Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 1090023 . T A CCDS7056.1:NM_004508.2:c.229Atg>Ttg_NP_004499.2:p.77M>L Homo sapiens isopentenyl-diphosphate delta isomerase 1 (IDI1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2icj 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 MET A:26 A:21 73.0 0.395 E -93.7 117.8 73.0 0.395 0.0 HOH
 2.835
 N
 O
2ick 1 Q86U81 100.0 4e-171 X-RAY
 2007-03-20 MET A:26 A:21 77.0 0.416 E -93.4 117.2 77.0 0.416 0.0 HOH
 2.690
 N
 O
2dho 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 MET A:28 A:20 69.0 0.373 E -106.7 142.8 69.0 0.373 0.0 MN
HOH
 9.515
2.545
 O
O
 MN
O
2i6k 1 Q13907 98.27 2e-169 X-RAY
 2007-06-05 MSE A:28 A:20 77.0 0.416 E -93.9 117.4 77.0 0.416 0.0 EA2
HOH
 9.790
3.204
 N
N
 O1P
O
MSE B:28 B:20 78.0 0.422 E -94.6 117.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13907-f1 1 Q13907 100.0 1e-170 MET A:20 A:20 79.0 0.427 E -90.7 108.3