Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 115481427 . G A CCDS7580.1:NM_033338.5:c.364Gga>Aga_NP_203124.1:p.122G>R Homo sapiens caspase 7 (CASP7), transcript variant a, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5v6u 1 P55210 100.0 0.0 X-RAY
 2017-10-18 GLY A:89 A:89 11.0 0.147 T 113.1 -17.7 11.0 0.147 0.0 HOH
 2.610
 N
 O
GLY B:89 B:89 7.0 0.093 T 102.7 -16.6 7.0 0.093 0.0 HOH
 3.179
 N
 O
5v6z 1 P55210 100.0 0.0 X-RAY
 2018-03-21 GLY A:89 A:89 14.0 0.187 T 93.4 -13.0 14.0 0.187 0.0 HOH
 2.762
 N
 O
GLY B:89 B:89 9.0 0.12 T 99.4 -14.9 9.0 0.12 0.0 HOH
 3.136
 N
 O
4fdl 1 P55210 100.0 0.0 X-RAY
 2012-08-01 GLY A:91 A:89 10.0 0.133 T 97.5 -18.7 10.0 0.133 0.0 HOH
 4.796
 O
 O
GLY B:91 B:89 4.0 0.053 T 114.4 -23.1 4.0 0.053 0.0 HOH
 5.000
 O
 O
1kmc 1 P55210 99.67 0.0 X-RAY
 2002-01-16 GLY A:89 A:181 11.0 0.147 T 110.9 -19.8 11.0 0.147 0.0 HOH
 3.237
 N
 O
GLY B:89 B:181 10.0 0.133 T 108.5 -19.4 10.0 0.133 0.0 HOH
 2.991
 CA
 O
1f1j 1 P55210 99.67 0.0 X-RAY
 2001-05-23 GLY A:91 A:89 7.0 0.093 T 93.1 -11.7 7.0 0.093 0.0 SO4
HOH
 2.677
4.941
 N
N
 O3
O
GLY B:91 B:389 2.0 0.027 T 101.1 -11.5 NA NA NA
3r5k 1 P55210 99.01 0.0 X-RAY
 2011-06-29 GLY A:89 A:89 8.0 0.107 T 105.2 -29.1 8.0 0.107 0.0 FMT
FMT
HOH
 3.039
8.881
3.090
 N
C
N
 O2
O1
O
GLY B:89 B:389 7.0 0.093 T 103.6 -11.7 7.0 0.093 0.0 FMT
HOH
 8.484
2.966
 C
N
 O2
O
1i4o 1 P55210 100.0 0.0 X-RAY
 2001-03-21 GLY A:66 A:89 9.0 0.12 T 102.2 -12.9 9.0 0.12 0.0 HOH
 2.657
 N
 O
GLY B:66 B:89 9.0 0.12 T 111.6 -15.4 NA NA NA
1gqf 1 P55210 99.61 0.0 X-RAY
 2002-01-04 GLY A:43 A:181 8.0 0.107 T 70.4 -18.7 8.0 0.107 0.0 SO4
HOH
 6.340
2.903
 C
N
 O3
O
GLY B:43 B:181 12.0 0.16 94.1 -20.9 12.0 0.16 0.0 SO4
SO4
SO4
HOH
 6.682
2.881
8.257
5.281
 C
N
N
O
 O3
O1
O3
O
1shj 1 P55210 99.61 0.0 X-RAY
 2004-08-17 GLY A:40 A:89 23.0 0.307 T 92.1 -14.4 23.0 0.307 0.0
GLY B:40 B:89 29.0 0.387 T 93.1 3.6 29.0 0.387 0.0 SO4
 2.345
 N
 O4
4hq0 1 P55210 97.34 0.0 X-RAY
 2013-09-11 GLY A:44 A:89 7.0 0.093 T 129.7 -32.3 7.0 0.093 0.0
GLY B:44 B:89 11.0 0.147 T 102.6 -12.8 11.0 0.147 0.0
4hqr 1 P55210 97.34 0.0 X-RAY
 2013-09-11 GLY A:44 A:89 7.0 0.093 T 116.9 -24.3 7.0 0.093 0.0
GLY B:44 B:89 6.0 0.08 T 120.5 -24.1 6.0 0.08 0.0
1k86 1 P55210 99.6 0.0 X-RAY
