Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 126086630 . C A CCDS7639.1:NM_000274.3:c.1201Gga>Tga_NP_000265.1:p.401G>* Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1oat 1 P04181 100.0 0.0 X-RAY
 1998-04-01 GLY A:401 A:401 17.0 0.227 T 91.9 17.9 17.0 0.227 0.0 HOH
 9.227
 CA
 O
GLY B:401 B:401 14.0 0.187 T 93.3 15.2 14.0 0.187 0.0 HOH
 3.930
 CA
 O
GLY C:401 C:401 16.0 0.213 T 93.5 16.4 NA NA NA
2oat 1 P04181 100.0 0.0 X-RAY
 1998-12-09 GLY A:401 A:401 15.0 0.2 T 87.2 17.4 NA NA NA
GLY B:401 B:401 16.0 0.213 T 92.9 18.0 NA NA NA
GLY C:401 C:401 16.0 0.213 T 81.8 23.0 16.0 0.213 0.0 HOH
 4.105
 N
 O
2byj 1 P04181 99.77 0.0 X-RAY
 2005-09-07 GLY A:401 A:401 15.0 0.2 T 97.1 28.0 15.0 0.2 0.0
GLY B:401 B:401 15.0 0.2 T 97.1 27.8 15.0 0.2 0.0
GLY C:401 C:401 14.0 0.187 T 97.0 28.1 NA NA NA
2byl 1 P04181 99.32 0.0 X-RAY
 2005-09-07 GLY A:401 A:401 17.0 0.227 T 88.0 28.1 17.0 0.227 0.0 HOH
 6.859
 C
 O
GLY B:401 B:401 17.0 0.227 T 90.4 20.5 17.0 0.227 0.0 HOH
 3.845
 CA
 O
GLY C:401 C:401 16.0 0.213 T 88.2 24.7 NA NA NA
6hx7 1 P04181 99.76 0.0 X-RAY
 2019-06-05 GLY A:377 A:401 15.0 0.2 T 95.9 27.0 15.0 0.2 0.0 HOH
 3.584
 CA
 O
GLY B:377 B:401 13.0 0.173 T 95.5 25.1 NA NA NA
GLY C:377 C:401 16.0 0.213 T 95.6 25.9 NA NA NA
5vwo 1 P04181 100.0 0.0 X-RAY
 2017-08-30 GLY A:366 A:401 15.0 0.2 T 98.4 20.7 15.0 0.2 0.0 HOH
 6.838
 CA
 O
GLY B:366 B:401 17.0 0.227 T 91.3 25.2 17.0 0.227 0.0 HOH
 3.694
 O
 O
GLY C:366 C:401 15.0 0.2 T 86.9 24.6 15.0 0.2 0.0 HOH
 3.927
 CA
 O
6oia 1 P04181 100.0 0.0 X-RAY
 2019-09-18 GLY A:366 A:401 18.0 0.24 T 87.9 26.4 18.0 0.24 0.0 HOH
 3.543
 CA
 O
GLY B:366 B:401 16.0 0.213 T 94.2 24.9 16.0 0.213 0.0 HOH
 3.048
 O
 O
GLY C:366 C:401 15.0 0.2 T 94.4 19.4 NA NA NA
6v8c 1 P04181 100.0 0.0 X-RAY
 2020-12-16 GLY A:366 A:401 15.0 0.2 T 97.1 20.3 15.0 0.2 0.0 HOH
 3.761
 CA
 O
GLY B:366 B:401 14.0 0.187 T 96.5 19.6 NA NA NA
GLY C:366 C:401 15.0 0.2 T 97.2 19.6 NA NA NA
6v8d 1 P04181 100.0 0.0 X-RAY
 2020-12-16 GLY A:366 A:401 15.0 0.2 T 95.1 23.7 15.0 0.2 0.0 HOH
 3.659
 O
 O
GLY B:366 B:401 14.0 0.187 T 89.5 28.4 14.0 0.187 0.0 HOH
 6.547
 CA
 O
GLY C:366 C:401 13.0 0.173 T 91.7 25.5 NA NA NA
7jx9 1 P04181 100.0 0.0 X-RAY
 2021-01-06 GLY A:366 A:401 17.0 0.227 T 93.5 20.5 17.0 0.227 0.0 HOH
 4.478
 CA
 O
GLY B:366 B:401 16.0 0.213 T 92.6 23.4 NA NA NA
GLY C:366 C:401 15.0 0.2 T 96.2 22.6 NA NA NA
7lnm 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLY A:366 B:401 16.0 0.213 T 91.2 23.2 16.0 0.213 0.0 HOH
 3.733
 CA
 O
GLY B:366 C:401 16.0 0.213 T 92.2 23.7 16.0 0.213 0.0 HOH
 3.893
 CA
 O
GLY C:366 E:401 16.0 0.213 T 94.3 22.7 NA NA NA
GLY D:366 F:401 16.0 0.213 T 87.6 29.5 NA NA NA
GLY E:366 I:401 14.0 0.187 T 95.9 22.7 NA NA NA
GLY F:366 J:401 14.0 0.187 T 96.1 22.4 NA NA NA
7lom 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLY A:366 A:401 14.0 0.187 T 94.8 26.7 14.0 0.187 0.0 HOH
 3.424
 O
 O
GLY B:366 B:401 13.0 0.173 T 94.3 27.2 NA NA NA
GLY C:366 C:401 14.0 0.187 T 89.8 24.0 NA NA NA
7lon 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLY A:366 B:401 15.0 0.2 T 93.5 26.0 15.0 0.2 0.0 HOH
 5.949
 N
 O
GLY B:366 A:401 13.0 0.173 T 95.0 27.1 NA NA NA
GLY C:366 C:401 16.0 0.213 T 93.0 27.1 NA NA NA
1gbn 1 P04181 100.0 0.0 X-RAY
 1998-06-03 GLY A:364 A:401 16.0 0.213 T 88.6 20.0 16.0 0.213 0.0 HOH
 3.971
 CA
 O
GLY B:364 B:401 17.0 0.227 T 89.2 19.7 17.0 0.227 0.0 HOH
 6.849
 C
 O
GLY C:364 C:401 16.0 0.213 T 88.7 19.5 16.0 0.213 0.0 HOH
 6.998
 C
 O
2can 1 P04181 100.0 0.0 X-RAY
 1998-06-03 GLY A:364 A:401 16.0 0.213 T 98.7 21.8 16.0 0.213 0.0 HOH
 3.558
 H
 O
GLY B:364 B:401 17.0 0.227 T 98.1 21.3 17.0 0.227 0.0 HOH
 6.167
 H
 O
GLY C:364 C:401 17.0 0.227 T 97.4 21.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04181-f1 1 P04181 100.0 0.0 GLY A:401 A:401 15.0 0.2 T 90.1 23.5