Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 106025924 . G A CCDS7555.1:NM_004832.2:c.548cGg>cAg_NP_004823.1:p.183R>Q Homo sapiens glutathione S-transferase omega 1 (GSTO1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4yqm 1 P78417 100.0 0.0 X-RAY
 2016-10-12 ARG A:186 A:183 5.0 0.022 T -93.1 -7.3 5.0 0.022 0.0 4G9
HOH
 6.309
4.666
 NE
NH2
 C10
O
ARG B:186 B:183 7.0 0.031 T -82.0 -6.3 NA NA NA
ARG C:186 C:183 9.0 0.04 T -91.2 -6.1 NA NA NA
4yqu 1 P78417 100.0 0.0 X-RAY
 2016-10-12 ARG A:186 A:183 4.0 0.018 H -85.5 3.3 4.0 0.018 0.0 4GB
HOH
 4.984
3.042
 NE
NH2
 O3
O
ARG B:186 B:183 5.0 0.022 H -81.1 -20.1 5.0 0.022 0.0 4GB
HOH
 4.957
2.851
 NE
NH2
 O3
O
4yqv 1 P78417 100.0 0.0 X-RAY
 2016-10-12 ARG A:186 A:183 18.0 0.08 T -86.4 -3.8 18.0 0.08 0.0 4GG
HOH
 3.382
2.891
 NE
NH2
 C10
O
ARG B:186 B:183 19.0 0.084 T -92.9 4.5 NA NA NA
ARG C:186 C:183 18.0 0.08 T -88.1 -6.0 NA NA NA
6mhb 1 P78417 100.0 0.0 X-RAY
 2019-02-20 ARG A:186 A:183 19.0 0.084 T -96.6 -6.6 19.0 0.084 0.0 JR7
HOH
 3.425
5.289
 NE
NH2
 C6
O
ARG B:186 B:183 18.0 0.08 T -91.2 -4.2 NA NA NA
ARG C:186 C:183 18.0 0.08 T -94.1 -6.7 18.0 0.08 0.0 JR7
HOH
 3.412
4.706
 NE
NH2
 C6
O
ARG D:186 D:183 21.0 0.093 T -93.0 -6.7 NA NA NA
ARG E:186 E:183 22.0 0.098 T -93.6 -7.8 NA NA NA
ARG F:186 F:183 18.0 0.08 H -79.5 -27.7 NA NA NA
6mhc 1 P78417 100.0 0.0 X-RAY
 2019-02-20 ARG A:186 A:183 18.0 0.08 T -100.3 1.5 18.0 0.08 0.0 JRM
HOH
 8.425
2.965
 CG
NE
 H19
O
ARG B:186 B:183 18.0 0.08 T -99.7 -0.4 18.0 0.08 0.0 JRM
HOH
 8.405
2.884
 CG
NH1
 H19
O
6mhd 1 P78417 100.0 0.0 X-RAY
 2019-02-20 ARG A:186 A:183 18.0 0.08 T -98.1 -1.9 18.0 0.08 0.0 JRD
ACN
HOH
 7.951
5.708
2.808
 CG
CG
NH1
 H20
H13
O
ARG B:186 B:183 17.0 0.076 T -99.8 -1.3 17.0 0.076 0.0 JRD
ACN
HOH
 7.920
6.008
2.891
 CG
CG
NH1
 H20
H22
O
1eem 1 P78417 100.0 0.0 X-RAY
 2000-08-11 ARG A:183 A:183 8.0 0.036 H -83.4 -13.1 8.0 0.036 0.0 GSH
HOH
 7.357
2.763
 NH2
NH2
 SG2
O
5v3q 1 P78417 100.0 0.0 X-RAY
 2017-12-20 ARG A:183 A:183 7.0 0.031 H -77.9 -10.5 7.0 0.031 0.0 MLX
HOH
 4.726
2.781
 CD
NH2
 O12
O
5yvn 1 P78417 100.0 0.0 X-RAY
 2018-11-28 ARG A:183 A:183 10.0 0.044 T -89.5 -4.5 10.0 0.044 0.0 GSH
SO4
HOH
 7.255
9.290
2.925
 NH2
NH2
NE
 SG2
O3
O
5yvo 1 P78417 100.0 0.0 X-RAY
 2018-11-28 ARG A:183 A:183 6.0 0.027 H -79.9 -17.0 6.0 0.027 0.0 SO4
MLX
HOH
 9.214
3.918
2.986
 NH2
CD
NH2
 O4
F14
O
5ueh 1 P78417 100.0 0.0 X-RAY
 2018-01-17 ARG A:184 A:183 19.0 0.084 T -94.8 3.6 19.0 0.084 0.0 HOH
 4.310
 C
 O
6pnm 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 ARG A:182 A:183 6.0 0.027 T -84.8 -7.5 6.0 0.027 0.0 XX0
SO4
HOH
 2.690
9.307
3.129
 NE
NH2
NH2
 O71
O3
O
6pnn 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 ARG A:182 A:183 7.0 0.031 T -86.3 -8.5 7.0 0.031 0.0 OR7
HOH
 4.791
2.940
 NE
NH2
 OAO
O
6pno 1 P78417 100.0 3e-180 X-RAY
 2019-07-24 ARG A:182 A:183 7.0 0.031 H -78.7 -8.9 7.0 0.031 0.0 ORM
SO4
HOH
 5.028
9.427
3.034
 NE
NH2
NH2
 OAJ
O3
O
3vln 1 P78417 99.59 5e-180 X-RAY
 2012-05-16 ARG A:183 A:183 9.0 0.04 H -80.8 -13.2 9.0 0.04 0.0 GOL
ACT
HOH
 8.766
7.131
2.899
 NH2
NH2
NE
 O3
OXT
O
4is0 1 P78417 99.59 5e-180 X-RAY
 2013-04-24 ARG A:183 A:183 7.0 0.031 T -85.0 -7.7 7.0 0.031 0.0 GDS
HOH
 3.495
2.276
 HD3
HH22
 OE4
O
3lfl 1 P78417 99.59 1e-178 X-RAY
 2010-11-24 ARG A:182 A:182 32.0 0.142 H -66.3 -41.5 32.0 0.142 0.0 GSH
HOH
 6.367
2.801
 NH1
NE
 SG2
O
ARG B:182 B:182 0.0 0.0 T -80.9 -12.1 NA NA NA
ARG C:182 C:182 8.0 0.036 T -74.6 -8.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78417-f1 1 P78417 100.0 0.0 ARG A:183 A:183 6.0 0.027 T -84.3 -8.8