 2001-11-21 GLY A:39 A:89 9.0 0.12 T 86.2 -18.4 9.0 0.12 0.0 HOH
 8.784
 N
 O
GLY B:39 B:89 12.0 0.16 T 111.2 -11.4 12.0 0.16 0.0 HOH
 3.148
 N
 O
3h1p 1 P55210 99.21 0.0 X-RAY
 2009-06-30 GLY A:40 A:89 8.0 0.107 T 94.7 -23.9 8.0 0.107 0.0 HOH
 3.140
 N
 O
GLY B:40 B:89 8.0 0.107 T 100.7 -14.4 8.0 0.107 0.0 HOH
 3.141
 N
 O
1k88 1 P55210 99.21 0.0 X-RAY
 2001-11-21 GLY A:39 A:89 10.0 0.133 T 90.0 -9.8 10.0 0.133 0.0 HOH
 2.873
 N
 O
GLY B:39 B:89 12.0 0.16 T 105.1 -19.1 12.0 0.16 0.0 HOH
 2.853
 N
 O
4fea 1 P55210 100.0 0.0 X-RAY
 2012-08-01 GLY A:33 NA:NA DO NA DO DO DO NA NA NA
GLY B:33 B:89 14.0 0.187 T 76.6 -1.7 14.0 0.187 0.0
4jj8 1 P55210 100.0 0.0 X-RAY
 2013-06-12 GLY A:33 A:89 12.0 0.16 T 104.6 -11.6 12.0 0.16 0.0 HOH
 2.813
 N
 O
GLY B:33 B:89 6.0 0.08 T 105.7 -11.2 NA NA NA
4jr1 1 P55210 99.6 0.0 X-RAY
 2013-05-08 GLY A:36 A:89 6.0 0.08 T 102.2 -12.1 6.0 0.08 0.0 CL
HOH
 2.761
5.119
 N
O
 CL
O
GLY B:36 B:89 8.0 0.107 T 105.8 -13.0 8.0 0.107 0.0 CL
HOH
 2.734
4.904
 N
O
 CL
O
4jr2 1 P55210 99.6 0.0 X-RAY
 2013-05-08 GLY A:36 A:89 13.0 0.173 T 101.9 -19.7 13.0 0.173 0.0 CL
HOH
 3.150
3.576
 N
CA
 CL
O
GLY B:36 B:89 9.0 0.12 T 104.5 -20.6 9.0 0.12 0.0 CL
HOH
 3.097
3.268
 N
CA
 CL
O
1shl 1 P55210 95.55 1e-177 X-RAY
 2004-08-17 GLY A:33 A:89 29.0 0.387 T 90.9 -14.9 29.0 0.387 0.0
GLY B:33 B:89 33.0 0.44 T 94.5 -15.0 33.0 0.44 0.0
4zvo 1 P55210 100.0 1e-146 X-RAY
 2016-04-20 GLY A:89 A:89 44.0 0.587 T 110.0 -22.9 8.0 0.107 0.48 B:P55210:0.48
GLY C:89 C:389 45.0 0.6 T 110.5 -23.4 7.0 0.093 0.507 D:P55210:0.507
4zvp 1 P55210 100.0 1e-146 X-RAY
 2016-04-20 GLY A:89 A:89 48.0 0.64 T 100.8 -18.5 12.0 0.16 0.48 B:P55210:0.48
 HOH
 2.991
 N
 O
GLY C:89 C:389 50.0 0.667 T 101.0 -17.4 12.0 0.16 0.507 D:P55210:0.507
 HOH
 2.581
 N
 O
4zvq 1 P55210 100.0 1e-146 X-RAY
 2016-04-20 GLY A:89 A:89 46.0 0.613 T 101.5 -17.8 12.0 0.16 0.453 B:P55210:0.453
 HOH
 3.055
 N
 O
GLY C:89 C:389 46.0 0.613 T 101.6 -17.5 12.0 0.16 0.453 D:P55210:0.453
 HOH
 3.035
 N
 O
4zvr 1 P55210 100.0 1e-146 X-RAY
 2016-04-20 GLY A:89 A:89 48.0 0.64 T 105.8 -21.2 9.0 0.12 0.52 B:P55210:0.52
 HOH
 3.131
 N
 O
GLY C:89 C:389 48.0 0.64 T 105.1 -20.8 9.0 0.12 0.52 D:P55210:0.52
 HOH
 2.957
 N
 O
4zvs 1 P55210 100.0 1e-146 X-RAY
