Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 106025879 . A C CCDS7555.1:NM_004832.2:c.503aAt>aCt_NP_004823.1:p.168N>T Homo sapiens glutathione S-transferase omega 1 (GSTO1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4yqm 1 P78417 100.0 0.0 X-RAY
 2016-10-12 ASN A:171 A:168 88.0 NA S -84.9 -18.2 88.0 NA NA HOH
 4.657
 O
 O
ASN B:171 B:168 111.0 0.694 S -87.8 2.3 NA NA NA
ASN C:171 C:168 125.0 0.781 S -82.3 -2.7 NA NA NA
4yqu 1 P78417 100.0 0.0 X-RAY
 2016-10-12 ASN A:171 A:168 129.0 0.806 S -76.8 -8.1 129.0 0.806 0.0 HOH
 2.757
 OD1
 O
ASN B:171 B:168 119.0 0.744 S -79.9 -2.5 119.0 0.744 0.0 HOH
 2.851
 N
 O
4yqv 1 P78417 100.0 0.0 X-RAY
 2016-10-12 ASN A:171 A:168 107.0 0.669 S -89.4 5.4 107.0 0.669 0.0 HOH
 2.776
 O
 O
ASN B:171 B:168 120.0 0.75 S -82.5 -6.4 NA NA NA
ASN C:171 C:168 127.0 0.794 S -77.4 -12.5 NA NA NA
6mhb 1 P78417 100.0 0.0 X-RAY
 2019-02-20 ASN A:171 A:168 113.0 0.706 S -87.9 3.6 113.0 0.706 0.0 HOH
 8.625
 N
 O
ASN B:171 B:168 116.0 0.725 S -88.3 6.0 NA NA NA
ASN C:171 C:168 114.0 0.713 S -88.0 6.3 114.0 0.713 0.0 HOH
 3.789
 N
 O
ASN D:171 D:168 113.0 0.706 S -88.3 6.2 NA NA NA
ASN E:171 E:168 114.0 0.713 S -88.5 5.5 NA NA NA
ASN F:171 F:168 110.0 0.688 S -88.2 6.1 NA NA NA
6mhc 1 P78417 100.0 0.0 X-RAY
 2019-02-20 ASN A:171 A:168 140.0 0.875 S -67.3 -33.9 140.0 0.875 0.0 HOH
 2.710
 O
 O
ASN B:171 B:168 112.0 0.7 S -84.5 0.2 112.0 0.7 0.0 HOH
 2.763
 O
 O
6mhd 1 P78417 100.0 0.0 X-RAY
 2019-02-20 ASN A:171 A:168 121.0 0.756 S -89.5 -3.2 121.0 0.756 0.0 HOH
 5.467
 N
 O
ASN B:171 B:168 79.0 NA S -68.2 -33.7 79.0 NA NA HOH
 5.624
 N
 O
1eem 1 P78417 100.0 0.0 X-RAY
 2000-08-11 ASN A:168 A:168 109.0 0.681 S -81.0 -19.2 109.0 0.681 0.0 HOH
 3.094
 CB
 O
5v3q 1 P78417 100.0 0.0 X-RAY
 2017-12-20 ASN A:168 A:168 113.0 0.706 S -83.0 -18.8 113.0 0.706 0.0 HOH
 3.409
 N
 O
5yvn 1 P78417 100.0 0.0 X-RAY
 2018-11-28 ASN A:168 A:168 114.0 0.713 S -80.7 -18.7 114.0 0.713 0.0 HOH
 2.640
 O
 O
5yvo 1 P78417 100.0 0.0 X-RAY
 2018-11-28 ASN A:168 A:168 115.0 0.719 S -87.0 -8.6 115.0 0.719 0.0 HOH
 2.331
 O
 O
5ueh 1 P78417 100.0 0.0 X-RAY
 2018-01-17 ASN A:169 A:168 115.0 0.719 S -87.7 -13.7 115.0 0.719 0.0 HOH
 2.806
 OD1
 O
6pnm 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 ASN A:167 A:168 114.0 0.713 S -85.4 -21.7 114.0 0.713 0.0 HOH
 3.714
 CB
 O
6pnn 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 ASN A:167 A:168 107.0 0.669 S -81.7 -17.1 107.0 0.669 0.0 HOH
 3.086
 O
 O
6pno 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 ASN A:167 A:168 107.0 0.669 S -88.2 -9.6 107.0 0.669 0.0 HOH
 2.001
 ND2
 O
3vln 1 P78417 99.59 5e-180 X-RAY
 2012-05-16 ASN A:168 A:168 114.0 0.713 S -85.3 -7.2 114.0 0.713 0.0 HOH
 2.300
 O
 O
4is0 1 P78417 99.59 5e-180 X-RAY
 2013-04-24 ASN A:168 A:168 102.0 0.637 S -87.3 -4.1 102.0 0.637 0.0 HOH
 2.607
 HD21
 O
3lfl 1 P78417 99.59 1e-178 X-RAY
 2010-11-24 ASN A:167 A:167 131.0 0.819 S -82.0 -8.1 131.0 0.819 0.0 HOH
 2.618
 O
 O
ASN B:167 B:167 118.0 0.738 S -73.6 -22.2 NA NA NA
ASN C:167 C:167 136.0 0.85 S -76.3 -12.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78417-f1 1 P78417 100.0 0.0 ASN A:168 A:168 137.0 0.856 S -76.7 -12.9