Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 1087257 . T A CCDS7056.1:NM_004508.2:c.725aAa>aTa_NP_004499.2:p.242K>I Homo sapiens isopentenyl-diphosphate delta isomerase 1 (IDI1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2icj 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 LYS A:191 A:186 67.0 0.335 H -66.2 -22.5 67.0 0.335 0.0 HOH
 2.747
 NZ
 O
2ick 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 LYS A:191 A:186 67.0 0.335 H -70.4 -21.5 67.0 0.335 0.0 HOH
 3.160
 CD
 O
2dho 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 LYS A:193 A:185 79.0 0.395 H -67.7 -36.5 79.0 0.395 0.0 CL
HOH
 6.633
3.381
 C
CD
 CL
O
2i6k 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 LYS A:193 A:185 95.0 0.475 H -69.6 -35.3 95.0 0.475 0.0 ACY
HOH
 6.215
3.754
 C
CG
 OXT
O
LYS B:193 B:185 96.0 0.48 H -68.8 -34.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13907-f1 1 Q13907 100.0 1e-170 LYS A:185 A:185 71.0 0.355 H -61.2 -36.5