 2016-04-20 GLY A:89 A:89 46.0 0.613 T 107.0 -17.3 11.0 0.147 0.466 B:P55210:0.467
 HOH
 2.904
 N
 O
GLY C:89 C:389 43.0 0.573 T 107.0 -17.2 10.0 0.133 0.44 D:P55210:0.44
 HOH
 2.916
 N
 O
4zvt 1 P55210 100.0 1e-146 X-RAY
 2016-04-20 GLY A:89 A:89 40.0 0.533 T 99.9 -19.2 8.0 0.107 0.426 B:P55210:0.427
 HOH
 2.866
 N
 O
GLY C:89 C:389 41.0 0.547 T 100.2 -19.0 8.0 0.107 0.44 D:P55210:0.44
 HOH
 2.998
 N
 O
4zvu 1 P55210 100.0 1e-146 X-RAY
 2016-04-20 GLY A:89 A:89 46.0 0.613 T 100.6 -17.0 10.0 0.133 0.48 B:P55210:0.48
 HOH
 2.994
 N
 O
GLY C:89 C:389 46.0 0.613 T 101.8 -16.8 10.0 0.133 0.48 D:P55210:0.48
 HOH
 2.893
 N
 O
5ic6 1 P55210 100.0 1e-146 X-RAY
 2016-07-20 GLY A:89 A:89 39.0 0.52 T 113.9 -14.8 9.0 0.12 0.4 B:P55210:0.4
GLY C:89 C:89 38.0 0.507 T 113.2 -14.1 NA NA NA
5k20 1 P55210 100.0 1e-146 X-RAY
 2017-01-11 GLY A:89 A:89 39.0 0.52 T 89.2 -16.3 19.0 0.253 0.267 B:P55210:0.267
 FMT
 3.114
 CA
 O2
GLY C:89 C:389 27.0 0.36 T 91.5 -16.9 7.0 0.093 0.267 D:P55210:0.267
 FMT
HOH
 3.009
5.092
 N
O
 O2
O
6cl1 1 P55210 100.0 1e-146 X-RAY
 2019-03-06 GLY A:89 A:89 43.0 0.573 T 89.6 -19.2 10.0 0.133 0.44 B:P55210:0.44
GLY C:89 C:89 37.0 0.493 T 93.0 -19.9 6.0 0.08 0.413 D:P55210:0.413
6cl2 1 P55210 100.0 1e-146 X-RAY
 2019-03-06 GLY A:89 A:89 41.0 0.547 T 94.1 -14.9 9.0 0.12 0.427 B:P55210:0.427
 HOH
 3.104
 N
 O
GLY C:89 C:89 43.0 0.573 T 99.9 -11.9 8.0 0.107 0.466 D:P55210:0.467
 HOH
 3.180
 N
 O
6x8j 1 P55210 100.0 1e-146 X-RAY
 2021-06-02 GLY A:89 A:89 43.0 0.573 T 105.9 -19.1 11.0 0.147 0.426 B:P55210:0.427
 HOH
 2.971
 N
 O
GLY C:89 B:89 42.0 0.56 T 105.2 -19.7 11.0 0.147 0.413 D:P55210:0.413
6x8l 1 P55210 100.0 1e-146 X-RAY
 2021-06-02 GLY A:89 A:89 46.0 0.613 T 100.9 -18.5 11.0 0.147 0.466 B:P55210:0.467
 HOH
 2.999
 N
 O
GLY C:89 B:89 43.0 0.573 T 97.9 -21.8 9.0 0.12 0.453 D:P55210:0.453
 HOH
 3.145
 N
 O
4jb8 1 P55210 100.0 1e-128 X-RAY
 2013-08-21 GLY A:66 A:89 41.0 0.547 T 103.6 -18.3 10.0 0.133 0.414 B:P55210:0.413
 HOH
 3.836
 CA
 O
4lsz 1 P55210 100.0 1e-128 X-RAY
 2014-07-02 GLY A:66 A:89 41.0 0.547 T 98.3 -14.0 10.0 0.133 0.414 B:P55210:0.413
 HOH
 5.053
 O
 O
GLY C:66 C:89 43.0 0.573 T 98.1 -14.2 11.0 0.147 0.426 D:P55210:0.427
 HOH
 3.034
 N
 O
2ql5 1 P55210 100.0 4e-127 X-RAY
