Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 1087291 . C A CCDS7056.1:NM_004508.2:c.691Gtg>Ttg_NP_004499.2:p.231V>L Homo sapiens isopentenyl-diphosphate delta isomerase 1 (IDI1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2icj 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 VAL A:180 A:175 11.0 0.071 E -126.4 145.3 11.0 0.071 0.0 HOH
 4.983
 O
 O
2ick 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 VAL A:180 A:175 11.0 0.071 E -128.8 146.9 11.0 0.071 0.0 HOH
 5.810
 N
 O
2dho 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 VAL A:182 A:174 3.0 0.019 E -123.2 135.3 3.0 0.019 0.0 CL
HOH
 8.075
3.946
 O
CG1
 CL
O
2i6k 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 VAL A:182 A:174 9.0 0.058 E -123.2 143.2 9.0 0.058 0.0 HOH
 4.947
 O
 O
VAL B:182 B:174 5.0 0.032 E -125.0 140.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13907-f1 1 Q13907 100.0 1e-170 VAL A:174 A:174 9.0 0.058 E -123.7 145.0