Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 126086581 | . | G | A | CCDS7639.1:NM_000274.3:c.1250cCg>cTg_NP_000265.1:p.417P>L | Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-04-01 | PRO | A:417 | A:417 | 0.0 | 0.0 | -49.2 | 144.6 | 0.0 | 0.0 | 0.0 |
HOH |
6.781 |
CB |
O |
|||
| PRO | B:417 | B:417 | 0.0 | 0.0 | -49.3 | 146.1 | 0.0 | 0.0 | 0.0 |
HOH |
6.823 |
CB |
O |
||||||||||
| PRO | C:417 | C:417 | 0.0 | 0.0 | -48.1 | 147.0 | NA | NA | NA | ||||||||||||||
| 2oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-12-09 | PRO | A:417 | A:417 | 0.0 | 0.0 | -49.9 | 152.1 | NA | NA | NA | |||||||
| PRO | B:417 | B:417 | 0.0 | 0.0 | -54.7 | 145.4 | NA | NA | NA | ||||||||||||||
| PRO | C:417 | C:417 | 0.0 | 0.0 | -53.1 | 146.9 | 0.0 | 0.0 | 0.0 |
HOH |
6.599 |
CB |
O |
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| 2byj | 1 | P04181 | 99.77 | 0.0 |
X-RAY |
2005-09-07 | PRO | A:417 | A:417 | 0.0 | 0.0 | -54.5 | 151.4 | 0.0 | 0.0 | 0.0 |
HOH |
7.254 |
CG |
O |
|||
| PRO | B:417 | B:417 | 0.0 | 0.0 | -54.4 | 152.2 | 0.0 | 0.0 | 0.0 |
HOH |
9.643 |
CA |
O |
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| PRO | C:417 | C:417 | 0.0 | 0.0 | -55.8 | 150.8 | NA | NA | NA | ||||||||||||||
| 2byl | 1 | P04181 | 99.32 | 0.0 |
X-RAY |
2005-09-07 | PRO | A:417 | A:417 | 0.0 | 0.0 | -56.9 | 152.6 | 0.0 | 0.0 | 0.0 |
HOH |
6.422 |
CB |
O |
|||
| PRO | B:417 | B:417 | 0.0 | 0.0 | -56.9 | 153.3 | 0.0 | 0.0 | 0.0 |
HOH |
6.556 |
CB |
O |
||||||||||
| PRO | C:417 | C:417 | 0.0 | 0.0 | -57.4 | 144.8 | NA | NA | NA | ||||||||||||||
| 6hx7 | 1 | P04181 | 99.76 | 0.0 |
X-RAY |
2019-06-05 | PRO | A:393 | A:417 | 0.0 | 0.0 | -60.7 | 151.2 | 0.0 | 0.0 | 0.0 |
HOH |
3.686 |
CD |
O |
|||
| PRO | B:393 | B:417 | 0.0 | 0.0 | -59.9 | 149.2 | NA | NA | NA | ||||||||||||||
| PRO | C:393 | C:417 | 0.0 | 0.0 | -59.1 | 149.7 | NA | NA | NA | ||||||||||||||
| 5vwo | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2017-08-30 | PRO | A:382 | A:417 | 0.0 | 0.0 | -60.3 | 153.1 | 0.0 | 0.0 | 0.0 |
HOH |
6.342 |
CB |
O |
|||
| PRO | B:382 | B:417 | 0.0 | 0.0 | -56.2 | 150.5 | 0.0 | 0.0 | 0.0 |
HOH |
3.774 |
CD |
O |
||||||||||
| PRO | C:382 | C:417 | 0.0 | 0.0 | -58.5 | 147.2 | 0.0 | 0.0 | 0.0 |
HOH |
6.393 |
CB |
O |
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| 6oia | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2019-09-18 | PRO | A:382 | A:417 | 0.0 | 0.0 | -58.9 | 147.5 | 0.0 | 0.0 | 0.0 |
HOH |
3.876 |
CD |
O |
|||
| PRO | B:382 | B:417 | 0.0 | 0.0 | -61.1 | 149.9 | 0.0 | 0.0 | 0.0 |
HOH |
3.733 |
CD |
O |
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| PRO | C:382 | C:417 | 0.0 | 0.0 | -62.7 | 147.5 | NA | NA | NA | ||||||||||||||
| 6v8c | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | PRO | A:382 | A:417 | 0.0 | 0.0 | -60.1 | 147.5 | 0.0 | 0.0 | 0.0 |
HOH |
3.519 |
CD |
O |
|||
| PRO | B:382 | B:417 | 0.0 | 0.0 | -58.3 | 148.2 | NA | NA | NA | ||||||||||||||
