Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 106019509 . C A CCDS7555.1:NM_004832.2:c.319Ccc>Acc_NP_004823.1:p.107P>T Homo sapiens glutathione S-transferase omega 1 (GSTO1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4yqm 1 P78417 100.0 0.0 X-RAY
 2016-10-12 PRO A:110 A:107 101.0 0.697 H -60.5 -37.3 26.0 0.179 0.518 A:P78417:0.517
 HOH
 5.631
 C
 O
PRO B:110 B:107 106.0 0.731 H -48.3 -38.6 NA NA NA
PRO C:110 C:107 93.0 0.641 H -52.3 -40.3 NA NA NA
4yqu 1 P78417 100.0 0.0 X-RAY
 2016-10-12 PRO A:110 A:107 102.0 0.703 H -54.6 -41.8 29.0 0.2 0.503 B:P78417:0.503
 HOH
 2.764
 O
 O
PRO B:110 B:107 102.0 0.703 H -53.3 -43.7 28.0 0.193 0.51 A:P78417:0.51
 HOH
 2.837
 O
 O
4yqv 1 P78417 100.0 0.0 X-RAY
 2016-10-12 PRO A:110 A:107 102.0 0.703 H -50.9 -43.3 26.0 0.179 0.524 A:P78417:0.524
 HOH
 2.727
 O
 O
PRO B:110 B:107 102.0 0.703 H -52.8 -46.0 NA NA NA
PRO C:110 C:107 101.0 0.697 H -52.7 -39.5 NA NA NA
6mhb 1 P78417 100.0 0.0 X-RAY
 2019-02-20 PRO A:110 A:107 98.0 0.676 H -54.0 -45.8 28.0 0.193 0.483 C:P78417:0.483
 HOH
 8.502
 O
 O
PRO B:110 B:107 103.0 0.71 H -55.8 -43.3 NA NA NA
PRO C:110 C:107 100.0 0.69 H -53.3 -44.6 28.0 0.193 0.497 A:P78417:0.497
 HOH
 8.823
 CG
 O
PRO D:110 D:107 104.0 0.717 H -52.8 -43.8 NA NA NA
PRO E:110 E:107 102.0 0.703 H -54.6 -44.6 NA NA NA
PRO F:110 F:107 104.0 0.717 H -54.7 -43.5 NA NA NA
6mhc 1 P78417 100.0 0.0 X-RAY
 2019-02-20 PRO A:110 A:107 101.0 0.697 H -50.3 -46.2 27.0 0.186 0.511 B:P78417:0.51
 HOH
 2.708
 O
 O
PRO B:110 B:107 104.0 0.717 H -54.5 -40.1 31.0 0.214 0.503 A:P78417:0.503
 HOH
 2.663
 O
 O
6mhd 1 P78417 100.0 0.0 X-RAY
 2019-02-20 PRO A:110 A:107 101.0 0.697 H -58.1 -38.0 35.0 0.241 0.456 B:P78417:0.455
 HOH
 2.677
 O
 O
PRO B:110 B:107 103.0 0.71 H -55.5 -36.6 24.0 0.166 0.544 A:P78417:0.545
 HOH
 2.661
 O
 O
1eem 1 P78417 100.0 0.0 X-RAY
 2000-08-11 PRO A:107 A:107 98.0 0.676 H -49.0 -54.0 28.0 0.193 0.483 A:P78417:0.483
 HOH
 3.297
 CB
 O
5v3q 1 P78417 100.0 0.0 X-RAY
 2017-12-20 PRO A:107 A:107 102.0 0.703 H -51.0 -45.2 28.0 0.193 0.51 A:P78417:0.51
 HOH
 2.853
 O
 O
5yvn 1 P78417 100.0 0.0 X-RAY
 2018-11-28 PRO A:107 A:107 102.0 0.703 H -57.7 -42.0 28.0 0.193 0.51 A:P78417:0.51
 HOH
 2.798
 O
 O
5yvo 1 P78417 100.0 0.0 X-RAY
 2018-11-28 PRO A:107 A:107 102.0 0.703 H -58.7 -43.0 28.0 0.193 0.51 A:P78417:0.51
 MLX
HOH
 9.040
2.761
 O
O
 C03
O
5ueh 1 P78417 100.0 0.0 X-RAY
 2018-01-17 PRO A:108 A:107 101.0 0.697 H -51.2 -46.8 28.0 0.193 0.504 A:P78417:0.503
 GOL
HOH
 9.075
2.712
 O
O
 O3
O
6pnm 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 PRO A:106 A:107 101.0 0.697 H -53.4 -42.9 27.0 0.186 0.511 A:P78417:0.51
 HOH
 2.808
 O
 O
6pnn 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 PRO A:106 A:107 100.0 0.69 H -56.9 -40.7 26.0 0.179 0.511 A:P78417:0.51
 HOH
 2.612
 O
 O
6pno 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 PRO A:106 A:107 103.0 0.71 H -52.4 -43.6 27.0 0.186 0.524 A:P78417:0.524
 HOH
 2.851
 O
 O
3vln 1 P78417 99.59 5e-180 X-RAY
 2012-05-16 PRO A:107 A:107 100.0 0.69 H -60.6 -37.2 27.0 0.186 0.504 A:P78417:0.503
 SO4
GOL
EDO
EDO
HOH
 8.863
9.022
9.176
6.197
2.807
 O
O
O
O
O
 O3
O3
C1
O2
O
4is0 1 P78417 99.59 5e-180 X-RAY
 2013-04-24 PRO A:107 A:107 96.0 0.662 H -58.9 -42.5 27.0 0.186 0.476 A:P78417:0.476
 DTT
1R4
HOH
 8.366
9.310
2.478
 O
O
HD2
 HO3
H261
O
3lfl 1 P78417 99.59 1e-178 X-RAY
 2010-11-24 PRO A:107 A:107 99.0 0.683 H -60.9 -41.9 28.0 0.193 0.49 A:P78417:0.49
 HOH
 2.801
 O
 O
PRO B:107 B:107 99.0 0.683 H -56.2 -49.0 NA NA NA
PRO C:107 C:107 99.0 0.683 H -52.6 -45.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78417-f1 1 P78417 100.0 0.0 PRO A:107 A:107 101.0 0.697 H -60.0 -33.1