Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 123310895 . C A CCDS53584.1:NM_001144915.1:c.266cGc>cTc_NP_001138387.1:p.89R>L Homo sapiens fibroblast growth factor receptor 2 (FGFR2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4j23 1 P21802 99.55 2e-161 X-RAY
 2014-02-19 ARG A:33 A:178 81.0 0.36 E -105.2 145.8 81.0 0.36 0.0
1ev2 2 P21802 100.0 3e-161 X-RAY
 2000-05-31 ARG E:32 E:178 93.0 0.413 E -130.4 148.8 93.0 0.413 0.0 HOH
 2.878
 N
 O
ARG F:32 F:178 95.0 0.422 E -131.5 147.3 95.0 0.422 0.0 HOH
 3.173
 N
 O
ARG G:32 G:178 81.0 0.36 E -129.9 148.5 81.0 0.36 0.0 HOH
 3.309
 NH1
 O
ARG H:32 H:178 103.0 0.458 E -131.5 147.9 103.0 0.458 0.0 HOH
 9.562
 O
 O
1e0o 2 P21802 100.0 2e-160 X-RAY
 2000-10-23 ARG B:31 B:178 49.0 0.218 E -130.5 145.1 49.0 0.218 0.0 IDS
SGN
IDS
HOH
 6.867
3.302
6.047
3.369
 NH2
CD
NH1
NH2
 O2S
O2S
O6A
O
ARG D:31 D:178 82.0 0.364 E -124.6 139.6 82.0 0.364 0.0 SO4
SO4
HOH
 3.470
3.390
2.782
 NH2
NH1
N
 O3
O2
O
1iil 2 P21802 99.55 4e-160 X-RAY
 2001-05-09 ARG E:32 E:178 84.0 0.373 E -129.7 143.6 84.0 0.373 0.0
ARG F:32 F:178 79.0 0.351 E -129.8 143.4 NA NA NA
ARG G:32 G:178 49.0 0.218 E -130.1 144.3 NA NA NA
ARG H:32 H:178 47.0 0.209 E -130.1 144.2 NA NA NA
2fdb 2 Q9UQH9 99.55 4e-160 X-RAY
 2006-02-07 ARG B:30 P:2178 86.0 0.382 E -127.2 144.0 86.0 0.382 0.0 HOH
 9.688
 O
 O
ARG D:30 R:3178 21.0 NA E -127.5 145.1 NA NA NA
1ii4 2 P21802 99.55 6e-160 X-RAY
 2001-05-09 ARG E:32 E:178 85.0 0.378 E -122.1 146.4 85.0 0.378 0.0
ARG F:32 F:178 87.0 0.387 E -121.3 145.3 NA NA NA
ARG G:32 G:178 89.0 0.396 E -120.5 146.7 NA NA NA
ARG H:32 H:178 89.0 0.396 E -121.3 145.7 NA NA NA
1djs 1 P21802 100.0 4e-153 X-RAY
 2000-01-12 ARG A:32 A:178 81.0 0.36 E -114.5 148.0 60.0 0.267 0.093 A:P21802:0.093
 SO4
SO4
SO4
HOH
 5.253
5.757
2.423
2.720
 NH1
NH1
NH2
N
 O4
O3
O2
O
1nun 2 P21802 88.36 1e-145 X-RAY
 2003-02-11 ARG B:39 B:178 73.0 0.324 E -138.4 154.4 73.0 0.324 0.0
3oj2 2 P21802 87.93 1e-144 X-RAY
 2011-08-31 ARG C:40 C:178 91.0 0.404 E -132.5 154.0 91.0 0.404 0.0 HOH
 6.491
 NH2
 O
ARG D:40 D:178 112.0 0.498 E -131.8 153.0 NA NA NA
3ojm 2 P21802 87.93 1e-144 X-RAY
 2011-08-31 ARG B:40 B:178 62.0 0.276 E -140.6 149.1 62.0 0.276 0.0 HOH
 5.837
 O
 O
3dar 1 P21802 100.0 7e-70 X-RAY
 2008-06-10 ARG A:34 A:178 43.0 NA E -131.7 147.1 43.0 NA NA HOH
 3.072
 N
 O
ARG B:34 B:178 54.0 NA E -133.1 147.7 NA NA NA
3caf 1 P21802 100.0 4e-67 X-RAY
 2009-01-27 ARG A:29 A:178 94.0 0.418 E -130.4 150.0 94.0 0.418 0.0 HOH
 3.070
 N
 O
3cu1 1 P21802 100.0 4e-67 X-RAY
 2009-04-21 ARG A:29 A:178 79.0 0.351 E -129.5 150.4 79.0 0.351 0.0 HOH
 3.033
 N
 O
ARG C:29 C:178 72.0 0.32 E -129.7 153.9 46.0 0.204 0.116 A:P21802:0.116
 GU4
YYJ
HOH
 3.339
3.213
2.718
 NH1
NH1
N
 O28
O1S3
O
3euu 1 P21802 100.0 4e-67 X-RAY
 2009-08-25 ARG A:29 A:178 78.0 0.347 E -138.9 141.1 78.0 0.347 0.0 HOH
 3.079
 N
 O
ARG B:29 B:178 79.0 0.351 E -127.0 147.8 NA NA NA
4wv1 1 P21802 100.0 2e-66 X-RAY
 2015-09-16 ARG A:26 F:175 137.0 0.609 E -115.3 149.1 20.0 0.089 0.52 F:None:0.187
D:None:0.378
 HOH
 3.624
 NH2
 O
ARG B:26 C:175 133.0 0.591 E -115.4 148.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21802-f1 1 P21802 100.0 0.0 ARG A:178 A:178 107.0 0.476 E -136.7 136.0