| PRO | C:382 | C:417 | 0.0 | 0.0 | -60.2 | 147.1 | NA | NA | NA | ||||||||||||||
| 6v8d | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | PRO | A:382 | A:417 | 0.0 | 0.0 | -60.1 | 149.6 | 0.0 | 0.0 | 0.0 |
HOH |
6.546 |
CB |
O |
|||
| PRO | B:382 | B:417 | 0.0 | 0.0 | -56.1 | 145.8 | 0.0 | 0.0 | 0.0 |
HOH |
6.524 |
CB |
O |
||||||||||
| PRO | C:382 | C:417 | 0.0 | 0.0 | -61.6 | 146.6 | NA | NA | NA | ||||||||||||||
| 7jx9 | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-01-06 | PRO | A:382 | A:417 | 0.0 | 0.0 | -57.1 | 146.9 | 0.0 | 0.0 | 0.0 |
HOH |
7.247 |
CB |
O |
|||
| PRO | B:382 | B:417 | 0.0 | 0.0 | -61.6 | 148.8 | NA | NA | NA | ||||||||||||||
| PRO | C:382 | C:417 | 0.0 | 0.0 | -60.5 | 147.2 | NA | NA | NA | ||||||||||||||
| 7lnm | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | PRO | A:382 | B:417 | 0.0 | 0.0 | -59.4 | 150.0 | 0.0 | 0.0 | 0.0 |
HOH |
6.742 |
CB |
O |
|||
| PRO | B:382 | C:417 | 0.0 | 0.0 | -58.9 | 147.3 | 0.0 | 0.0 | 0.0 |
HOH |
6.528 |
CB |
O |
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| PRO | C:382 | E:417 | 0.0 | 0.0 | -58.7 | 148.8 | NA | NA | NA | ||||||||||||||
| PRO | D:382 | F:417 | 0.0 | 0.0 | -58.9 | 147.3 | NA | NA | NA | ||||||||||||||
| PRO | E:382 | I:417 | 0.0 | 0.0 | -61.9 | 150.3 | NA | NA | NA | ||||||||||||||
| PRO | F:382 | J:417 | 0.0 | 0.0 | -62.0 | 150.6 | NA | NA | NA | ||||||||||||||
| 7lom | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | PRO | A:382 | A:417 | 0.0 | 0.0 | -60.8 | 146.0 | 0.0 | 0.0 | 0.0 |
HOH |
6.314 |
CB |
O |
|||
| PRO | B:382 | B:417 | 0.0 | 0.0 | -58.1 | 151.4 | NA | NA | NA | ||||||||||||||
| PRO | C:382 | C:417 | 0.0 | 0.0 | -57.0 | 149.5 | NA | NA | NA | ||||||||||||||
| 7lon | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | PRO | A:382 | B:417 | 0.0 | 0.0 | -58.1 | 149.2 | 0.0 | 0.0 | 0.0 |
HOH |
6.384 |
CB |
O |
|||
| PRO | B:382 | A:417 | 0.0 | 0.0 | -59.2 | 149.4 | NA | NA | NA | ||||||||||||||
| PRO | C:382 | C:417 | 0.0 | 0.0 | -60.0 | 149.7 | NA | NA | NA | ||||||||||||||
| 1gbn | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | PRO | A:380 | A:417 | 0.0 | 0.0 | -47.1 | 140.4 | 0.0 | 0.0 | 0.0 |
HOH |
6.537 |
CB |
O |
|||
| PRO | B:380 | B:417 | 0.0 | 0.0 | -46.9 | 141.7 | 0.0 | 0.0 | 0.0 |
HOH |
6.814 |
CB |
O |
||||||||||
| PRO | C:380 | C:417 | 0.0 | 0.0 | -47.0 | 140.8 | 0.0 | 0.0 | 0.0 |
HOH |
7.082 |
CG |
O |
||||||||||
| 2can | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | PRO | A:380 | A:417 | 0.0 | 0.0 | -49.8 | 140.4 | 0.0 | 0.0 | 0.0 |
HOH |
6.692 |
CB |
O |
|||
| PRO | B:380 | B:417 | 0.0 | 0.0 | -50.3 | 140.3 | 0.0 | 0.0 | 0.0 |
HOH |
7.547 |
CG |
O |
||||||||||
| PRO | C:380 | C:417 | 0.0 | 0.0 | -50.7 | 140.0 | NA | NA | NA | ||||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p04181-f1 | 1 | P04181 | 100.0 | 0.0 | PRO | A:417 | A:417 | 0.0 | 0.0 | -59.7 | 146.0 | ||