Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 1087182 . T A CCDS7056.1:NM_004508.2:c.800gAt>gTt_NP_004499.2:p.267D>V Homo sapiens isopentenyl-diphosphate delta isomerase 1 (IDI1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2icj 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 ASP A:216 A:211 104.0 0.693 T -80.4 -12.2 104.0 0.693 0.0 HOH
 2.719
 OD1
 O
2ick 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 ASP A:216 A:211 108.0 0.72 H -83.6 -20.3 108.0 0.72 0.0 HOH
 3.471
 O
 O
2dho 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 ASP A:218 A:210 98.0 0.653 T -71.1 -10.8 98.0 0.653 0.0 NA
CL
CL
CL
HOH
 3.674
6.352
7.331
9.979
3.111
 O
CA
O
O
OD1
 NA
CL
CL
CL
O
2i6k 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 ASP A:218 A:210 114.0 0.76 H -67.8 -22.8 114.0 0.76 0.0 HOH
 8.435
 OD2
 O
ASP B:218 B:210 112.0 0.747 H -64.9 -23.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13907-f1 1 Q13907 100.0 1e-170 ASP A:210 A:210 110.0 0.733 T -68.5 -15.2