Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 1087150 . G A CCDS7056.1:NM_004508.2:c.832Cat>Tat_NP_004499.2:p.278H>Y Homo sapiens isopentenyl-diphosphate delta isomerase 1 (IDI1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2icj 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 HIS A:227 A:222 78.0 0.4 S -91.8 3.9 78.0 0.4 0.0 HOH
 2.898
 N
 O
2ick 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 HIS A:227 A:222 77.0 0.395 S -91.9 2.8 77.0 0.395 0.0 HOH
 2.862
 O
 O
2dho 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 HIS A:229 A:221 77.0 0.395 S -99.1 9.1 77.0 0.395 0.0 HOH
 2.771
 ND1
 O
2i6k 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 HIS A:229 A:221 83.0 0.426 S -96.2 11.5 83.0 0.426 0.0 ACY
HOH
 5.216
3.071
 O
O
 CH3
O
HIS B:229 B:221 83.0 0.426 S -96.6 9.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13907-f1 1 Q13907 100.0 1e-170 HIS A:221 A:221 86.0 0.441 S -92.3 -18.7