Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 106015022 . G A CCDS7555.1:NM_004832.2:c.136Gga>Aga_NP_004823.1:p.46G>R Homo sapiens glutathione S-transferase omega 1 (GSTO1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4yqm 1 P78417 100.0 0.0 X-RAY
 2016-10-12 GLY A:49 A:46 64.0 0.853 T 55.5 37.8 64.0 0.853 0.0 HOH
 4.430
 O
 O
GLY B:49 B:46 66.0 0.88 T 59.4 38.1 NA NA NA
GLY C:49 C:46 69.0 0.92 T 51.7 36.4 NA NA NA
4yqu 1 P78417 100.0 0.0 X-RAY
 2016-10-12 GLY A:49 A:46 67.0 0.893 T 62.2 38.5 67.0 0.893 0.0 HOH
 3.865
 C
 O
GLY B:49 B:46 67.0 0.893 T 61.3 38.9 67.0 0.893 0.0 HOH
 2.622
 O
 O
4yqv 1 P78417 100.0 0.0 X-RAY
 2016-10-12 GLY A:49 A:46 64.0 0.853 T 56.2 42.1 64.0 0.853 0.0 HOH
 3.879
 C
 O
GLY B:49 B:46 66.0 0.88 T 62.7 41.0 NA NA NA
GLY C:49 C:46 68.0 0.907 T 55.6 44.2 NA NA NA
6mhb 1 P78417 100.0 0.0 X-RAY
 2019-02-20 GLY A:49 A:46 65.0 0.867 T 58.7 34.8 65.0 0.867 0.0
GLY B:49 B:46 67.0 0.893 T 58.9 34.0 NA NA NA
GLY C:49 C:46 65.0 0.867 T 56.4 37.2 65.0 0.867 0.0 HOH
 4.380
 C
 O
GLY D:49 D:46 67.0 0.893 T 59.3 38.0 NA NA NA
GLY E:49 E:46 67.0 0.893 T 61.0 33.8 NA NA NA
GLY F:49 F:46 65.0 0.867 T 58.5 34.8 NA NA NA
6mhc 1 P78417 100.0 0.0 X-RAY
 2019-02-20 GLY A:49 A:46 67.0 0.893 T 63.2 41.5 67.0 0.893 0.0 PEG
HOH
 3.600
4.112
 CA
O
 H41
O
GLY B:49 B:46 65.0 0.867 T 62.8 44.6 65.0 0.867 0.0 PEG
HOH
 2.954
3.672
 N
O
 H41
O
6mhd 1 P78417 100.0 0.0 X-RAY
 2019-02-20 GLY A:49 A:46 65.0 0.867 T 59.3 42.9 65.0 0.867 0.0 HOH
 3.526
 C
 O
GLY B:49 B:46 67.0 0.893 T 52.8 48.7 67.0 0.893 0.0 HOH
 4.070
 N
 O
1eem 1 P78417 100.0 0.0 X-RAY
 2000-08-11 GLY A:46 A:46 65.0 0.867 T 54.6 51.6 65.0 0.867 0.0 HOH
 3.747
 CA
 O
5v3q 1 P78417 100.0 0.0 X-RAY
 2017-12-20 GLY A:46 A:46 66.0 0.88 T 71.5 34.3 66.0 0.88 0.0 SO4
HOH
 9.966
4.038
 C
C
 O1
O
5yvn 1 P78417 100.0 0.0 X-RAY
 2018-11-28 GLY A:46 A:46 68.0 0.907 T 64.8 38.6 68.0 0.907 0.0 HOH
 2.775
 O
 O
5yvo 1 P78417 100.0 0.0 X-RAY
 2018-11-28 GLY A:46 A:46 66.0 0.88 T 64.6 40.3 66.0 0.88 0.0 SO4
HOH
 9.974
2.606
 C
O
 O2
O
5ueh 1 P78417 100.0 0.0 X-RAY
 2018-01-17 GLY A:47 A:46 67.0 0.893 T 63.8 38.0 67.0 0.893 0.0 SO4
HOH
 4.876
3.992
 O
O
 O4
O
6pnm 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 GLY A:45 A:46 66.0 0.88 T 65.0 39.7 66.0 0.88 0.0 HOH
 3.177
 O
 O
6pnn 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 GLY A:45 A:46 67.0 0.893 T 67.8 32.1 67.0 0.893 0.0 HOH
 3.327
 CA
 O
6pno 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 GLY A:45 A:46 67.0 0.893 T 66.0 40.2 67.0 0.893 0.0 HOH
 2.609
 O
 O
3vln 1 P78417 99.59 5e-180 X-RAY
 2012-05-16 GLY A:46 A:46 67.0 0.893 T 65.9 37.0 67.0 0.893 0.0 SO4
HOH
 9.954
3.426
 C
CA
 O1
O
4is0 1 P78417 99.59 5e-180 X-RAY
 2013-04-24 GLY A:46 A:46 67.0 0.893 T 69.1 36.3 67.0 0.893 0.0 SO4
HOH
 9.523
3.398
 HA2
HA2
 O1
O
3lfl 1 P78417 99.59 1e-178 X-RAY
 2010-11-24 GLY A:46 A:46 61.0 0.813 T 63.8 36.0 61.0 0.813 0.0 HOH
 3.904
 C
 O
GLY B:46 B:46 66.0 0.88 T 62.6 44.4 NA NA NA
GLY C:46 C:46 66.0 0.88 T 55.3 41.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78417-f1 1 P78417 100.0 0.0 GLY A:46 A:46 66.0 0.88 T 65.3 27.3