Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 106022789 . C A CCDS7555.1:NM_004832.2:c.419gCt>gAt_NP_004823.1:p.140A>D Homo sapiens glutathione S-transferase omega 1 (GSTO1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4yqm 1 P78417 100.0 0.0 X-RAY
 2016-10-12 ALA A:143 A:140 67.0 0.583 H -63.7 -39.1 67.0 0.583 0.0
ALA B:143 B:140 69.0 0.6 H -59.0 -43.7 NA NA NA
ALA C:143 C:140 61.0 0.53 H -74.9 -30.1 NA NA NA
4yqu 1 P78417 100.0 0.0 X-RAY
 2016-10-12 ALA A:143 A:140 73.0 0.635 H -52.2 -47.3 73.0 0.635 0.0 HOH
 2.747
 O
 O
ALA B:143 B:140 74.0 0.643 H -56.1 -53.4 74.0 0.643 0.0 HOH
 2.858
 O
 O
4yqv 1 P78417 100.0 0.0 X-RAY
 2016-10-12 ALA A:143 A:140 70.0 0.609 H -58.4 -29.9 70.0 0.609 0.0 HOH
 4.942
 C
 O
ALA B:143 B:140 66.0 0.574 H -65.0 -43.5 NA NA NA
ALA C:143 C:140 61.0 0.53 H -57.2 -39.8 NA NA NA
6mhb 1 P78417 100.0 0.0 X-RAY
 2019-02-20 ALA A:143 A:140 72.0 0.626 H -61.7 -44.8 72.0 0.626 0.0
ALA B:143 B:140 76.0 0.661 H -64.1 -40.0 NA NA NA
ALA C:143 C:140 69.0 0.6 H -69.9 -38.1 69.0 0.6 0.0 HOH
 6.621
 C
 O
ALA D:143 D:140 62.0 0.539 H -66.1 -36.7 NA NA NA
ALA E:143 E:140 69.0 0.6 H -66.7 -42.7 NA NA NA
ALA F:143 F:140 72.0 0.626 H -65.4 -42.6 NA NA NA
6mhc 1 P78417 100.0 0.0 X-RAY
 2019-02-20 ALA A:143 A:140 62.0 0.539 H -61.0 -41.3 62.0 0.539 0.0 HOH
 2.714
 O
 O
ALA B:143 B:140 61.0 0.53 H -58.9 -43.6 61.0 0.53 0.0 HOH
 2.671
 O
 O
6mhd 1 P78417 100.0 0.0 X-RAY
 2019-02-20 ALA A:143 A:140 61.0 0.53 H -71.0 -41.6 61.0 0.53 0.0
ALA B:143 B:140 60.0 0.522 H -62.8 -31.0 60.0 0.522 0.0 HOH
 5.062
 O
 O
1eem 1 P78417 100.0 0.0 X-RAY
 2000-08-11 ALA A:140 A:140 55.0 0.478 H -56.2 -47.1 55.0 0.478 0.0 HOH
 3.758
 CB
 O
5v3q 1 P78417 100.0 0.0 X-RAY
 2017-12-20 ALA A:140 A:140 53.0 0.461 H -48.1 -53.4 53.0 0.461 0.0 HOH
 2.527
 O
 O
5yvn 1 P78417 100.0 0.0 X-RAY
 2018-11-28 ALA A:140 A:140 53.0 0.461 H -58.5 -46.1 53.0 0.461 0.0 HOH
 2.820
 O
 O
5yvo 1 P78417 100.0 0.0 X-RAY
 2018-11-28 ALA A:140 A:140 50.0 0.435 H -62.5 -39.9 50.0 0.435 0.0 HOH
 2.634
 O
 O
5ueh 1 P78417 100.0 0.0 X-RAY
 2018-01-17 ALA A:141 A:140 56.0 0.487 H -58.9 -45.5 56.0 0.487 0.0 HOH
 2.777
 O
 O
6pnm 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 ALA A:139 A:140 52.0 0.452 H -60.2 -44.7 52.0 0.452 0.0 SO4
HOH
 9.986
2.607
 C
O
 O4
O
6pnn 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 ALA A:139 A:140 56.0 0.487 H -57.6 -51.4 56.0 0.487 0.0 HOH
 2.657
 O
 O
6pno 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 ALA A:139 A:140 55.0 0.478 H -57.6 -46.5 55.0 0.478 0.0 HOH
 2.602
 O
 O
3vln 1 P78417 99.59 5e-180 X-RAY
 2012-05-16 ALA A:140 A:140 53.0 0.461 H -52.1 -41.8 53.0 0.461 0.0 HOH
 3.397
 CB
 O
4is0 1 P78417 99.59 5e-180 X-RAY
 2013-04-24 ALA A:140 A:140 56.0 0.487 H -64.2 -41.4 56.0 0.487 0.0 HOH
 2.899
 HB3
 O
3lfl 1 P78417 99.59 1e-178 X-RAY
 2010-11-24 ALA A:140 A:140 57.0 0.496 H -58.0 -53.5 57.0 0.496 0.0 DTT
HOH
 6.094
7.331
 O
O
 O3
O
ALA B:140 B:140 61.0 0.53 H -61.9 -54.5 NA NA NA
ALA C:140 C:140 47.0 0.409 H -65.3 -36.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78417-f1 1 P78417 100.0 0.0 ALA A:140 A:140 72.0 0.626 H -62.2 -48.0