Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 1089294 . G A CCDS7056.1:NM_004508.2:c.353aCc>aTc_NP_004499.2:p.118T>I Homo sapiens isopentenyl-diphosphate delta isomerase 1 (IDI1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2icj 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 THR A:67 A:62 107.0 0.764 T -64.1 -28.1 107.0 0.764 0.0 HOH
 3.224
 N
 O
2ick 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 THR A:67 A:62 104.0 0.743 T -60.3 -28.2 104.0 0.743 0.0 HOH
 3.281
 N
 O
2dho 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 THR A:69 A:61 84.0 0.6 T -85.3 13.3 84.0 0.6 0.0 CL
CL
HOH
 8.808
7.368
2.665
 C
O
OG1
 CL
CL
O
2i6k 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 THR A:69 A:61 96.0 0.686 T -78.1 -11.7 96.0 0.686 0.0 HOH
 5.725
 N
 O
THR B:69 B:61 96.0 0.686 T -76.7 -10.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13907-f1 1 Q13907 100.0 1e-170 THR A:61 A:61 78.0 0.557 T -66.8 -21.6