 2007-08-28 GLY A:66 A:89 42.0 0.56 T 92.9 -17.0 9.0 0.12 0.44 B:P55210:0.44
 HOH
 3.053
 N
 O
GLY C:66 C:389 41.0 0.547 T 101.2 -5.4 11.0 0.147 0.4 D:P55210:0.4
 HOH
 3.046
 N
 O
2ql7 1 P55210 100.0 4e-127 X-RAY
 2007-08-28 GLY A:66 A:89 44.0 0.587 T 96.6 -16.2 11.0 0.147 0.44 B:P55210:0.44
 HOH
 2.903
 N
 O
GLY C:66 C:389 40.0 0.533 T 107.7 -17.2 10.0 0.133 0.4 D:P55210:0.4
 HOH
 3.137
 N
 O
2ql9 1 P55210 100.0 4e-127 X-RAY
 2007-08-28 GLY A:66 A:89 41.0 0.547 T 101.9 -15.0 9.0 0.12 0.427 B:P55210:0.427
 HOH
 2.816
 N
 O
GLY C:66 C:389 45.0 0.6 T 101.3 -9.2 12.0 0.16 0.44 D:P55210:0.44
 HOH
 2.863
 N
 O
2qlb 1 P55210 100.0 4e-127 X-RAY
 2007-08-28 GLY A:66 A:89 45.0 0.6 T 98.9 -19.4 13.0 0.173 0.427 B:P55210:0.427
 HOH
 3.046
 N
 O
GLY C:66 C:389 39.0 0.52 T 102.4 -14.9 10.0 0.133 0.387 D:P55210:0.387
 HOH
 3.106
 N
 O
2qlf 1 P55210 100.0 4e-127 X-RAY
 2007-08-28 GLY A:66 A:89 45.0 0.6 T 81.0 -7.9 16.0 0.213 0.387 B:P55210:0.387
 HOH
 2.960
 N
 O
GLY C:66 C:389 43.0 0.573 T 102.5 -12.2 11.0 0.147 0.426 D:P55210:0.427
 HOH
 2.719
 N
 O
2qlj 1 P55210 100.0 4e-127 X-RAY
 2007-08-28 GLY A:66 A:89 40.0 0.533 T 92.0 -12.2 9.0 0.12 0.413 B:P55210:0.413
 HOH
 3.042
 N
 O
GLY C:66 C:389 38.0 0.507 T 97.1 -10.3 7.0 0.093 0.414 D:P55210:0.413
 HOH
 3.084
 N
 O
3edr 1 P55210 100.0 4e-127 X-RAY
 2008-10-28 GLY A:66 A:89 46.0 0.613 T 88.8 -10.7 13.0 0.173 0.44 B:P55210:0.44
 HOH
 2.772
 N
 O
GLY C:66 C:389 37.0 0.493 T 104.8 -11.0 8.0 0.107 0.386 D:P55210:0.387
 HOH
 2.976
 N
 O
3ibc 1 P55210 100.0 4e-127 X-RAY
 2009-09-01 GLY A:66 A:89 37.0 0.493 T 99.9 -17.8 8.0 0.107 0.386 B:P55210:0.387
 HOH
 2.747
 N
 O
GLY C:66 C:389 40.0 0.533 T 97.1 -2.1 8.0 0.107 0.426 D:P55210:0.427
 HOH
 3.338
 N
 O
3ibf 1 P55210 100.0 4e-127 X-RAY
 2009-09-01 GLY A:66 A:89 39.0 0.52 T 87.6 -12.1 10.0 0.133 0.387 B:P55210:0.387
 HOH
 2.887
 N
 O
GLY C:66 C:389 41.0 0.547 T 103.7 -12.4 9.0 0.12 0.427 D:P55210:0.427
 HOH
 2.962
 N
 O
1i51 1 P55210 99.32 6e-107 X-RAY
 2002-02-23 GLY A:39 A:89 37.0 0.493 T 99.0 0.8 9.0 0.12 0.373 B:P55210:0.373
GLY C:39 C:89 40.0 0.533 T 108.1 -9.6 7.0 0.093 0.44 D:P55210:0.44

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55210-f1 1 P55210 100.0 0.0 GLY A:89 A:89 9.0 0.12 T 88.0 -15.6