Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 1088637 . C A CCDS7056.1:NM_004508.2:c.472Gcc>Tcc_NP_004499.2:p.158A>S Homo sapiens isopentenyl-diphosphate delta isomerase 1 (IDI1), mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2icj 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 ALA A:107 A:102 7.0 0.061 G 51.8 29.8 7.0 0.061 0.0 HOH
 3.428
 N
 O
2ick 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 ALA A:107 A:102 9.0 0.078 G 53.4 32.3 9.0 0.078 0.0 HOH
 3.349
 N
 O
2dho 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 ALA A:109 A:101 7.0 0.061 G 51.5 32.1 7.0 0.061 0.0 MN
HOH
 8.141
3.330
 N
N
 MN
O
2i6k 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 ALA A:109 A:101 10.0 0.087 G 52.3 33.5 10.0 0.087 0.0 MG
ACY
HOH
 8.458
7.917
3.395
 N
CB
CA
 MG
OXT
O
ALA B:109 B:101 11.0 0.096 G 52.9 34.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13907-f1 1 Q13907 100.0 1e-170 ALA A:101 A:101 5.0 0.043 G 49.5 26.6