY
 2019-02-20 LEU A:43 A:40 0.0 0.0 H -64.5 -44.5 0.0 0.0 0.0 HOH
 4.822
 N
 O
LEU B:43 B:40 0.0 0.0 H -62.7 -42.3 0.0 0.0 0.0 HOH
 4.615
 N
 O
1eem 1 P78417 100.0 0.0 X-RAY
 2000-08-11 LEU A:40 A:40 0.0 0.0 H -65.3 -43.8 0.0 0.0 0.0 SO4
HOH
 5.939
4.024
 N
CD2
 O4
O
5v3q 1 P78417 100.0 0.0 X-RAY
 2017-12-20 LEU A:40 A:40 0.0 0.0 H -57.5 -43.1 0.0 0.0 0.0 SO4
HOH
 5.883
3.929
 N
CD2
 O4
O
5yvn 1 P78417 100.0 0.0 X-RAY
 2018-11-28 LEU A:40 A:40 0.0 0.0 H -61.0 -42.9 0.0 0.0 0.0 SO4
SO4
HOH
 5.971
9.848
4.033
 N
N
CD2
 O3
O3
O
5yvo 1 P78417 100.0 0.0 X-RAY
 2018-11-28 LEU A:40 A:40 0.0 0.0 H -62.4 -41.2 0.0 0.0 0.0 SO4
HOH
 5.873
3.963
 N
CD2
 O4
O
5ueh 1 P78417 100.0 0.0 X-RAY
 2018-01-17 LEU A:41 A:40 0.0 0.0 H -54.6 -46.8 0.0 0.0 0.0 SO4
SO4
HOH
 6.296
9.856
4.127
 N
N
CD2
 O4
O3
O
6pnm 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 LEU A:39 A:40 0.0 0.0 H -60.2 -46.5 0.0 0.0 0.0 SO4
SO4
HOH
 5.893
9.842
4.168
 N
N
CD2
 O3
O3
O
6pnn 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 LEU A:39 A:40 0.0 0.0 H -62.6 -43.5 0.0 0.0 0.0 SO4
HOH
 5.899
4.136
 N
CD2
 O4
O
6pno 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 LEU A:39 A:40 0.0 0.0 H -59.3 -44.5 0.0 0.0 0.0 SO4
SO4
HOH
 5.865
9.921
4.115
 N
N
CD2
 O3
O3
O
3vln 1 P78417 99.59 5e-180 X-RAY
 2012-05-16 LEU A:40 A:40 0.0 0.0 H -58.0 -44.2 0.0 0.0 0.0 SO4
GOL
HOH
 5.885
9.607
3.997
 N
N
CD2
 O4
O3
O
4is0 1 P78417 99.59 5e-180 X-RAY
 2013-04-24 LEU A:40 A:40 0.0 0.0 H -63.6 -42.1 0.0 0.0 0.0 SO4
HOH
 5.853
3.226
 N
HD23
 O4
O
3lfl 1 P78417 99.59 1e-178 X-RAY
 2010-11-24 LEU A:40 A:40 0.0 0.0 H -58.7 -48.1 0.0 0.0 0.0 HOH
 4.556
 N
 O
LEU B:40 B:40 7.0 0.041 H -64.2 -45.9 NA NA NA
LEU C:40 C:40 0.0 0.0 H -58.6 -48.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78417-f1 1 P78417 100.0 0.0 LEU A:40 A:40 0.0 0.0 H -57.8 -46.8